EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000009461 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 3535 bases
Position: chrGeneScaffold_4065:6594-10128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000008915	APOBEC_N	PF08210.11	4.2e-44	1	1
ENSPVAP00000008915	APOBEC_C	PF05240.14	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009461	-	735	-	ENSPVAP00000008915	245 (aa)	-	UPI00018B109D

Gene Model

Click here to download ENSPVAG00000009461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000009461	-	53	39.552	ENSPVAG00000012185	AICDA	67	39.552
ENSPVAG00000009461	-	53	93.077	ENSPVAG00000024161	-	98	93.077
ENSPVAG00000009461	-	50	34.921	ENSPVAG00000008316	APOBEC2	56	34.921
ENSPVAG00000009461	-	53	97.692	ENSPVAG00000024267	-	98	97.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009461	-	71	49.593	ENSG00000128394	APOBEC3F	81	49.593	Homo_sapiens
ENSPVAG00000009461	-	50	50.000	ENSG00000244509	APOBEC3C	64	50.000	Homo_sapiens
ENSPVAG00000009461	-	71	44.715	ENSG00000243811	APOBEC3D	94	44.715	Homo_sapiens
ENSPVAG00000009461	-	73	48.062	ENSANAG00000030088	-	91	48.062	Aotus_nancymaae
ENSPVAG00000009461	-	52	48.837	ENSCJAG00000015317	-	98	48.837	Callithrix_jacchus
ENSPVAG00000009461	-	65	59.459	ENSCAFG00020002615	-	84	59.459	Canis_lupus_dingo
ENSPVAG00000009461	-	73	45.528	ENSTSYG00000034260	-	81	45.528	Carlito_syrichta
ENSPVAG00000009461	-	52	41.221	ENSTSYG00000030036	-	72	41.221	Carlito_syrichta
ENSPVAG00000009461	-	50	47.154	ENSTSYG00000028254	-	67	47.154	Carlito_syrichta
ENSPVAG00000009461	-	52	49.612	ENSCCAG00000030932	-	58	49.612	Cebus_capucinus
ENSPVAG00000009461	-	50	47.967	ENSCATG00000043226	APOBEC3C	94	47.967	Cercocebus_atys
ENSPVAG00000009461	-	71	50.407	ENSCATG00000033502	-	90	50.980	Cercocebus_atys
ENSPVAG00000009461	-	50	47.154	ENSCSAG00000006402	APOBEC3C	65	47.154	Chlorocebus_sabaeus
ENSPVAG00000009461	-	74	48.780	ENSCSAG00000006382	APOBEC3F	83	48.780	Chlorocebus_sabaeus
ENSPVAG00000009461	-	71	50.407	ENSCANG00000032904	-	81	50.407	Colobus_angolensis_palliatus
ENSPVAG00000009461	-	50	47.154	ENSCANG00000039177	APOBEC3C	65	47.154	Colobus_angolensis_palliatus
ENSPVAG00000009461	-	66	49.593	ENSCANG00000033269	-	78	49.593	Colobus_angolensis_palliatus
ENSPVAG00000009461	-	71	46.341	ENSCANG00000031957	-	81	46.341	Colobus_angolensis_palliatus
ENSPVAG00000009461	-	64	43.902	ENSDNOG00000044642	-	71	43.902	Dasypus_novemcinctus
ENSPVAG00000009461	-	70	49.593	ENSEASG00005018641	-	85	49.593	Equus_asinus_asinus
ENSPVAG00000009461	-	71	65.625	ENSECAG00000006071	-	91	65.625	Equus_caballus
ENSPVAG00000009461	-	71	49.593	ENSGGOG00000038678	APOBEC3F	81	49.593	Gorilla_gorilla
ENSPVAG00000009461	-	50	45.528	ENSGGOG00000036587	-	65	45.528	Gorilla_gorilla
ENSPVAG00000009461	-	72	43.820	ENSHGLG00000017315	-	76	43.820	Heterocephalus_glaber_female
ENSPVAG00000009461	-	72	45.528	ENSHGLG00100003105	-	77	45.528	Heterocephalus_glaber_male
ENSPVAG00000009461	-	71	51.220	ENSMFAG00000004037	APOBEC3F	81	51.220	Macaca_fascicularis
ENSPVAG00000009461	-	71	47.967	ENSMFAG00000016792	APOBEC3C	94	47.967	Macaca_fascicularis
ENSPVAG00000009461	-	71	48.333	ENSMFAG00000002331	-	80	48.333	Macaca_fascicularis
ENSPVAG00000009461	-	70	49.020	ENSMMUG00000004018	APOBEC3C	90	49.020	Macaca_mulatta
ENSPVAG00000009461	-	73	50.407	ENSMMUG00000004017	APOBEC3F	90	50.407	Macaca_mulatta
ENSPVAG00000009461	-	50	47.154	ENSMNEG00000045196	APOBEC3C	92	47.154	Macaca_nemestrina
ENSPVAG00000009461	-	71	50.407	ENSMNEG00000043316	APOBEC3D	81	50.407	Macaca_nemestrina
ENSPVAG00000009461	-	71	48.780	ENSMLEG00000036992	APOBEC3C	94	48.780	Mandrillus_leucophaeus
ENSPVAG00000009461	-	71	50.407	ENSMLEG00000029642	APOBEC3F	81	50.407	Mandrillus_leucophaeus
ENSPVAG00000009461	-	51	43.200	ENSMICG00000042615	-	60	43.200	Microcebus_murinus
ENSPVAG00000009461	-	72	46.212	ENSMLUG00000023676	-	99	46.212	Myotis_lucifugus
ENSPVAG00000009461	-	71	42.373	ENSNLEG00000035811	-	76	42.373	Nomascus_leucogenys
ENSPVAG00000009461	-	50	47.967	ENSNLEG00000028392	APOBEC3C	94	47.967	Nomascus_leucogenys
ENSPVAG00000009461	-	72	43.200	ENSOGAG00000032498	-	78	43.200	Otolemur_garnettii
ENSPVAG00000009461	-	68	40.120	ENSOGAG00000030300	-	77	40.120	Otolemur_garnettii
ENSPVAG00000009461	-	72	45.000	ENSOGAG00000033404	-	80	45.000	Otolemur_garnettii
ENSPVAG00000009461	-	71	44.715	ENSPPAG00000028218	-	93	44.715	Pan_paniscus
ENSPVAG00000009461	-	50	50.000	ENSPPAG00000014118	APOBEC3C	64	50.000	Pan_paniscus
ENSPVAG00000009461	-	71	52.000	ENSPPRG00000003726	-	93	52.000	Panthera_pardus
ENSPVAG00000009461	-	66	44.715	ENSPTRG00000041588	APOBEC3D	75	44.715	Pan_troglodytes
ENSPVAG00000009461	-	71	49.593	ENSPTRG00000014385	APOBEC3C	90	49.593	Pan_troglodytes
ENSPVAG00000009461	-	71	50.407	ENSPANG00000010775	APOBEC3F	94	49.593	Papio_anubis
ENSPVAG00000009461	-	50	47.967	ENSPPYG00000011832	APOBEC3C	65	47.967	Pongo_abelii
ENSPVAG00000009461	-	51	48.000	ENSPCOG00000018072	-	94	48.000	Propithecus_coquereli
ENSPVAG00000009461	-	51	44.800	ENSPCOG00000022067	-	95	44.800	Propithecus_coquereli
ENSPVAG00000009461	-	72	50.407	ENSRBIG00000042297	-	83	50.407	Rhinopithecus_bieti
ENSPVAG00000009461	-	72	50.407	ENSRBIG00000030323	-	92	49.020	Rhinopithecus_bieti
ENSPVAG00000009461	-	64	46.341	ENSRBIG00000030834	-	76	46.341	Rhinopithecus_bieti
ENSPVAG00000009461	-	64	46.341	ENSRROG00000028557	-	75	46.341	Rhinopithecus_roxellana
ENSPVAG00000009461	-	72	50.407	ENSRROG00000029045	APOBEC3C	92	49.020	Rhinopithecus_roxellana
ENSPVAG00000009461	-	71	50.407	ENSRROG00000029996	-	82	50.407	Rhinopithecus_roxellana
ENSPVAG00000009461	-	73	51.695	ENSSBOG00000032780	-	95	51.695	Saimiri_boliviensis_boliviensis
ENSPVAG00000009461	-	67	63.889	ENSUAMG00000004433	-	90	63.889	Ursus_americanus
ENSPVAG00000009461	-	67	64.865	ENSUMAG00000014441	-	76	64.865	Ursus_maritimus
ENSPVAG00000009461	-	50	62.162	ENSVVUG00000014628	-	76	61.111	Vulpes_vulpes