EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000009462 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 1489 bases
Position: chrGeneScaffold_4065:14030-15518
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000008916	APOBEC_N	PF08210.11	1.8e-38	1	1
ENSPVAP00000008916	APOBEC_C	PF05240.14	1.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009462	-	528	-	ENSPVAP00000008916	176 (aa)	-	UPI00018B109E

Gene Model

Click here to download ENSPVAG00000009462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000009462	-	99	35.196	ENSPVAG00000012185	AICDA	89	35.196
ENSPVAG00000009462	-	99	34.921	ENSPVAG00000004045	-	92	34.921
ENSPVAG00000009462	-	75	35.606	ENSPVAG00000024161	-	100	35.606
ENSPVAG00000009462	-	75	33.333	ENSPVAG00000024267	-	100	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009462	-	98	51.124	ENSG00000100298	APOBEC3H	98	51.124	Homo_sapiens
ENSPVAG00000009462	-	99	50.000	ENSAMEG00000010818	-	77	50.000	Ailuropoda_melanoleuca
ENSPVAG00000009462	-	98	51.099	ENSANAG00000025410	APOBEC3H	81	51.099	Aotus_nancymaae
ENSPVAG00000009462	-	99	57.386	ENSBTAG00000007755	APOBEC3H	88	57.386	Bos_taurus
ENSPVAG00000009462	-	98	51.685	ENSCJAG00000012524	APOBEC3H	89	52.174	Callithrix_jacchus
ENSPVAG00000009462	-	100	53.933	ENSCAFG00000001361	APOBEC3Z3	92	53.933	Canis_familiaris
ENSPVAG00000009462	-	100	52.247	ENSCAFG00020002584	-	92	52.247	Canis_lupus_dingo
ENSPVAG00000009462	-	99	58.523	ENSCHIG00000026580	-	91	58.523	Capra_hircus
ENSPVAG00000009462	-	98	56.069	ENSTSYG00000032894	-	100	56.069	Carlito_syrichta
ENSPVAG00000009462	-	100	56.000	ENSCPOG00000009257	-	85	56.000	Cavia_porcellus
ENSPVAG00000009462	-	99	50.000	ENSCCAG00000008525	APOBEC3H	90	51.408	Cebus_capucinus
ENSPVAG00000009462	-	98	50.562	ENSCATG00000030302	APOBEC3H	98	50.562	Cercocebus_atys
ENSPVAG00000009462	-	99	51.705	ENSCLAG00000016615	-	87	51.705	Chinchilla_lanigera
ENSPVAG00000009462	-	98	51.685	ENSCSAG00000006371	APOBEC3H	84	51.685	Chlorocebus_sabaeus
ENSPVAG00000009462	-	100	51.685	ENSCGRG00001022976	Apobec3	86	51.685	Cricetulus_griseus_chok1gshd
ENSPVAG00000009462	-	100	51.685	ENSCGRG00000005621	Apobec3	86	51.685	Cricetulus_griseus_crigri
ENSPVAG00000009462	-	99	55.000	ENSDORG00000027271	-	91	55.000	Dipodomys_ordii
ENSPVAG00000009462	-	99	60.227	ENSECAG00000007726	APOBEC3H	76	60.227	Equus_caballus
ENSPVAG00000009462	-	99	60.227	ENSFCAG00000005251	APOBEC3Z3	91	60.227	Felis_catus
ENSPVAG00000009462	-	99	53.409	ENSSTOG00000007125	-	85	53.409	Ictidomys_tridecemlineatus
ENSPVAG00000009462	-	100	51.825	ENSJJAG00000016840	-	83	51.825	Jaculus_jaculus
ENSPVAG00000009462	-	100	51.136	ENSLAFG00000027404	-	95	51.136	Loxodonta_africana
ENSPVAG00000009462	-	98	51.124	ENSMFAG00000031827	APOBEC3H	90	51.449	Macaca_fascicularis
ENSPVAG00000009462	-	98	52.247	ENSMMUG00000001016	APOBEC3H	90	52.899	Macaca_mulatta
ENSPVAG00000009462	-	98	51.685	ENSMNEG00000039259	APOBEC3H	90	52.174	Macaca_nemestrina
ENSPVAG00000009462	-	98	50.562	ENSMLEG00000033417	APOBEC3H	90	50.725	Mandrillus_leucophaeus
ENSPVAG00000009462	-	99	50.279	ENSMAUG00000011683	Apobec3	84	50.279	Mesocricetus_auratus
ENSPVAG00000009462	-	100	47.429	ENSMOCG00000021576	Apobec3	86	47.429	Microtus_ochrogaster
ENSPVAG00000009462	-	100	45.509	MGP_CAROLIEiJ_G0020029	Apobec3	98	40.964	Mus_caroli
ENSPVAG00000009462	-	100	48.765	ENSMUSG00000009585	Apobec3	94	47.368	Mus_musculus
ENSPVAG00000009462	-	99	49.444	MGP_PahariEiJ_G0020031	-	89	49.444	Mus_pahari
ENSPVAG00000009462	-	100	48.315	MGP_SPRETEiJ_G0020927	Apobec3	98	40.964	Mus_spretus
ENSPVAG00000009462	-	99	54.857	ENSMPUG00000013239	-	87	54.857	Mustela_putorius_furo
ENSPVAG00000009462	-	98	50.289	ENSNGAG00000018998	Apobec3	91	50.289	Nannospalax_galili
ENSPVAG00000009462	-	98	51.685	ENSNLEG00000015218	-	84	51.685	Nomascus_leucogenys
ENSPVAG00000009462	-	100	41.808	ENSOCUG00000023913	-	88	41.808	Oryctolagus_cuniculus
ENSPVAG00000009462	-	99	58.523	ENSOARG00000016290	APOBEC3F	91	58.523	Ovis_aries
ENSPVAG00000009462	-	98	50.562	ENSPPAG00000036522	APOBEC3H	97	50.562	Pan_paniscus
ENSPVAG00000009462	-	99	61.017	ENSPPRG00000003941	-	91	61.017	Panthera_pardus
ENSPVAG00000009462	-	99	34.615	ENSPPRG00000003675	-	93	34.615	Panthera_pardus
ENSPVAG00000009462	-	99	61.017	ENSPTIG00000010283	-	91	61.017	Panthera_tigris_altaica
ENSPVAG00000009462	-	98	50.562	ENSPTRG00000014390	APOBEC3H	97	50.562	Pan_troglodytes
ENSPVAG00000009462	-	98	53.933	ENSPANG00000010774	APOBEC3H	90	55.072	Papio_anubis
ENSPVAG00000009462	-	100	50.000	ENSPEMG00000000456	Apobec3	81	50.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000009462	-	98	52.247	ENSPPYG00000011834	-	84	52.247	Pongo_abelii
ENSPVAG00000009462	-	100	44.633	ENSPCAG00000015655	-	99	44.633	Procavia_capensis
ENSPVAG00000009462	-	99	49.721	ENSRNOG00000016852	Apobec3	85	49.721	Rattus_norvegicus
ENSPVAG00000009462	-	98	50.562	ENSRBIG00000029088	APOBEC3H	87	52.985	Rhinopithecus_bieti
ENSPVAG00000009462	-	98	50.562	ENSRROG00000024699	APOBEC3H	89	50.562	Rhinopithecus_roxellana
ENSPVAG00000009462	-	99	51.934	ENSSBOG00000030005	APOBEC3H	99	52.143	Saimiri_boliviensis_boliviensis
ENSPVAG00000009462	-	100	57.627	ENSSSCG00000000091	APOBEC3B	84	57.627	Sus_scrofa
ENSPVAG00000009462	-	95	50.595	ENSTBEG00000001532	-	99	50.595	Tupaia_belangeri
ENSPVAG00000009462	-	99	56.818	ENSTTRG00000001266	-	99	56.818	Tursiops_truncatus
ENSPVAG00000009462	-	99	52.174	ENSUAMG00000004427	-	83	52.174	Ursus_americanus
ENSPVAG00000009462	-	99	54.802	ENSUMAG00000014435	-	91	54.802	Ursus_maritimus
ENSPVAG00000009462	-	72	56.693	ENSVPAG00000011108	-	99	56.693	Vicugna_pacos
ENSPVAG00000009462	-	98	61.538	ENSVVUG00000014624	-	57	61.538	Vulpes_vulpes