EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000009478 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 16140 bases
Position: chrGeneScaffold_1745:21566-37705
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000008932	RTC	PF01137.21	9.8e-82	1	1
ENSPVAP00000008932	RTC_insert	PF05189.13	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009478	RTCA-201	1137	-	ENSPVAP00000008932	378 (aa)	-	UPI00018B2DAA

Gene Model

Click here to download ENSPVAG00000009478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009478	RTCA	100	92.876	ENSG00000137996	RTCA	98	95.833	Homo_sapiens
ENSPVAG00000009478	RTCA	99	67.647	ENSAPOG00000001345	rtca	98	67.647	Acanthochromis_polyacanthus
ENSPVAG00000009478	RTCA	71	93.680	ENSAMEG00000008855	RTCA	100	93.680	Ailuropoda_melanoleuca
ENSPVAG00000009478	RTCA	99	68.267	ENSACIG00000019643	rtca	99	68.267	Amphilophus_citrinellus
ENSPVAG00000009478	RTCA	100	67.018	ENSAOCG00000014979	rtca	99	67.018	Amphiprion_ocellaris
ENSPVAG00000009478	RTCA	100	67.018	ENSAPEG00000006945	rtca	99	67.018	Amphiprion_percula
ENSPVAG00000009478	RTCA	100	65.699	ENSATEG00000006315	rtca	100	65.699	Anabas_testudineus
ENSPVAG00000009478	RTCA	96	76.294	ENSAPLG00000015430	RTCA	100	76.294	Anas_platyrhynchos
ENSPVAG00000009478	RTCA	100	92.084	ENSANAG00000025446	RTCA	100	92.084	Aotus_nancymaae
ENSPVAG00000009478	RTCA	100	66.316	ENSACLG00000020770	rtca	99	66.316	Astatotilapia_calliptera
ENSPVAG00000009478	RTCA	100	68.602	ENSAMXG00000043271	rtca	100	68.602	Astyanax_mexicanus
ENSPVAG00000009478	RTCA	100	91.293	ENSBTAG00000006321	RTCA	100	91.293	Bos_taurus
ENSPVAG00000009478	RTCA	100	89.446	ENSCJAG00000003398	RTCA	100	89.446	Callithrix_jacchus
ENSPVAG00000009478	RTCA	100	91.821	ENSCAFG00000020010	RTCA	68	91.821	Canis_familiaris
ENSPVAG00000009478	RTCA	100	91.821	ENSCAFG00020011528	RTCA	57	91.821	Canis_lupus_dingo
ENSPVAG00000009478	RTCA	100	91.029	ENSCHIG00000018937	RTCA	100	91.029	Capra_hircus
ENSPVAG00000009478	RTCA	100	92.084	ENSTSYG00000011305	RTCA	100	92.084	Carlito_syrichta
ENSPVAG00000009478	RTCA	100	91.821	ENSCCAG00000021844	RTCA	100	91.821	Cebus_capucinus
ENSPVAG00000009478	RTCA	100	93.404	ENSCATG00000019364	RTCA	100	93.528	Cercocebus_atys
ENSPVAG00000009478	RTCA	84	93.375	ENSCLAG00000006125	RTCA	100	93.375	Chinchilla_lanigera
ENSPVAG00000009478	RTCA	100	90.501	ENSCSAG00000001509	RTCA	100	90.501	Chlorocebus_sabaeus
ENSPVAG00000009478	RTCA	100	89.446	ENSCHOG00000005211	RTCA	100	89.446	Choloepus_hoffmanni
ENSPVAG00000009478	RTCA	100	80.211	ENSCPBG00000026658	RTCA	100	80.211	Chrysemys_picta_bellii
ENSPVAG00000009478	RTCA	98	54.011	ENSCING00000007875	-	98	54.011	Ciona_intestinalis
ENSPVAG00000009478	RTCA	98	53.083	ENSCSAVG00000007269	-	98	53.083	Ciona_savignyi
ENSPVAG00000009478	RTCA	100	93.140	ENSCANG00000040106	RTCA	100	93.140	Colobus_angolensis_palliatus
ENSPVAG00000009478	RTCA	71	90.706	ENSCGRG00001013163	Rtca	85	90.706	Cricetulus_griseus_chok1gshd
ENSPVAG00000009478	RTCA	98	66.488	ENSCSEG00000000530	rtca	96	66.488	Cynoglossus_semilaevis
ENSPVAG00000009478	RTCA	100	56.992	ENSCVAG00000021809	rtca	100	56.992	Cyprinodon_variegatus
ENSPVAG00000009478	RTCA	100	69.393	ENSDARG00000002215	rtca	100	69.393	Danio_rerio
ENSPVAG00000009478	RTCA	100	89.710	ENSDNOG00000000456	RTCA	100	89.710	Dasypus_novemcinctus
ENSPVAG00000009478	RTCA	100	88.918	ENSDORG00000005448	Rtca	100	88.918	Dipodomys_ordii
ENSPVAG00000009478	RTCA	99	37.067	FBgn0025630	Rtca	99	37.067	Drosophila_melanogaster
ENSPVAG00000009478	RTCA	96	53.022	ENSEBUG00000008556	rtca	97	53.022	Eptatretus_burgeri
ENSPVAG00000009478	RTCA	100	91.029	ENSEASG00005015926	RTCA	100	91.029	Equus_asinus_asinus
ENSPVAG00000009478	RTCA	100	91.029	ENSECAG00000019831	RTCA	100	91.029	Equus_caballus
ENSPVAG00000009478	RTCA	91	83.815	ENSEEUG00000001165	RTCA	100	83.815	Erinaceus_europaeus
ENSPVAG00000009478	RTCA	99	68.984	ENSELUG00000003741	rtca	99	68.984	Esox_lucius
ENSPVAG00000009478	RTCA	100	92.689	ENSFCAG00000024460	RTCA	100	92.689	Felis_catus
ENSPVAG00000009478	RTCA	93	77.904	ENSFALG00000002443	RTCA	91	77.904	Ficedula_albicollis
ENSPVAG00000009478	RTCA	98	68.717	ENSFDAG00000016084	-	100	68.717	Fukomys_damarensis
ENSPVAG00000009478	RTCA	100	90.237	ENSFDAG00000012070	-	100	90.237	Fukomys_damarensis
ENSPVAG00000009478	RTCA	53	72.906	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSPVAG00000009478	RTCA	100	65.435	ENSGMOG00000013264	rtca	100	65.435	Gadus_morhua
ENSPVAG00000009478	RTCA	100	79.156	ENSGALG00000005277	RTCA	100	79.156	Gallus_gallus
ENSPVAG00000009478	RTCA	100	67.282	ENSGAFG00000011853	rtca	99	67.282	Gambusia_affinis
ENSPVAG00000009478	RTCA	100	66.227	ENSGACG00000013497	rtca	100	66.227	Gasterosteus_aculeatus
ENSPVAG00000009478	RTCA	81	80.065	ENSGAGG00000023306	RTCA	100	80.065	Gopherus_agassizii
ENSPVAG00000009478	RTCA	100	89.182	ENSGGOG00000044018	-	100	89.182	Gorilla_gorilla
ENSPVAG00000009478	RTCA	100	93.140	ENSGGOG00000009546	-	100	93.204	Gorilla_gorilla
ENSPVAG00000009478	RTCA	100	66.053	ENSHBUG00000002114	rtca	99	66.053	Haplochromis_burtoni
ENSPVAG00000009478	RTCA	100	88.918	ENSHGLG00000002617	RTCA	100	88.918	Heterocephalus_glaber_female
ENSPVAG00000009478	RTCA	100	88.918	ENSHGLG00100006056	RTCA	100	88.918	Heterocephalus_glaber_male
ENSPVAG00000009478	RTCA	100	59.894	ENSHCOG00000020628	rtca	88	60.428	Hippocampus_comes
ENSPVAG00000009478	RTCA	100	68.865	ENSIPUG00000024803	rtca	100	68.865	Ictalurus_punctatus
ENSPVAG00000009478	RTCA	100	80.739	ENSSTOG00000033099	-	100	80.739	Ictidomys_tridecemlineatus
ENSPVAG00000009478	RTCA	100	83.641	ENSSTOG00000013528	-	100	83.641	Ictidomys_tridecemlineatus
ENSPVAG00000009478	RTCA	100	64.644	ENSJJAG00000016178	Rtca	100	64.644	Jaculus_jaculus
ENSPVAG00000009478	RTCA	99	68.182	ENSKMAG00000006651	rtca	98	68.182	Kryptolebias_marmoratus
ENSPVAG00000009478	RTCA	99	66.310	ENSLBEG00000028971	rtca	99	66.310	Labrus_bergylta
ENSPVAG00000009478	RTCA	84	68.770	ENSLBEG00000002448	-	98	68.770	Labrus_bergylta
ENSPVAG00000009478	RTCA	100	73.879	ENSLACG00000013666	RTCA	100	73.879	Latimeria_chalumnae
ENSPVAG00000009478	RTCA	100	69.393	ENSLOCG00000000093	rtca	99	69.393	Lepisosteus_oculatus
ENSPVAG00000009478	RTCA	100	89.446	ENSLAFG00000001473	RTCA	100	89.446	Loxodonta_africana
ENSPVAG00000009478	RTCA	100	93.404	ENSMFAG00000034132	RTCA	100	93.404	Macaca_fascicularis
ENSPVAG00000009478	RTCA	100	92.876	ENSMMUG00000019105	RTCA	100	92.876	Macaca_mulatta
ENSPVAG00000009478	RTCA	81	93.528	ENSMNEG00000037163	RTCA	100	93.528	Macaca_nemestrina
ENSPVAG00000009478	RTCA	100	76.781	ENSMLEG00000042151	RTCA	100	76.781	Mandrillus_leucophaeus
ENSPVAG00000009478	RTCA	100	68.338	ENSMAMG00000016536	rtca	100	68.338	Mastacembelus_armatus
ENSPVAG00000009478	RTCA	100	66.316	ENSMZEG00005017945	rtca	99	66.316	Maylandia_zebra
ENSPVAG00000009478	RTCA	84	80.442	ENSMGAG00000006892	RTCA	99	80.442	Meleagris_gallopavo
ENSPVAG00000009478	RTCA	100	87.863	ENSMAUG00000008488	Rtca	100	87.863	Mesocricetus_auratus
ENSPVAG00000009478	RTCA	81	94.498	ENSMICG00000008643	RTCA	100	94.498	Microcebus_murinus
ENSPVAG00000009478	RTCA	100	88.654	ENSMOCG00000016660	Rtca	100	88.654	Microtus_ochrogaster
ENSPVAG00000009478	RTCA	81	70.227	ENSMMOG00000007750	rtca	100	70.227	Mola_mola
ENSPVAG00000009478	RTCA	100	87.335	ENSMODG00000003557	RTCA	100	87.335	Monodelphis_domestica
ENSPVAG00000009478	RTCA	100	68.602	ENSMALG00000020844	rtca	100	68.602	Monopterus_albus
ENSPVAG00000009478	RTCA	100	87.335	MGP_CAROLIEiJ_G0025565	Rtca	94	97.959	Mus_caroli
ENSPVAG00000009478	RTCA	100	86.807	ENSMUSG00000000339	Rtca	94	97.959	Mus_musculus
ENSPVAG00000009478	RTCA	100	87.071	MGP_PahariEiJ_G0027011	Rtca	94	97.959	Mus_pahari
ENSPVAG00000009478	RTCA	100	87.071	MGP_SPRETEiJ_G0026515	Rtca	94	97.959	Mus_spretus
ENSPVAG00000009478	RTCA	100	92.084	ENSMPUG00000012119	RTCA	100	92.084	Mustela_putorius_furo
ENSPVAG00000009478	RTCA	100	84.737	ENSMLUG00000009922	RTCA	100	84.737	Myotis_lucifugus
ENSPVAG00000009478	RTCA	100	87.863	ENSNGAG00000011540	Rtca	99	87.863	Nannospalax_galili
ENSPVAG00000009478	RTCA	100	66.316	ENSNBRG00000003062	rtca	99	66.316	Neolamprologus_brichardi
ENSPVAG00000009478	RTCA	100	92.876	ENSNLEG00000031426	RTCA	100	92.876	Nomascus_leucogenys
ENSPVAG00000009478	RTCA	60	92.683	ENSMEUG00000010030	-	61	93.182	Notamacropus_eugenii
ENSPVAG00000009478	RTCA	71	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSPVAG00000009478	RTCA	95	89.751	ENSODEG00000006990	RTCA	96	89.835	Octodon_degus
ENSPVAG00000009478	RTCA	100	66.053	ENSONIG00000007753	rtca	99	66.053	Oreochromis_niloticus
ENSPVAG00000009478	RTCA	86	84.404	ENSOANG00000012055	RTCA	99	84.404	Ornithorhynchus_anatinus
ENSPVAG00000009478	RTCA	100	91.821	ENSOCUG00000014247	RTCA	100	91.821	Oryctolagus_cuniculus
ENSPVAG00000009478	RTCA	100	66.755	ENSORLG00000013605	rtca	100	66.755	Oryzias_latipes
ENSPVAG00000009478	RTCA	100	66.755	ENSORLG00020001904	rtca	100	66.755	Oryzias_latipes_hni
ENSPVAG00000009478	RTCA	100	66.755	ENSORLG00015021064	rtca	100	66.755	Oryzias_latipes_hsok
ENSPVAG00000009478	RTCA	100	67.282	ENSOMEG00000000756	rtca	100	67.282	Oryzias_melastigma
ENSPVAG00000009478	RTCA	100	81.530	ENSOGAG00000005627	RTCA	100	81.530	Otolemur_garnettii
ENSPVAG00000009478	RTCA	84	93.375	ENSOARG00000018122	RTCA	99	93.375	Ovis_aries
ENSPVAG00000009478	RTCA	100	92.876	ENSPPAG00000035119	RTCA	100	93.204	Pan_paniscus
ENSPVAG00000009478	RTCA	100	92.428	ENSPPRG00000000350	RTCA	100	92.428	Panthera_pardus
ENSPVAG00000009478	RTCA	100	92.428	ENSPTIG00000012816	RTCA	100	92.428	Panthera_tigris_altaica
ENSPVAG00000009478	RTCA	100	92.876	ENSPTRG00000001004	RTCA	100	93.204	Pan_troglodytes
ENSPVAG00000009478	RTCA	100	90.501	ENSPANG00000000346	RTCA	100	90.501	Papio_anubis
ENSPVAG00000009478	RTCA	100	69.921	ENSPKIG00000001653	rtca	100	69.921	Paramormyrops_kingsleyae
ENSPVAG00000009478	RTCA	100	80.475	ENSPSIG00000011408	RTCA	100	80.475	Pelodiscus_sinensis
ENSPVAG00000009478	RTCA	100	87.863	ENSPEMG00000018582	Rtca	100	87.863	Peromyscus_maniculatus_bairdii
ENSPVAG00000009478	RTCA	99	54.933	ENSPMAG00000009110	rtca	99	54.497	Petromyzon_marinus
ENSPVAG00000009478	RTCA	100	87.599	ENSPCIG00000007684	RTCA	100	87.599	Phascolarctos_cinereus
ENSPVAG00000009478	RTCA	100	68.074	ENSPFOG00000004824	rtca	100	68.074	Poecilia_formosa
ENSPVAG00000009478	RTCA	100	67.810	ENSPLAG00000011753	rtca	99	67.810	Poecilia_latipinna
ENSPVAG00000009478	RTCA	100	67.810	ENSPMEG00000020469	rtca	99	67.810	Poecilia_mexicana
ENSPVAG00000009478	RTCA	100	68.602	ENSPREG00000001365	rtca	99	68.602	Poecilia_reticulata
ENSPVAG00000009478	RTCA	100	89.974	ENSPPYG00000001115	RTCA	100	89.974	Pongo_abelii
ENSPVAG00000009478	RTCA	100	86.544	ENSPCAG00000005076	RTCA	100	86.544	Procavia_capensis
ENSPVAG00000009478	RTCA	100	91.821	ENSPCOG00000005603	RTCA	94	100.000	Propithecus_coquereli
ENSPVAG00000009478	RTCA	100	66.316	ENSPNYG00000004722	rtca	99	66.316	Pundamilia_nyererei
ENSPVAG00000009478	RTCA	100	68.602	ENSPNAG00000022270	rtca	100	68.602	Pygocentrus_nattereri
ENSPVAG00000009478	RTCA	100	87.335	ENSRNOG00000014575	Rtca	100	87.335	Rattus_norvegicus
ENSPVAG00000009478	RTCA	100	92.612	ENSRBIG00000041180	RTCA	100	92.612	Rhinopithecus_bieti
ENSPVAG00000009478	RTCA	100	92.612	ENSRROG00000024929	RTCA	100	92.612	Rhinopithecus_roxellana
ENSPVAG00000009478	RTCA	100	91.029	ENSSBOG00000028626	RTCA	100	91.029	Saimiri_boliviensis_boliviensis
ENSPVAG00000009478	RTCA	100	87.599	ENSSHAG00000001758	RTCA	100	87.599	Sarcophilus_harrisii
ENSPVAG00000009478	RTCA	98	65.952	ENSSMAG00000014680	rtca	97	65.952	Scophthalmus_maximus
ENSPVAG00000009478	RTCA	98	67.292	ENSSDUG00000015585	rtca	97	67.292	Seriola_dumerili
ENSPVAG00000009478	RTCA	96	67.582	ENSSLDG00000018985	rtca	95	67.582	Seriola_lalandi_dorsalis
ENSPVAG00000009478	RTCA	84	85.489	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSPVAG00000009478	RTCA	100	66.755	ENSSPAG00000011938	rtca	99	66.755	Stegastes_partitus
ENSPVAG00000009478	RTCA	100	91.029	ENSSSCG00000006865	RTCA	100	91.029	Sus_scrofa
ENSPVAG00000009478	RTCA	100	79.156	ENSTGUG00000005154	RTCA	100	79.156	Taeniopygia_guttata
ENSPVAG00000009478	RTCA	100	66.755	ENSTRUG00000008799	rtca	100	66.755	Takifugu_rubripes
ENSPVAG00000009478	RTCA	100	67.810	ENSTNIG00000004725	rtca	100	67.810	Tetraodon_nigroviridis
ENSPVAG00000009478	RTCA	60	90.000	ENSTBEG00000000943	RTCA	82	64.706	Tupaia_belangeri
ENSPVAG00000009478	RTCA	100	93.140	ENSTTRG00000015327	RTCA	100	93.140	Tursiops_truncatus
ENSPVAG00000009478	RTCA	93	89.831	ENSUAMG00000017265	RTCA	96	89.831	Ursus_americanus
ENSPVAG00000009478	RTCA	100	91.029	ENSUMAG00000007881	RTCA	100	91.029	Ursus_maritimus
ENSPVAG00000009478	RTCA	87	84.545	ENSVPAG00000001039	RTCA	87	84.545	Vicugna_pacos
ENSPVAG00000009478	RTCA	100	91.557	ENSVVUG00000022041	RTCA	68	91.557	Vulpes_vulpes
ENSPVAG00000009478	RTCA	99	61.905	ENSXETG00000031661	RTCA	99	61.905	Xenopus_tropicalis
ENSPVAG00000009478	RTCA	100	58.730	ENSXCOG00000008002	rtca	100	58.730	Xiphophorus_couchianus
ENSPVAG00000009478	RTCA	100	67.546	ENSXMAG00000005482	rtca	99	67.546	Xiphophorus_maculatus