EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000009713 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 74971 bases
Position: chrGeneScaffold_2576:64647-139617
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000009159	ResIII	PF04851.15	1.2e-11	1	1
ENSPVAP00000009159	DEAD	PF00270.29	3.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009714	HFM1-201	4218	-	ENSPVAP00000009159	1405 (aa)	-	UPI00018B3909

Gene Model

Click here to download ENSPVAG00000009713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009713	HFM1	100	78.079	ENSG00000162669	HFM1	100	80.435	Homo_sapiens
ENSPVAG00000009713	HFM1	61	60.070	ENSAPOG00000005304	hfm1	96	60.070	Acanthochromis_polyacanthus
ENSPVAG00000009713	HFM1	100	78.611	ENSAMEG00000000432	HFM1	100	78.611	Ailuropoda_melanoleuca
ENSPVAG00000009713	HFM1	66	58.040	ENSACIG00000021553	hfm1	83	58.040	Amphilophus_citrinellus
ENSPVAG00000009713	HFM1	61	60.327	ENSAOCG00000022839	hfm1	96	62.169	Amphiprion_ocellaris
ENSPVAG00000009713	HFM1	61	60.327	ENSAPEG00000014316	hfm1	96	62.200	Amphiprion_percula
ENSPVAG00000009713	HFM1	67	58.848	ENSATEG00000019181	hfm1	79	57.650	Anabas_testudineus
ENSPVAG00000009713	HFM1	100	55.571	ENSAPLG00000013639	HFM1	100	55.571	Anas_platyrhynchos
ENSPVAG00000009713	HFM1	100	74.705	ENSANAG00000029513	HFM1	100	74.705	Aotus_nancymaae
ENSPVAG00000009713	HFM1	66	57.479	ENSACLG00000009033	hfm1	98	59.953	Astatotilapia_calliptera
ENSPVAG00000009713	HFM1	70	58.794	ENSAMXG00000006108	hfm1	68	58.794	Astyanax_mexicanus
ENSPVAG00000009713	HFM1	100	77.917	ENSBTAG00000020856	HFM1	100	77.917	Bos_taurus
ENSPVAG00000009713	HFM1	100	76.200	ENSCJAG00000001843	HFM1	100	76.200	Callithrix_jacchus
ENSPVAG00000009713	HFM1	100	77.623	ENSCAFG00000020187	HFM1	100	77.623	Canis_familiaris
ENSPVAG00000009713	HFM1	100	75.469	ENSTSYG00000014250	HFM1	100	75.469	Carlito_syrichta
ENSPVAG00000009713	HFM1	99	71.338	ENSCPOG00000007421	HFM1	99	71.268	Cavia_porcellus
ENSPVAG00000009713	HFM1	100	76.200	ENSCCAG00000033206	HFM1	100	76.200	Cebus_capucinus
ENSPVAG00000009713	HFM1	100	77.592	ENSCATG00000030987	HFM1	100	77.592	Cercocebus_atys
ENSPVAG00000009713	HFM1	100	71.072	ENSCLAG00000005173	HFM1	99	71.072	Chinchilla_lanigera
ENSPVAG00000009713	HFM1	61	93.421	ENSCHOG00000011824	-	70	93.421	Choloepus_hoffmanni
ENSPVAG00000009713	HFM1	100	66.158	ENSCGRG00001016995	Hfm1	100	66.158	Cricetulus_griseus_chok1gshd
ENSPVAG00000009713	HFM1	100	68.841	ENSCGRG00000017181	Hfm1	100	68.841	Cricetulus_griseus_crigri
ENSPVAG00000009713	HFM1	68	57.070	ENSCSEG00000017659	hfm1	90	57.070	Cynoglossus_semilaevis
ENSPVAG00000009713	HFM1	51	60.589	ENSCVAG00000005075	hfm1	86	60.589	Cyprinodon_variegatus
ENSPVAG00000009713	HFM1	61	61.072	ENSDARG00000104288	hfm1	77	61.072	Danio_rerio
ENSPVAG00000009713	HFM1	100	72.574	ENSDNOG00000004776	HFM1	100	72.574	Dasypus_novemcinctus
ENSPVAG00000009713	HFM1	100	69.479	ENSDORG00000014661	Hfm1	100	69.479	Dipodomys_ordii
ENSPVAG00000009713	HFM1	70	78.846	ENSEASG00005015424	HFM1	98	79.783	Equus_asinus_asinus
ENSPVAG00000009713	HFM1	100	77.306	ENSECAG00000024039	HFM1	100	77.306	Equus_caballus
ENSPVAG00000009713	HFM1	64	60.879	ENSELUG00000018944	hfm1	97	60.879	Esox_lucius
ENSPVAG00000009713	HFM1	100	78.611	ENSFCAG00000029116	HFM1	100	78.611	Felis_catus
ENSPVAG00000009713	HFM1	85	61.314	ENSFALG00000001781	HFM1	92	61.476	Ficedula_albicollis
ENSPVAG00000009713	HFM1	100	68.792	ENSFDAG00000020816	HFM1	94	74.882	Fukomys_damarensis
ENSPVAG00000009713	HFM1	68	55.312	ENSGMOG00000017436	hfm1	99	55.312	Gadus_morhua
ENSPVAG00000009713	HFM1	67	58.421	ENSGAFG00000018093	hfm1	93	61.151	Gambusia_affinis
ENSPVAG00000009713	HFM1	68	56.979	ENSGACG00000015686	hfm1	99	56.979	Gasterosteus_aculeatus
ENSPVAG00000009713	HFM1	100	77.801	ENSGGOG00000038524	HFM1	100	77.801	Gorilla_gorilla
ENSPVAG00000009713	HFM1	66	58.565	ENSHBUG00000007309	hfm1	86	58.565	Haplochromis_burtoni
ENSPVAG00000009713	HFM1	58	59.705	ENSHCOG00000019632	hfm1	97	59.705	Hippocampus_comes
ENSPVAG00000009713	HFM1	66	59.722	ENSIPUG00000017020	hfm1	96	59.521	Ictalurus_punctatus
ENSPVAG00000009713	HFM1	100	72.747	ENSJJAG00000017198	Hfm1	100	72.747	Jaculus_jaculus
ENSPVAG00000009713	HFM1	63	57.412	ENSKMAG00000002282	hfm1	90	57.475	Kryptolebias_marmoratus
ENSPVAG00000009713	HFM1	66	56.745	ENSLBEG00000006759	hfm1	97	60.495	Labrus_bergylta
ENSPVAG00000009713	HFM1	67	65.181	ENSLACG00000010698	HFM1	91	65.285	Latimeria_chalumnae
ENSPVAG00000009713	HFM1	71	60.417	ENSLOCG00000004931	hfm1	93	60.516	Lepisosteus_oculatus
ENSPVAG00000009713	HFM1	53	84.054	ENSLAFG00000015903	-	99	84.054	Loxodonta_africana
ENSPVAG00000009713	HFM1	100	76.528	ENSMFAG00000003649	HFM1	100	76.528	Macaca_fascicularis
ENSPVAG00000009713	HFM1	100	77.383	ENSMMUG00000006819	HFM1	100	77.383	Macaca_mulatta
ENSPVAG00000009713	HFM1	59	60.870	ENSMAMG00000004623	hfm1	97	60.870	Mastacembelus_armatus
ENSPVAG00000009713	HFM1	66	57.479	ENSMZEG00005004679	hfm1	98	59.953	Maylandia_zebra
ENSPVAG00000009713	HFM1	56	71.046	ENSMGAG00000008437	HFM1	98	71.046	Meleagris_gallopavo
ENSPVAG00000009713	HFM1	100	68.724	ENSMAUG00000018858	Hfm1	100	68.724	Mesocricetus_auratus
ENSPVAG00000009713	HFM1	100	76.475	ENSMICG00000037935	HFM1	100	76.475	Microcebus_murinus
ENSPVAG00000009713	HFM1	100	66.875	ENSMOCG00000014812	Hfm1	100	66.875	Microtus_ochrogaster
ENSPVAG00000009713	HFM1	63	58.520	ENSMMOG00000006148	hfm1	96	59.907	Mola_mola
ENSPVAG00000009713	HFM1	66	57.816	ENSMALG00000002401	hfm1	96	60.443	Monopterus_albus
ENSPVAG00000009713	HFM1	94	64.524	MGP_CAROLIEiJ_G0027496	Hfm1	100	64.524	Mus_caroli
ENSPVAG00000009713	HFM1	100	68.403	ENSMUSG00000043410	Hfm1	100	68.403	Mus_musculus
ENSPVAG00000009713	HFM1	100	68.333	MGP_PahariEiJ_G0017268	Hfm1	100	68.333	Mus_pahari
ENSPVAG00000009713	HFM1	100	68.264	MGP_SPRETEiJ_G0028495	Hfm1	100	68.264	Mus_spretus
ENSPVAG00000009713	HFM1	100	74.949	ENSMPUG00000004594	HFM1	100	74.949	Mustela_putorius_furo
ENSPVAG00000009713	HFM1	100	77.285	ENSMLUG00000010200	HFM1	100	77.285	Myotis_lucifugus
ENSPVAG00000009713	HFM1	69	55.102	ENSNBRG00000002910	hfm1	97	60.437	Neolamprologus_brichardi
ENSPVAG00000009713	HFM1	100	74.149	ENSNLEG00000010285	HFM1	100	74.149	Nomascus_leucogenys
ENSPVAG00000009713	HFM1	71	86.420	ENSMEUG00000015788	HFM1	69	86.420	Notamacropus_eugenii
ENSPVAG00000009713	HFM1	81	80.064	ENSOPRG00000013916	HFM1	81	80.064	Ochotona_princeps
ENSPVAG00000009713	HFM1	73	55.792	ENSONIG00000010590	hfm1	99	55.792	Oreochromis_niloticus
ENSPVAG00000009713	HFM1	58	60.148	ENSORLG00000026844	hfm1	99	60.148	Oryzias_latipes
ENSPVAG00000009713	HFM1	65	63.115	ENSORLG00020002951	hfm1	78	63.115	Oryzias_latipes_hni
ENSPVAG00000009713	HFM1	69	56.181	ENSOMEG00000016474	hfm1	68	56.181	Oryzias_melastigma
ENSPVAG00000009713	HFM1	87	78.310	ENSOGAG00000032369	HFM1	100	78.310	Otolemur_garnettii
ENSPVAG00000009713	HFM1	100	77.793	ENSOARG00000015812	HFM1	100	77.793	Ovis_aries
ENSPVAG00000009713	HFM1	92	78.566	ENSPPAG00000024582	HFM1	100	78.566	Pan_paniscus
ENSPVAG00000009713	HFM1	100	78.958	ENSPPRG00000003270	HFM1	100	78.958	Panthera_pardus
ENSPVAG00000009713	HFM1	100	78.819	ENSPTIG00000018881	HFM1	100	78.819	Panthera_tigris_altaica
ENSPVAG00000009713	HFM1	100	78.079	ENSPTRG00000000948	HFM1	100	78.079	Pan_troglodytes
ENSPVAG00000009713	HFM1	100	77.383	ENSPANG00000009838	HFM1	100	77.383	Papio_anubis
ENSPVAG00000009713	HFM1	63	61.728	ENSPKIG00000003810	hfm1	95	62.833	Paramormyrops_kingsleyae
ENSPVAG00000009713	HFM1	59	60.701	ENSPMGG00000011059	hfm1	100	60.701	Periophthalmus_magnuspinnatus
ENSPVAG00000009713	HFM1	100	70.208	ENSPEMG00000022852	Hfm1	100	70.208	Peromyscus_maniculatus_bairdii
ENSPVAG00000009713	HFM1	100	64.550	ENSPCIG00000014233	HFM1	94	66.773	Phascolarctos_cinereus
ENSPVAG00000009713	HFM1	68	59.875	ENSPFOG00000017194	hfm1	92	59.875	Poecilia_formosa
ENSPVAG00000009713	HFM1	66	60.768	ENSPLAG00000000571	hfm1	85	60.768	Poecilia_latipinna
ENSPVAG00000009713	HFM1	66	60.684	ENSPMEG00000019475	hfm1	86	60.684	Poecilia_mexicana
ENSPVAG00000009713	HFM1	66	59.936	ENSPREG00000007803	hfm1	94	60.454	Poecilia_reticulata
ENSPVAG00000009713	HFM1	100	77.731	ENSPPYG00000001163	HFM1	100	77.731	Pongo_abelii
ENSPVAG00000009713	HFM1	66	88.235	ENSPCAG00000004289	-	61	88.235	Procavia_capensis
ENSPVAG00000009713	HFM1	66	57.372	ENSPNYG00000001795	hfm1	98	59.953	Pundamilia_nyererei
ENSPVAG00000009713	HFM1	60	61.737	ENSPNAG00000010865	hfm1	84	61.737	Pygocentrus_nattereri
ENSPVAG00000009713	HFM1	100	68.450	ENSRNOG00000023299	Hfm1	100	68.450	Rattus_norvegicus
ENSPVAG00000009713	HFM1	100	77.383	ENSRROG00000045569	HFM1	100	77.383	Rhinopithecus_roxellana
ENSPVAG00000009713	HFM1	100	77.260	ENSSBOG00000027456	HFM1	100	77.260	Saimiri_boliviensis_boliviensis
ENSPVAG00000009713	HFM1	61	66.127	ENSSHAG00000014616	-	98	66.127	Sarcophilus_harrisii
ENSPVAG00000009713	HFM1	69	59.218	ENSSFOG00015020129	hfm1	66	59.218	Scleropages_formosus
ENSPVAG00000009713	HFM1	63	58.491	ENSSMAG00000006907	hfm1	87	58.491	Scophthalmus_maximus
ENSPVAG00000009713	HFM1	61	59.393	ENSSDUG00000011424	hfm1	96	59.393	Seriola_dumerili
ENSPVAG00000009713	HFM1	61	59.698	ENSSLDG00000016386	hfm1	96	59.698	Seriola_lalandi_dorsalis
ENSPVAG00000009713	HFM1	63	72.667	ENSSPAG00000001023	hfm1	85	72.667	Stegastes_partitus
ENSPVAG00000009713	HFM1	100	74.376	ENSSSCG00000006912	HFM1	100	74.376	Sus_scrofa
ENSPVAG00000009713	HFM1	68	70.378	ENSTGUG00000006172	HFM1	99	70.378	Taeniopygia_guttata
ENSPVAG00000009713	HFM1	100	74.583	ENSTTRG00000013933	HFM1	100	74.583	Tursiops_truncatus
ENSPVAG00000009713	HFM1	90	81.967	ENSVPAG00000011331	HFM1	90	81.967	Vicugna_pacos
ENSPVAG00000009713	HFM1	70	76.318	ENSVVUG00000020760	HFM1	96	78.214	Vulpes_vulpes
ENSPVAG00000009713	HFM1	59	61.669	ENSXMAG00000004178	hfm1	92	61.669	Xiphophorus_maculatus