EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000009829 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 7324 bases
Position: chrscaffold_1629:163065-170388
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000009264	R3H	PF01424.22	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009829	R3HCC1-201	1368	-	ENSPVAP00000009264	456 (aa)	-	UPI00018B2F85

Gene Model

Click here to download ENSPVAG00000009829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009829	R3HCC1	96	79.148	ENSG00000104679	R3HCC1	100	90.698	Homo_sapiens
ENSPVAG00000009829	R3HCC1	73	39.161	ENSAPOG00000003616	r3hcc1	92	32.791	Acanthochromis_polyacanthus
ENSPVAG00000009829	R3HCC1	96	78.781	ENSAMEG00000002963	R3HCC1	95	77.729	Ailuropoda_melanoleuca
ENSPVAG00000009829	R3HCC1	94	31.250	ENSACIG00000017144	r3hcc1	99	31.102	Amphilophus_citrinellus
ENSPVAG00000009829	R3HCC1	91	33.411	ENSAOCG00000003945	r3hcc1	98	34.571	Amphiprion_ocellaris
ENSPVAG00000009829	R3HCC1	91	33.411	ENSAPEG00000003613	r3hcc1	98	33.643	Amphiprion_percula
ENSPVAG00000009829	R3HCC1	97	47.137	ENSACAG00000016627	R3HCC1	100	47.158	Anolis_carolinensis
ENSPVAG00000009829	R3HCC1	97	80.000	ENSANAG00000036169	R3HCC1	97	80.000	Aotus_nancymaae
ENSPVAG00000009829	R3HCC1	97	77.079	ENSBTAG00000025830	R3HCC1	97	77.079	Bos_taurus
ENSPVAG00000009829	R3HCC1	96	78.251	ENSCJAG00000020118	R3HCC1	100	70.068	Callithrix_jacchus
ENSPVAG00000009829	R3HCC1	97	75.225	ENSCAFG00000009210	R3HCC1	96	76.351	Canis_familiaris
ENSPVAG00000009829	R3HCC1	84	71.979	ENSCAFG00020012870	R3HCC1	90	72.751	Canis_lupus_dingo
ENSPVAG00000009829	R3HCC1	95	72.506	ENSCHIG00000009107	R3HCC1	99	72.506	Capra_hircus
ENSPVAG00000009829	R3HCC1	97	79.065	ENSTSYG00000000511	R3HCC1	79	79.065	Carlito_syrichta
ENSPVAG00000009829	R3HCC1	86	57.506	ENSCAPG00000015813	R3HCC1	99	57.275	Cavia_aperea
ENSPVAG00000009829	R3HCC1	94	65.042	ENSCPOG00000009696	R3HCC1	99	64.831	Cavia_porcellus
ENSPVAG00000009829	R3HCC1	96	78.027	ENSCCAG00000037811	R3HCC1	96	77.609	Cebus_capucinus
ENSPVAG00000009829	R3HCC1	99	76.739	ENSCATG00000032971	R3HCC1	100	71.429	Cercocebus_atys
ENSPVAG00000009829	R3HCC1	96	72.748	ENSCLAG00000015556	R3HCC1	86	72.088	Chinchilla_lanigera
ENSPVAG00000009829	R3HCC1	99	76.739	ENSCSAG00000016250	R3HCC1	96	77.826	Chlorocebus_sabaeus
ENSPVAG00000009829	R3HCC1	98	74.009	ENSCHOG00000000396	R3HCC1	98	74.009	Choloepus_hoffmanni
ENSPVAG00000009829	R3HCC1	99	76.623	ENSCANG00000029441	R3HCC1	96	76.623	Colobus_angolensis_palliatus
ENSPVAG00000009829	R3HCC1	95	62.893	ENSCGRG00001014977	R3hcc1	99	63.522	Cricetulus_griseus_chok1gshd
ENSPVAG00000009829	R3HCC1	95	62.893	ENSCGRG00000004454	R3hcc1	99	63.522	Cricetulus_griseus_crigri
ENSPVAG00000009829	R3HCC1	93	32.018	ENSCSEG00000005748	r3hcc1	99	32.018	Cynoglossus_semilaevis
ENSPVAG00000009829	R3HCC1	79	32.713	ENSCVAG00000002640	r3hcc1	95	32.181	Cyprinodon_variegatus
ENSPVAG00000009829	R3HCC1	95	34.096	ENSDARG00000099593	r3hcc1	98	34.813	Danio_rerio
ENSPVAG00000009829	R3HCC1	98	76.991	ENSDNOG00000007168	R3HCC1	94	76.991	Dasypus_novemcinctus
ENSPVAG00000009829	R3HCC1	95	65.409	ENSDORG00000026365	R3hcc1	99	64.271	Dipodomys_ordii
ENSPVAG00000009829	R3HCC1	96	66.516	ENSETEG00000001147	R3HCC1	97	66.742	Echinops_telfairi
ENSPVAG00000009829	R3HCC1	96	82.805	ENSEASG00005018782	R3HCC1	80	82.805	Equus_asinus_asinus
ENSPVAG00000009829	R3HCC1	96	83.258	ENSECAG00000025013	R3HCC1	98	83.258	Equus_caballus
ENSPVAG00000009829	R3HCC1	96	75.339	ENSEEUG00000011918	R3HCC1	97	75.339	Erinaceus_europaeus
ENSPVAG00000009829	R3HCC1	88	35.172	ENSELUG00000023650	r3hcc1	98	35.680	Esox_lucius
ENSPVAG00000009829	R3HCC1	99	78.414	ENSFCAG00000012395	R3HCC1	96	79.819	Felis_catus
ENSPVAG00000009829	R3HCC1	94	66.885	ENSFDAG00000001572	R3HCC1	98	66.885	Fukomys_damarensis
ENSPVAG00000009829	R3HCC1	67	38.621	ENSGMOG00000017590	-	82	38.621	Gadus_morhua
ENSPVAG00000009829	R3HCC1	95	34.505	ENSGAFG00000008747	-	95	34.442	Gambusia_affinis
ENSPVAG00000009829	R3HCC1	94	35.780	ENSGACG00000008447	r3hcc1	97	35.780	Gasterosteus_aculeatus
ENSPVAG00000009829	R3HCC1	99	77.174	ENSGGOG00000013817	R3HCC1	100	78.005	Gorilla_gorilla
ENSPVAG00000009829	R3HCC1	51	50.000	ENSHBUG00000022250	-	68	50.000	Haplochromis_burtoni
ENSPVAG00000009829	R3HCC1	96	71.071	ENSHGLG00000010517	R3HCC1	94	70.175	Heterocephalus_glaber_female
ENSPVAG00000009829	R3HCC1	96	71.071	ENSHGLG00100006388	R3HCC1	94	70.175	Heterocephalus_glaber_male
ENSPVAG00000009829	R3HCC1	93	33.412	ENSHCOG00000011745	r3hcc1	94	33.103	Hippocampus_comes
ENSPVAG00000009829	R3HCC1	94	35.227	ENSIPUG00000024504	r3hcc1	87	36.281	Ictalurus_punctatus
ENSPVAG00000009829	R3HCC1	96	66.964	ENSSTOG00000027130	R3HCC1	99	65.948	Ictidomys_tridecemlineatus
ENSPVAG00000009829	R3HCC1	96	68.240	ENSJJAG00000013075	R3hcc1	100	69.099	Jaculus_jaculus
ENSPVAG00000009829	R3HCC1	89	32.688	ENSKMAG00000000286	r3hcc1	99	32.688	Kryptolebias_marmoratus
ENSPVAG00000009829	R3HCC1	93	41.138	ENSLACG00000011894	R3HCC1	97	40.257	Latimeria_chalumnae
ENSPVAG00000009829	R3HCC1	93	34.081	ENSLOCG00000015442	r3hcc1	99	34.917	Lepisosteus_oculatus
ENSPVAG00000009829	R3HCC1	98	69.450	ENSLAFG00000016137	R3HCC1	97	69.654	Loxodonta_africana
ENSPVAG00000009829	R3HCC1	99	76.522	ENSMFAG00000032894	R3HCC1	100	71.202	Macaca_fascicularis
ENSPVAG00000009829	R3HCC1	99	76.522	ENSMMUG00000016655	R3HCC1	94	77.609	Macaca_mulatta
ENSPVAG00000009829	R3HCC1	99	77.174	ENSMNEG00000043283	R3HCC1	100	70.975	Macaca_nemestrina
ENSPVAG00000009829	R3HCC1	99	76.739	ENSMLEG00000030147	R3HCC1	100	91.304	Mandrillus_leucophaeus
ENSPVAG00000009829	R3HCC1	89	33.099	ENSMAMG00000018146	r3hcc1	99	32.870	Mastacembelus_armatus
ENSPVAG00000009829	R3HCC1	95	47.273	ENSMGAG00000001356	R3HCC1	91	47.273	Meleagris_gallopavo
ENSPVAG00000009829	R3HCC1	96	78.959	ENSMICG00000011146	R3HCC1	95	78.829	Microcebus_murinus
ENSPVAG00000009829	R3HCC1	94	50.673	ENSMODG00000016809	-	100	50.446	Monodelphis_domestica
ENSPVAG00000009829	R3HCC1	88	32.353	ENSMALG00000000731	r3hcc1	98	32.850	Monopterus_albus
ENSPVAG00000009829	R3HCC1	95	63.017	MGP_CAROLIEiJ_G0019467	R3hcc1	99	59.298	Mus_caroli
ENSPVAG00000009829	R3HCC1	95	63.223	ENSMUSG00000034194	R3hcc1	99	58.264	Mus_musculus
ENSPVAG00000009829	R3HCC1	95	61.224	MGP_PahariEiJ_G0030484	R3hcc1	81	79.503	Mus_pahari
ENSPVAG00000009829	R3HCC1	95	62.834	MGP_SPRETEiJ_G0020359	R3hcc1	99	57.906	Mus_spretus
ENSPVAG00000009829	R3HCC1	96	78.104	ENSMPUG00000003457	R3HCC1	90	77.074	Mustela_putorius_furo
ENSPVAG00000009829	R3HCC1	96	81.306	ENSMLUG00000000266	R3HCC1	95	80.610	Myotis_lucifugus
ENSPVAG00000009829	R3HCC1	95	70.065	ENSNGAG00000016747	R3hcc1	100	71.150	Nannospalax_galili
ENSPVAG00000009829	R3HCC1	91	75.991	ENSNLEG00000015944	R3HCC1	92	76.457	Nomascus_leucogenys
ENSPVAG00000009829	R3HCC1	96	58.166	ENSMEUG00000010587	R3HCC1	99	57.942	Notamacropus_eugenii
ENSPVAG00000009829	R3HCC1	99	65.217	ENSOPRG00000013390	R3HCC1	99	65.000	Ochotona_princeps
ENSPVAG00000009829	R3HCC1	94	65.598	ENSODEG00000007529	R3HCC1	99	66.454	Octodon_degus
ENSPVAG00000009829	R3HCC1	95	56.152	ENSOANG00000013877	R3HCC1	97	58.444	Ornithorhynchus_anatinus
ENSPVAG00000009829	R3HCC1	96	69.074	ENSOCUG00000023554	R3HCC1	88	68.132	Oryctolagus_cuniculus
ENSPVAG00000009829	R3HCC1	89	33.985	ENSORLG00000016816	r3hcc1	99	33.981	Oryzias_latipes
ENSPVAG00000009829	R3HCC1	89	33.816	ENSORLG00020012005	r3hcc1	99	33.413	Oryzias_latipes_hni
ENSPVAG00000009829	R3HCC1	89	34.307	ENSORLG00015007018	r3hcc1	99	33.981	Oryzias_latipes_hsok
ENSPVAG00000009829	R3HCC1	89	32.692	ENSOMEG00000000816	r3hcc1	99	32.452	Oryzias_melastigma
ENSPVAG00000009829	R3HCC1	97	73.884	ENSOGAG00000001291	R3HCC1	94	73.333	Otolemur_garnettii
ENSPVAG00000009829	R3HCC1	96	77.727	ENSOARG00000010146	R3HCC1	96	77.727	Ovis_aries
ENSPVAG00000009829	R3HCC1	96	78.924	ENSPPAG00000033165	R3HCC1	100	78.685	Pan_paniscus
ENSPVAG00000009829	R3HCC1	96	79.545	ENSPPRG00000002522	R3HCC1	100	80.000	Panthera_pardus
ENSPVAG00000009829	R3HCC1	88	78.272	ENSPTIG00000011230	R3HCC1	95	78.304	Panthera_tigris_altaica
ENSPVAG00000009829	R3HCC1	96	79.596	ENSPTRG00000020076	R3HCC1	96	78.478	Pan_troglodytes
ENSPVAG00000009829	R3HCC1	99	76.739	ENSPANG00000000453	R3HCC1	96	77.826	Papio_anubis
ENSPVAG00000009829	R3HCC1	86	37.531	ENSPKIG00000014426	-	95	36.802	Paramormyrops_kingsleyae
ENSPVAG00000009829	R3HCC1	95	49.784	ENSPSIG00000017664	R3HCC1	98	49.561	Pelodiscus_sinensis
ENSPVAG00000009829	R3HCC1	95	64.463	ENSPEMG00000007118	R3hcc1	99	63.843	Peromyscus_maniculatus_bairdii
ENSPVAG00000009829	R3HCC1	86	54.791	ENSPCIG00000022718	-	83	55.037	Phascolarctos_cinereus
ENSPVAG00000009829	R3HCC1	93	34.266	ENSPFOG00000022301	r3hcc1	90	34.266	Poecilia_formosa
ENSPVAG00000009829	R3HCC1	93	33.487	ENSPLAG00000010794	r3hcc1	90	33.718	Poecilia_latipinna
ENSPVAG00000009829	R3HCC1	93	34.266	ENSPMEG00000022515	r3hcc1	90	34.266	Poecilia_mexicana
ENSPVAG00000009829	R3HCC1	95	34.004	ENSPREG00000000713	r3hcc1	94	33.260	Poecilia_reticulata
ENSPVAG00000009829	R3HCC1	88	78.133	ENSPPYG00000018436	R3HCC1	100	78.133	Pongo_abelii
ENSPVAG00000009829	R3HCC1	73	85.811	ENSPCAG00000012229	R3HCC1	72	85.811	Procavia_capensis
ENSPVAG00000009829	R3HCC1	95	77.471	ENSPCOG00000027554	R3HCC1	99	77.701	Propithecus_coquereli
ENSPVAG00000009829	R3HCC1	90	36.650	ENSPNAG00000023875	r3hcc1	99	36.165	Pygocentrus_nattereri
ENSPVAG00000009829	R3HCC1	99	62.103	ENSRNOG00000016777	AABR07018321.1	73	79.141	Rattus_norvegicus
ENSPVAG00000009829	R3HCC1	95	78.231	ENSRBIG00000028045	R3HCC1	100	79.138	Rhinopithecus_bieti
ENSPVAG00000009829	R3HCC1	99	76.957	ENSRROG00000031126	R3HCC1	100	71.882	Rhinopithecus_roxellana
ENSPVAG00000009829	R3HCC1	95	78.005	ENSSBOG00000022590	R3HCC1	100	78.005	Saimiri_boliviensis_boliviensis
ENSPVAG00000009829	R3HCC1	62	90.476	ENSSHAG00000016526	-	99	51.078	Sarcophilus_harrisii
ENSPVAG00000009829	R3HCC1	87	37.624	ENSSFOG00015013507	r3hcc1	98	37.093	Scleropages_formosus
ENSPVAG00000009829	R3HCC1	89	33.254	ENSSMAG00000008647	r3hcc1	99	33.254	Scophthalmus_maximus
ENSPVAG00000009829	R3HCC1	94	32.548	ENSSDUG00000022786	r3hcc1	99	33.623	Seriola_dumerili
ENSPVAG00000009829	R3HCC1	94	32.120	ENSSLDG00000019031	r3hcc1	99	34.056	Seriola_lalandi_dorsalis
ENSPVAG00000009829	R3HCC1	67	79.861	ENSSARG00000013514	-	70	79.861	Sorex_araneus
ENSPVAG00000009829	R3HCC1	91	33.482	ENSSPAG00000013497	r3hcc1	98	33.929	Stegastes_partitus
ENSPVAG00000009829	R3HCC1	97	81.306	ENSSSCG00000039915	-	96	80.396	Sus_scrofa
ENSPVAG00000009829	R3HCC1	95	74.083	ENSSSCG00000037347	-	89	74.083	Sus_scrofa
ENSPVAG00000009829	R3HCC1	92	33.178	ENSTRUG00000015880	r3hcc1	98	32.710	Takifugu_rubripes
ENSPVAG00000009829	R3HCC1	97	72.197	ENSTTRG00000012247	R3HCC1	100	71.522	Tursiops_truncatus
ENSPVAG00000009829	R3HCC1	95	77.471	ENSUAMG00000007344	R3HCC1	98	77.471	Ursus_americanus
ENSPVAG00000009829	R3HCC1	97	75.901	ENSVVUG00000005056	R3HCC1	96	76.577	Vulpes_vulpes
ENSPVAG00000009829	R3HCC1	90	33.570	ENSXCOG00000017626	r3hcc1	89	33.806	Xiphophorus_couchianus
ENSPVAG00000009829	R3HCC1	95	33.991	ENSXMAG00000018375	r3hcc1	94	34.286	Xiphophorus_maculatus