EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000009839 (Gene tree)
Gene ID: -
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 9497 bases
Position: chrGeneScaffold_2564:26785-36281
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000009272	B3_4	PF03483.17	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009837	LRRC47-201	1740	-	ENSPVAP00000009272	579 (aa)	-	UPI00018B1813

Gene Model

Click here to download ENSPVAG00000009839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009839	LRRC47	100	84.563	ENSG00000130764	LRRC47	100	85.616	Homo_sapiens
ENSPVAG00000009839	LRRC47	99	53.671	ENSAPOG00000019553	lrrc47	99	53.927	Acanthochromis_polyacanthus
ENSPVAG00000009839	LRRC47	79	79.221	ENSAMEG00000009152	LRRC47	100	79.654	Ailuropoda_melanoleuca
ENSPVAG00000009839	LRRC47	66	64.062	ENSAPLG00000003167	LRRC47	100	62.760	Anas_platyrhynchos
ENSPVAG00000009839	LRRC47	65	65.517	ENSACAG00000008267	LRRC47	99	65.426	Anolis_carolinensis
ENSPVAG00000009839	LRRC47	100	83.533	ENSANAG00000025576	LRRC47	100	84.418	Aotus_nancymaae
ENSPVAG00000009839	LRRC47	99	85.121	ENSBTAG00000004738	LRRC47	99	85.763	Bos_taurus
ENSPVAG00000009839	LRRC47	99	84.549	ENSCAFG00000019492	LRRC47	99	84.391	Canis_familiaris
ENSPVAG00000009839	LRRC47	100	84.391	ENSCAFG00020009667	LRRC47	100	84.589	Canis_lupus_dingo
ENSPVAG00000009839	LRRC47	99	86.356	ENSCHIG00000022607	LRRC47	99	85.763	Capra_hircus
ENSPVAG00000009839	LRRC47	96	84.022	ENSTSYG00000009326	LRRC47	96	84.022	Carlito_syrichta
ENSPVAG00000009839	LRRC47	65	74.670	ENSCAPG00000016517	LRRC47	100	73.810	Cavia_aperea
ENSPVAG00000009839	LRRC47	100	81.849	ENSCPOG00000014931	LRRC47	96	80.789	Cavia_porcellus
ENSPVAG00000009839	LRRC47	100	83.705	ENSCCAG00000024895	LRRC47	100	84.589	Cebus_capucinus
ENSPVAG00000009839	LRRC47	100	86.301	ENSCATG00000029337	LRRC47	100	86.130	Cercocebus_atys
ENSPVAG00000009839	LRRC47	100	81.552	ENSCLAG00000006093	LRRC47	100	81.207	Chinchilla_lanigera
ENSPVAG00000009839	LRRC47	100	86.301	ENSCSAG00000000727	LRRC47	100	86.130	Chlorocebus_sabaeus
ENSPVAG00000009839	LRRC47	99	60.339	ENSCPBG00000019404	LRRC47	98	60.339	Chrysemys_picta_bellii
ENSPVAG00000009839	LRRC47	78	81.385	ENSCANG00000030701	LRRC47	96	81.169	Colobus_angolensis_palliatus
ENSPVAG00000009839	LRRC47	99	80.382	ENSCGRG00001015159	Lrrc47	90	79.174	Cricetulus_griseus_chok1gshd
ENSPVAG00000009839	LRRC47	65	72.751	ENSCGRG00000017336	Lrrc47	100	72.751	Cricetulus_griseus_crigri
ENSPVAG00000009839	LRRC47	99	52.539	ENSCSEG00000006217	lrrc47	95	53.240	Cynoglossus_semilaevis
ENSPVAG00000009839	LRRC47	64	76.190	ENSDORG00000016594	Lrrc47	99	75.862	Dipodomys_ordii
ENSPVAG00000009839	LRRC47	100	86.301	ENSEASG00005021788	LRRC47	100	86.301	Equus_asinus_asinus
ENSPVAG00000009839	LRRC47	99	86.528	ENSECAG00000022472	LRRC47	91	86.644	Equus_caballus
ENSPVAG00000009839	LRRC47	99	50.940	ENSELUG00000017544	lrrc47	98	51.453	Esox_lucius
ENSPVAG00000009839	LRRC47	94	84.672	ENSFCAG00000011632	LRRC47	97	85.353	Felis_catus
ENSPVAG00000009839	LRRC47	74	62.269	ENSFALG00000009631	LRRC47	99	62.471	Ficedula_albicollis
ENSPVAG00000009839	LRRC47	97	50.175	ENSGMOG00000015674	lrrc47	97	50.977	Gadus_morhua
ENSPVAG00000009839	LRRC47	99	60.967	ENSGALG00000050995	LRRC47	100	61.831	Gallus_gallus
ENSPVAG00000009839	LRRC47	98	53.333	ENSGACG00000005550	lrrc47	98	53.158	Gasterosteus_aculeatus
ENSPVAG00000009839	LRRC47	100	62.542	ENSGAGG00000022584	LRRC47	99	62.542	Gopherus_agassizii
ENSPVAG00000009839	LRRC47	100	84.906	ENSGGOG00000015571	LRRC47	100	85.959	Gorilla_gorilla
ENSPVAG00000009839	LRRC47	100	81.304	ENSHGLG00000018278	LRRC47	96	80.446	Heterocephalus_glaber_female
ENSPVAG00000009839	LRRC47	69	75.556	ENSHGLG00100008507	LRRC47	100	74.815	Heterocephalus_glaber_male
ENSPVAG00000009839	LRRC47	97	54.690	ENSHCOG00000006348	lrrc47	95	54.707	Hippocampus_comes
ENSPVAG00000009839	LRRC47	100	84.354	ENSSTOG00000027559	LRRC47	100	84.220	Ictidomys_tridecemlineatus
ENSPVAG00000009839	LRRC47	99	82.526	ENSJJAG00000017474	Lrrc47	97	81.990	Jaculus_jaculus
ENSPVAG00000009839	LRRC47	97	54.610	ENSKMAG00000003414	lrrc47	98	54.336	Kryptolebias_marmoratus
ENSPVAG00000009839	LRRC47	100	83.019	ENSLAFG00000011657	LRRC47	99	83.019	Loxodonta_africana
ENSPVAG00000009839	LRRC47	100	66.555	ENSMFAG00000045730	LRRC47	90	96.602	Macaca_fascicularis
ENSPVAG00000009839	LRRC47	99	86.183	ENSMNEG00000042488	LRRC47	99	86.106	Macaca_nemestrina
ENSPVAG00000009839	LRRC47	77	80.310	ENSMLEG00000043735	LRRC47	91	80.088	Mandrillus_leucophaeus
ENSPVAG00000009839	LRRC47	99	80.829	ENSMAUG00000021337	Lrrc47	98	79.793	Mesocricetus_auratus
ENSPVAG00000009839	LRRC47	100	84.075	ENSMICG00000026816	LRRC47	100	84.048	Microcebus_murinus
ENSPVAG00000009839	LRRC47	100	80.829	ENSMOCG00000021279	Lrrc47	100	80.484	Microtus_ochrogaster
ENSPVAG00000009839	LRRC47	99	52.890	ENSMMOG00000017007	lrrc47	99	52.890	Mola_mola
ENSPVAG00000009839	LRRC47	99	70.087	ENSMODG00000006554	LRRC47	100	70.478	Monodelphis_domestica
ENSPVAG00000009839	LRRC47	99	81.315	MGP_CAROLIEiJ_G0026864	Lrrc47	99	80.241	Mus_caroli
ENSPVAG00000009839	LRRC47	99	81.488	ENSMUSG00000029028	Lrrc47	99	80.412	Mus_musculus
ENSPVAG00000009839	LRRC47	99	80.416	MGP_PahariEiJ_G0029212	Lrrc47	99	80.584	Mus_pahari
ENSPVAG00000009839	LRRC47	99	81.488	MGP_SPRETEiJ_G0027857	Lrrc47	99	80.412	Mus_spretus
ENSPVAG00000009839	LRRC47	65	79.683	ENSMPUG00000007321	LRRC47	75	81.316	Mustela_putorius_furo
ENSPVAG00000009839	LRRC47	98	80.836	ENSNGAG00000022153	Lrrc47	99	81.818	Nannospalax_galili
ENSPVAG00000009839	LRRC47	100	80.789	ENSNLEG00000008131	LRRC47	100	80.789	Nomascus_leucogenys
ENSPVAG00000009839	LRRC47	84	77.393	ENSODEG00000010882	LRRC47	93	77.189	Octodon_degus
ENSPVAG00000009839	LRRC47	96	53.125	ENSORLG00000002532	lrrc47	99	54.234	Oryzias_latipes
ENSPVAG00000009839	LRRC47	99	53.288	ENSORLG00020019601	lrrc47	99	54.371	Oryzias_latipes_hni
ENSPVAG00000009839	LRRC47	99	52.782	ENSORLG00015014040	lrrc47	99	53.846	Oryzias_latipes_hsok
ENSPVAG00000009839	LRRC47	99	54.073	ENSOMEG00000008989	lrrc47	99	53.846	Oryzias_melastigma
ENSPVAG00000009839	LRRC47	100	82.161	ENSOGAG00000001553	LRRC47	100	82.161	Otolemur_garnettii
ENSPVAG00000009839	LRRC47	99	82.180	ENSOARG00000015290	LRRC47	99	82.847	Ovis_aries
ENSPVAG00000009839	LRRC47	98	80.094	ENSPPAG00000036370	-	100	81.542	Pan_paniscus
ENSPVAG00000009839	LRRC47	99	85.813	ENSPPRG00000005261	LRRC47	99	85.052	Panthera_pardus
ENSPVAG00000009839	LRRC47	100	84.734	ENSPTRG00000000068	LRRC47	100	85.788	Pan_troglodytes
ENSPVAG00000009839	LRRC47	100	86.473	ENSPANG00000012437	LRRC47	100	86.301	Papio_anubis
ENSPVAG00000009839	LRRC47	65	64.021	ENSPSIG00000004196	LRRC47	100	64.021	Pelodiscus_sinensis
ENSPVAG00000009839	LRRC47	65	73.016	ENSPEMG00000021068	Lrrc47	100	74.339	Peromyscus_maniculatus_bairdii
ENSPVAG00000009839	LRRC47	98	72.949	ENSPCIG00000003638	LRRC47	100	72.867	Phascolarctos_cinereus
ENSPVAG00000009839	LRRC47	93	55.351	ENSPFOG00000000992	lrrc47	94	55.351	Poecilia_formosa
ENSPVAG00000009839	LRRC47	98	55.692	ENSPLAG00000008077	lrrc47	99	55.692	Poecilia_latipinna
ENSPVAG00000009839	LRRC47	98	55.323	ENSPMEG00000007367	lrrc47	99	55.323	Poecilia_mexicana
ENSPVAG00000009839	LRRC47	100	84.563	ENSPPYG00000001960	LRRC47	100	85.616	Pongo_abelii
ENSPVAG00000009839	LRRC47	99	84.948	ENSPCOG00000019161	LRRC47	99	85.052	Propithecus_coquereli
ENSPVAG00000009839	LRRC47	100	52.560	ENSPNAG00000017982	lrrc47	100	53.012	Pygocentrus_nattereri
ENSPVAG00000009839	LRRC47	99	79.553	ENSRNOG00000024796	Lrrc47	99	79.897	Rattus_norvegicus
ENSPVAG00000009839	LRRC47	100	86.815	ENSRBIG00000019437	LRRC47	100	86.644	Rhinopithecus_bieti
ENSPVAG00000009839	LRRC47	100	86.815	ENSRROG00000043182	LRRC47	100	86.644	Rhinopithecus_roxellana
ENSPVAG00000009839	LRRC47	91	80.574	ENSSBOG00000026334	LRRC47	97	79.245	Saimiri_boliviensis_boliviensis
ENSPVAG00000009839	LRRC47	98	59.278	ENSSHAG00000007360	LRRC47	100	59.696	Sarcophilus_harrisii
ENSPVAG00000009839	LRRC47	98	54.276	ENSSMAG00000009344	lrrc47	99	54.276	Scophthalmus_maximus
ENSPVAG00000009839	LRRC47	99	53.229	ENSSDUG00000014618	lrrc47	99	53.671	Seriola_dumerili
ENSPVAG00000009839	LRRC47	99	54.101	ENSSLDG00000018908	lrrc47	99	53.846	Seriola_lalandi_dorsalis
ENSPVAG00000009839	LRRC47	99	60.068	ENSSPUG00000010277	LRRC47	99	60.642	Sphenodon_punctatus
ENSPVAG00000009839	LRRC47	99	55.148	ENSSPAG00000005188	lrrc47	99	55.226	Stegastes_partitus
ENSPVAG00000009839	LRRC47	99	84.880	ENSSSCG00000039516	LRRC47	99	85.763	Sus_scrofa
ENSPVAG00000009839	LRRC47	70	63.636	ENSTGUG00000002737	LRRC47	99	63.391	Taeniopygia_guttata
ENSPVAG00000009839	LRRC47	97	53.180	ENSTRUG00000017696	lrrc47	98	51.865	Takifugu_rubripes
ENSPVAG00000009839	LRRC47	99	51.923	ENSTNIG00000010923	lrrc47	99	51.489	Tetraodon_nigroviridis
ENSPVAG00000009839	LRRC47	100	83.733	ENSTTRG00000011751	LRRC47	100	83.590	Tursiops_truncatus
ENSPVAG00000009839	LRRC47	88	83.852	ENSUAMG00000012080	LRRC47	97	84.241	Ursus_americanus
ENSPVAG00000009839	LRRC47	65	79.319	ENSUMAG00000010781	LRRC47	81	79.843	Ursus_maritimus
ENSPVAG00000009839	LRRC47	99	77.250	ENSVVUG00000027118	LRRC47	99	75.939	Vulpes_vulpes
ENSPVAG00000009839	LRRC47	99	59.107	ENSXETG00000006029	lrrc47	99	58.763	Xenopus_tropicalis
ENSPVAG00000009839	LRRC47	98	55.536	ENSXCOG00000002813	lrrc47	98	55.536	Xiphophorus_couchianus
ENSPVAG00000009839	LRRC47	98	55.692	ENSXMAG00000019386	lrrc47	99	55.517	Xiphophorus_maculatus