EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000010486 (Gene tree)
Gene ID: -
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 4
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 4551 bases
Position: chrGeneScaffold_3156:76831-81381
Accession: 105297954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000009880	zf-CCHC	PF00098.23	1.1e-07	1	1
ENSPVAP00000009880	RRM_5	PF13893.6	1.9e-08	1	2
ENSPVAP00000009880	RRM_5	PF13893.6	1.9e-08	2	2
ENSPVAP00000009880	RRM_1	PF00076.22	1.1e-34	1	2
ENSPVAP00000009880	RRM_1	PF00076.22	1.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000010485	RBM4-201	1098	-	ENSPVAP00000009880	365 (aa)	XP_023391614	UPI00018B3EC1

Gene Model

Click here to download ENSPVAG00000010486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000010486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000010486	RBM4	100	88.219	ENSPVAG00000010487	RBM4B	100	87.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000010486	RBM4	100	87.671	ENSG00000173914	RBM4B	97	97.842	Homo_sapiens
ENSPVAG00000010486	RBM4	99	72.404	ENSG00000248643	RBM14-RBM4	100	73.224	Homo_sapiens
ENSPVAG00000010486	RBM4	100	98.356	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSPVAG00000010486	RBM4	100	88.219	ENSAMEG00000010906	RBM4B	100	87.671	Ailuropoda_melanoleuca
ENSPVAG00000010486	RBM4	100	99.178	ENSAMEG00000010914	RBM4	100	99.178	Ailuropoda_melanoleuca
ENSPVAG00000010486	RBM4	100	87.397	ENSANAG00000023478	RBM4B	97	97.842	Aotus_nancymaae
ENSPVAG00000010486	RBM4	100	88.493	ENSBTAG00000000423	RBM4B	100	87.945	Bos_taurus
ENSPVAG00000010486	RBM4	100	97.808	ENSBTAG00000031688	RBM4	100	97.808	Bos_taurus
ENSPVAG00000010486	RBM4	100	87.397	ENSCJAG00000013666	RBM4B	97	97.842	Callithrix_jacchus
ENSPVAG00000010486	RBM4	100	99.178	ENSCAFG00000012388	RBM4	100	99.178	Canis_familiaris
ENSPVAG00000010486	RBM4	100	87.945	ENSCAFG00000012378	RBM4B	100	87.397	Canis_familiaris
ENSPVAG00000010486	RBM4	100	87.945	ENSCAFG00020015519	RBM4B	100	87.397	Canis_lupus_dingo
ENSPVAG00000010486	RBM4	100	99.178	ENSCAFG00020015515	RBM4	100	99.178	Canis_lupus_dingo
ENSPVAG00000010486	RBM4	100	88.493	ENSCHIG00000008907	RBM4B	100	87.945	Capra_hircus
ENSPVAG00000010486	RBM4	100	97.808	ENSCHIG00000020613	RBM4	100	97.808	Capra_hircus
ENSPVAG00000010486	RBM4	66	79.253	ENSTSYG00000009580	RBM4B	96	78.423	Carlito_syrichta
ENSPVAG00000010486	RBM4	100	98.904	ENSCAPG00000016600	RBM4	100	98.904	Cavia_aperea
ENSPVAG00000010486	RBM4	100	87.397	ENSCAPG00000009570	RBM4B	100	87.123	Cavia_aperea
ENSPVAG00000010486	RBM4	100	98.904	ENSCPOG00000013194	RBM4	100	98.904	Cavia_porcellus
ENSPVAG00000010486	RBM4	100	87.397	ENSCPOG00000013689	RBM4B	100	87.123	Cavia_porcellus
ENSPVAG00000010486	RBM4	55	73.632	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSPVAG00000010486	RBM4	100	87.671	ENSCCAG00000016501	RBM4B	97	97.842	Cebus_capucinus
ENSPVAG00000010486	RBM4	100	87.671	ENSCATG00000035353	RBM4B	97	97.842	Cercocebus_atys
ENSPVAG00000010486	RBM4	100	87.671	ENSCLAG00000015287	RBM4B	100	87.123	Chinchilla_lanigera
ENSPVAG00000010486	RBM4	100	98.630	ENSCLAG00000014756	RBM4	100	98.630	Chinchilla_lanigera
ENSPVAG00000010486	RBM4	100	87.671	ENSCSAG00000008361	RBM4B	100	87.123	Chlorocebus_sabaeus
ENSPVAG00000010486	RBM4	62	98.238	ENSCHOG00000009753	RBM14-RBM4	100	98.238	Choloepus_hoffmanni
ENSPVAG00000010486	RBM4	100	88.767	ENSCHOG00000002892	RBM4B	100	88.219	Choloepus_hoffmanni
ENSPVAG00000010486	RBM4	100	74.674	ENSCPBG00000023800	-	100	73.822	Chrysemys_picta_bellii
ENSPVAG00000010486	RBM4	100	87.671	ENSCANG00000021868	RBM4B	97	97.842	Colobus_angolensis_palliatus
ENSPVAG00000010486	RBM4	100	84.658	ENSCGRG00001024693	Rbm4b	100	85.205	Cricetulus_griseus_chok1gshd
ENSPVAG00000010486	RBM4	100	94.521	ENSCGRG00001016609	-	97	98.551	Cricetulus_griseus_chok1gshd
ENSPVAG00000010486	RBM4	100	84.658	ENSCGRG00000012112	Rbm4b	100	85.205	Cricetulus_griseus_crigri
ENSPVAG00000010486	RBM4	100	94.521	ENSCGRG00000010183	-	97	98.551	Cricetulus_griseus_crigri
ENSPVAG00000010486	RBM4	100	87.123	ENSDNOG00000045639	-	100	86.575	Dasypus_novemcinctus
ENSPVAG00000010486	RBM4	100	88.219	ENSDNOG00000019500	-	100	87.671	Dasypus_novemcinctus
ENSPVAG00000010486	RBM4	100	98.630	ENSDNOG00000032390	RBM4	100	98.630	Dasypus_novemcinctus
ENSPVAG00000010486	RBM4	100	94.247	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
ENSPVAG00000010486	RBM4	100	84.932	ENSDORG00000029108	Rbm4b	100	85.479	Dipodomys_ordii
ENSPVAG00000010486	RBM4	62	63.877	ENSETEG00000018142	-	100	64.317	Echinops_telfairi
ENSPVAG00000010486	RBM4	100	97.808	ENSEASG00005005064	RBM4	100	97.808	Equus_asinus_asinus
ENSPVAG00000010486	RBM4	100	87.945	ENSEASG00005005068	RBM4B	100	87.397	Equus_asinus_asinus
ENSPVAG00000010486	RBM4	100	97.808	ENSECAG00000022940	RBM4	100	97.808	Equus_caballus
ENSPVAG00000010486	RBM4	100	87.671	ENSECAG00000022987	RBM4B	100	87.123	Equus_caballus
ENSPVAG00000010486	RBM4	100	87.978	ENSEEUG00000000058	RBM4B	100	87.123	Erinaceus_europaeus
ENSPVAG00000010486	RBM4	100	87.671	ENSFCAG00000007394	RBM4B	97	97.842	Felis_catus
ENSPVAG00000010486	RBM4	100	99.178	ENSFCAG00000029651	RBM4	100	99.178	Felis_catus
ENSPVAG00000010486	RBM4	100	68.817	ENSFALG00000002073	-	100	67.925	Ficedula_albicollis
ENSPVAG00000010486	RBM4	100	98.082	ENSFDAG00000005447	RBM4	100	98.082	Fukomys_damarensis
ENSPVAG00000010486	RBM4	100	87.671	ENSFDAG00000015530	RBM4B	100	87.123	Fukomys_damarensis
ENSPVAG00000010486	RBM4	100	76.923	ENSGALG00000037946	-	100	75.000	Gallus_gallus
ENSPVAG00000010486	RBM4	100	75.781	ENSGAGG00000008553	-	100	74.151	Gopherus_agassizii
ENSPVAG00000010486	RBM4	100	87.671	ENSGGOG00000011698	RBM4B	97	97.842	Gorilla_gorilla
ENSPVAG00000010486	RBM4	100	87.945	ENSHGLG00000016412	-	100	87.397	Heterocephalus_glaber_female
ENSPVAG00000010486	RBM4	100	98.082	ENSHGLG00000009991	RBM4	100	98.082	Heterocephalus_glaber_female
ENSPVAG00000010486	RBM4	100	73.425	ENSHGLG00000002853	-	100	73.425	Heterocephalus_glaber_female
ENSPVAG00000010486	RBM4	79	55.952	ENSHGLG00000000117	-	95	65.753	Heterocephalus_glaber_female
ENSPVAG00000010486	RBM4	96	74.499	ENSHGLG00100020033	-	100	74.499	Heterocephalus_glaber_male
ENSPVAG00000010486	RBM4	100	84.658	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSPVAG00000010486	RBM4	100	87.158	ENSHGLG00100003978	-	100	86.612	Heterocephalus_glaber_male
ENSPVAG00000010486	RBM4	100	87.671	ENSSTOG00000011226	RBM4B	100	87.397	Ictidomys_tridecemlineatus
ENSPVAG00000010486	RBM4	100	98.904	ENSSTOG00000022811	RBM4	100	98.904	Ictidomys_tridecemlineatus
ENSPVAG00000010486	RBM4	100	84.384	ENSJJAG00000020870	Rbm4b	100	84.110	Jaculus_jaculus
ENSPVAG00000010486	RBM4	100	83.836	ENSLAFG00000002285	RBM4B	100	84.384	Loxodonta_africana
ENSPVAG00000010486	RBM4	100	96.164	ENSLAFG00000028147	-	100	96.164	Loxodonta_africana
ENSPVAG00000010486	RBM4	100	87.671	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSPVAG00000010486	RBM4	100	87.671	ENSMNEG00000043371	RBM4B	97	97.842	Macaca_nemestrina
ENSPVAG00000010486	RBM4	100	87.671	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSPVAG00000010486	RBM4	100	84.658	ENSMAUG00000017027	Rbm4b	100	84.932	Mesocricetus_auratus
ENSPVAG00000010486	RBM4	100	88.219	ENSMICG00000003820	RBM4B	97	97.842	Microcebus_murinus
ENSPVAG00000010486	RBM4	100	84.384	ENSMOCG00000001835	Rbm4b	100	84.932	Microtus_ochrogaster
ENSPVAG00000010486	RBM4	100	90.761	ENSMODG00000008056	-	100	91.033	Monodelphis_domestica
ENSPVAG00000010486	RBM4	99	67.847	MGP_CAROLIEiJ_G0022514	-	100	68.665	Mus_caroli
ENSPVAG00000010486	RBM4	100	85.205	MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	Mus_caroli
ENSPVAG00000010486	RBM4	100	92.350	MGP_CAROLIEiJ_G0022516	-	97	98.551	Mus_caroli
ENSPVAG00000010486	RBM4	100	92.350	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSPVAG00000010486	RBM4	100	84.932	ENSMUSG00000033760	Rbm4b	91	97.842	Mus_musculus
ENSPVAG00000010486	RBM4	100	92.350	ENSMUSG00000096370	Gm21992	100	93.169	Mus_musculus
ENSPVAG00000010486	RBM4	100	92.623	MGP_PahariEiJ_G0014013	-	97	98.551	Mus_pahari
ENSPVAG00000010486	RBM4	100	84.658	MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	Mus_pahari
ENSPVAG00000010486	RBM4	100	92.623	MGP_PahariEiJ_G0014011	-	100	93.169	Mus_pahari
ENSPVAG00000010486	RBM4	100	75.610	MGP_SPRETEiJ_G0023428	-	94	76.524	Mus_spretus
ENSPVAG00000010486	RBM4	100	73.958	MGP_SPRETEiJ_G0023429	-	100	74.653	Mus_spretus
ENSPVAG00000010486	RBM4	100	75.610	MGP_SPRETEiJ_G0023430	-	100	76.524	Mus_spretus
ENSPVAG00000010486	RBM4	100	99.452	ENSMPUG00000003443	RBM4	100	99.452	Mustela_putorius_furo
ENSPVAG00000010486	RBM4	100	88.493	ENSMPUG00000003450	RBM4B	100	87.945	Mustela_putorius_furo
ENSPVAG00000010486	RBM4	100	86.301	ENSMLUG00000001290	RBM4B	100	85.479	Myotis_lucifugus
ENSPVAG00000010486	RBM4	99	96.970	ENSMLUG00000004076	RBM4	95	96.970	Myotis_lucifugus
ENSPVAG00000010486	RBM4	100	86.066	ENSNGAG00000016292	Rbm4b	100	85.753	Nannospalax_galili
ENSPVAG00000010486	RBM4	100	98.356	ENSNLEG00000035021	RBM4	100	98.356	Nomascus_leucogenys
ENSPVAG00000010486	RBM4	100	86.849	ENSNLEG00000006213	RBM4B	97	97.842	Nomascus_leucogenys
ENSPVAG00000010486	RBM4	62	85.903	ENSMEUG00000005739	-	100	85.903	Notamacropus_eugenii
ENSPVAG00000010486	RBM4	100	88.767	ENSMEUG00000001445	-	100	87.945	Notamacropus_eugenii
ENSPVAG00000010486	RBM4	100	97.808	ENSOPRG00000009149	RBM4	100	97.808	Ochotona_princeps
ENSPVAG00000010486	RBM4	100	88.493	ENSOPRG00000009158	RBM4B	100	87.671	Ochotona_princeps
ENSPVAG00000010486	RBM4	100	78.630	ENSODEG00000001866	-	100	79.178	Octodon_degus
ENSPVAG00000010486	RBM4	100	87.671	ENSODEG00000017696	-	100	87.397	Octodon_degus
ENSPVAG00000010486	RBM4	100	85.205	ENSOANG00000011036	-	100	84.110	Ornithorhynchus_anatinus
ENSPVAG00000010486	RBM4	100	78.630	ENSOANG00000003143	-	84	78.356	Ornithorhynchus_anatinus
ENSPVAG00000010486	RBM4	100	87.945	ENSOCUG00000006695	LARK	100	87.397	Oryctolagus_cuniculus
ENSPVAG00000010486	RBM4	100	98.904	ENSOCUG00000004731	RBM4	100	98.904	Oryctolagus_cuniculus
ENSPVAG00000010486	RBM4	100	98.356	ENSOGAG00000015647	RBM4	100	98.356	Otolemur_garnettii
ENSPVAG00000010486	RBM4	100	87.945	ENSOGAG00000015648	RBM4B	100	87.397	Otolemur_garnettii
ENSPVAG00000010486	RBM4	100	88.219	ENSOARG00000007759	RBM4B	100	88.493	Ovis_aries
ENSPVAG00000010486	RBM4	100	93.973	ENSOARG00000007700	RBM4	100	94.521	Ovis_aries
ENSPVAG00000010486	RBM4	100	87.671	ENSPPAG00000015125	RBM4B	97	97.842	Pan_paniscus
ENSPVAG00000010486	RBM4	100	99.178	ENSPPRG00000003533	RBM4	100	99.178	Panthera_pardus
ENSPVAG00000010486	RBM4	100	87.123	ENSPPRG00000003388	RBM4B	97	97.842	Panthera_pardus
ENSPVAG00000010486	RBM4	100	87.123	ENSPTIG00000015426	RBM4B	97	97.842	Panthera_tigris_altaica
ENSPVAG00000010486	RBM4	100	84.658	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSPVAG00000010486	RBM4	100	87.671	ENSPTRG00000003935	RBM4B	97	97.842	Pan_troglodytes
ENSPVAG00000010486	RBM4	100	87.671	ENSPANG00000020672	RBM4B	97	97.842	Papio_anubis
ENSPVAG00000010486	RBM4	76	77.855	ENSPSIG00000003477	-	95	77.397	Pelodiscus_sinensis
ENSPVAG00000010486	RBM4	100	74.801	ENSPSIG00000003430	-	100	73.936	Pelodiscus_sinensis
ENSPVAG00000010486	RBM4	100	85.205	ENSPEMG00000009144	Rbm4b	100	85.479	Peromyscus_maniculatus_bairdii
ENSPVAG00000010486	RBM4	100	87.671	ENSPPYG00000003010	RBM4B	100	87.123	Pongo_abelii
ENSPVAG00000010486	RBM4	100	97.260	ENSPPYG00000003012	RBM4	100	97.260	Pongo_abelii
ENSPVAG00000010486	RBM4	100	96.986	ENSPCAG00000003393	-	100	96.986	Procavia_capensis
ENSPVAG00000010486	RBM4	100	87.945	ENSPCOG00000027885	RBM4B	97	97.842	Propithecus_coquereli
ENSPVAG00000010486	RBM4	100	85.479	ENSRNOG00000061795	Rbm4b	100	86.027	Rattus_norvegicus
ENSPVAG00000010486	RBM4	100	96.448	ENSRNOG00000050741	Rbm4	100	96.448	Rattus_norvegicus
ENSPVAG00000010486	RBM4	100	87.671	ENSRBIG00000019394	RBM4B	97	97.842	Rhinopithecus_bieti
ENSPVAG00000010486	RBM4	100	87.671	ENSRROG00000032850	RBM4B	97	97.842	Rhinopithecus_roxellana
ENSPVAG00000010486	RBM4	100	87.123	ENSSBOG00000034474	RBM4B	97	97.122	Saimiri_boliviensis_boliviensis
ENSPVAG00000010486	RBM4	100	86.575	ENSSHAG00000008386	-	100	86.301	Sarcophilus_harrisii
ENSPVAG00000010486	RBM4	100	87.671	ENSSARG00000010710	RBM4B	100	87.123	Sorex_araneus
ENSPVAG00000010486	RBM4	100	99.178	ENSSSCG00000032437	RBM4	100	99.178	Sus_scrofa
ENSPVAG00000010486	RBM4	77	78.840	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSPVAG00000010486	RBM4	64	99.545	ENSTBEG00000003727	-	70	99.545	Tupaia_belangeri
ENSPVAG00000010486	RBM4	100	86.027	ENSTBEG00000003748	RBM4B	100	85.753	Tupaia_belangeri
ENSPVAG00000010486	RBM4	100	97.808	ENSTTRG00000011164	RBM4	100	97.808	Tursiops_truncatus
ENSPVAG00000010486	RBM4	100	87.945	ENSTTRG00000011166	RBM4B	100	87.397	Tursiops_truncatus
ENSPVAG00000010486	RBM4	100	88.493	ENSUAMG00000004745	RBM4B	100	87.945	Ursus_americanus
ENSPVAG00000010486	RBM4	100	99.178	ENSUAMG00000014882	RBM4	100	99.178	Ursus_americanus
ENSPVAG00000010486	RBM4	64	99.574	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSPVAG00000010486	RBM4	100	87.945	ENSVPAG00000001950	RBM4B	100	87.397	Vicugna_pacos
ENSPVAG00000010486	RBM4	100	96.712	ENSVPAG00000001949	RBM4	100	96.712	Vicugna_pacos
ENSPVAG00000010486	RBM4	100	98.630	ENSVVUG00000010622	RBM4	100	98.630	Vulpes_vulpes
ENSPVAG00000010486	RBM4	100	87.945	ENSVVUG00000010619	RBM4B	100	87.397	Vulpes_vulpes