EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000010709 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 8830 bases
Position: chrGeneScaffold_928:2672-11501
Accession: 604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000010090	APOBEC_N	PF08210.11	1.2e-22	1	1
ENSPVAP00000010090	APOBEC_C	PF05240.14	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000010709	APOBEC1-201	702	-	ENSPVAP00000010090	233 (aa)	-	UPI00018B1102

Gene Model

Click here to download ENSPVAG00000010709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000010709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000010709	APOBEC1	100	64.407	ENSG00000111701	APOBEC1	100	64.407	Homo_sapiens
ENSPVAG00000010709	APOBEC1	98	64.348	ENSAMEG00000007098	APOBEC1	98	64.348	Ailuropoda_melanoleuca
ENSPVAG00000010709	APOBEC1	54	42.063	ENSACAG00000028578	-	69	42.063	Anolis_carolinensis
ENSPVAG00000010709	APOBEC1	100	64.407	ENSANAG00000027743	APOBEC1	95	64.407	Aotus_nancymaae
ENSPVAG00000010709	APOBEC1	100	59.322	ENSBTAG00000014683	APOBEC1	100	59.322	Bos_taurus
ENSPVAG00000010709	APOBEC1	94	62.896	ENSCJAG00000005398	APOBEC1	100	62.896	Callithrix_jacchus
ENSPVAG00000010709	APOBEC1	100	63.559	ENSCAFG00000013901	APOBEC1	100	63.559	Canis_familiaris
ENSPVAG00000010709	APOBEC1	96	61.504	ENSCAFG00020003511	APOBEC1	95	61.504	Canis_lupus_dingo
ENSPVAG00000010709	APOBEC1	98	58.874	ENSCHIG00000011898	APOBEC1	96	58.874	Capra_hircus
ENSPVAG00000010709	APOBEC1	61	85.106	ENSTSYG00000029141	APOBEC1	100	85.106	Carlito_syrichta
ENSPVAG00000010709	APOBEC1	91	50.698	ENSCAPG00000015882	-	100	50.698	Cavia_aperea
ENSPVAG00000010709	APOBEC1	99	51.064	ENSCPOG00000033068	APOBEC1	99	51.064	Cavia_porcellus
ENSPVAG00000010709	APOBEC1	100	64.407	ENSCCAG00000022258	APOBEC1	100	64.407	Cebus_capucinus
ENSPVAG00000010709	APOBEC1	100	65.254	ENSCATG00000021613	APOBEC1	95	65.254	Cercocebus_atys
ENSPVAG00000010709	APOBEC1	97	52.321	ENSCLAG00000014645	APOBEC1	100	52.321	Chinchilla_lanigera
ENSPVAG00000010709	APOBEC1	80	61.053	ENSCSAG00000009817	APOBEC1	99	61.053	Chlorocebus_sabaeus
ENSPVAG00000010709	APOBEC1	61	47.917	ENSCPBG00000014335	-	58	47.917	Chrysemys_picta_bellii
ENSPVAG00000010709	APOBEC1	61	45.833	ENSCPBG00000014331	-	60	45.833	Chrysemys_picta_bellii
ENSPVAG00000010709	APOBEC1	61	37.324	ENSCPBG00000014327	-	55	37.324	Chrysemys_picta_bellii
ENSPVAG00000010709	APOBEC1	51	47.059	ENSCPBG00000014328	-	52	47.059	Chrysemys_picta_bellii
ENSPVAG00000010709	APOBEC1	60	41.667	ENSCPBG00000017398	-	63	41.667	Chrysemys_picta_bellii
ENSPVAG00000010709	APOBEC1	97	64.783	ENSCANG00000038359	APOBEC1	100	64.783	Colobus_angolensis_palliatus
ENSPVAG00000010709	APOBEC1	97	57.205	ENSCGRG00001011130	Apobec1	100	57.205	Cricetulus_griseus_chok1gshd
ENSPVAG00000010709	APOBEC1	97	57.205	ENSCGRG00000008644	Apobec1	100	57.205	Cricetulus_griseus_crigri
ENSPVAG00000010709	APOBEC1	100	63.136	ENSDNOG00000010926	APOBEC1	100	63.136	Dasypus_novemcinctus
ENSPVAG00000010709	APOBEC1	90	52.336	ENSDORG00000023717	Apobec1	100	52.336	Dipodomys_ordii
ENSPVAG00000010709	APOBEC1	99	58.723	ENSETEG00000004867	APOBEC1	99	58.723	Echinops_telfairi
ENSPVAG00000010709	APOBEC1	98	66.667	ENSEASG00005015951	APOBEC1	97	66.667	Equus_asinus_asinus
ENSPVAG00000010709	APOBEC1	80	63.684	ENSECAG00000017163	APOBEC1	99	63.684	Equus_caballus
ENSPVAG00000010709	APOBEC1	91	50.000	ENSEEUG00000009112	-	96	50.000	Erinaceus_europaeus
ENSPVAG00000010709	APOBEC1	86	71.078	ENSEEUG00000007530	-	97	71.078	Erinaceus_europaeus
ENSPVAG00000010709	APOBEC1	100	68.644	ENSFCAG00000009350	APOBEC1	100	68.644	Felis_catus
ENSPVAG00000010709	APOBEC1	55	45.736	ENSFALG00000007257	-	63	45.736	Ficedula_albicollis
ENSPVAG00000010709	APOBEC1	88	39.130	ENSFDAG00000018470	APOBEC1	99	39.130	Fukomys_damarensis
ENSPVAG00000010709	APOBEC1	52	53.279	ENSGAGG00000004947	-	76	53.279	Gopherus_agassizii
ENSPVAG00000010709	APOBEC1	57	52.239	ENSGAGG00000011837	-	68	53.175	Gopherus_agassizii
ENSPVAG00000010709	APOBEC1	99	48.511	ENSHGLG00000001495	APOBEC1	99	48.511	Heterocephalus_glaber_female
ENSPVAG00000010709	APOBEC1	99	47.234	ENSHGLG00100002187	APOBEC1	99	47.234	Heterocephalus_glaber_male
ENSPVAG00000010709	APOBEC1	91	63.084	ENSSTOG00000021971	APOBEC1	100	84.694	Ictidomys_tridecemlineatus
ENSPVAG00000010709	APOBEC1	97	61.572	ENSJJAG00000022108	Apobec1	100	61.572	Jaculus_jaculus
ENSPVAG00000010709	APOBEC1	94	63.229	ENSLAFG00000030837	APOBEC1	100	63.229	Loxodonta_africana
ENSPVAG00000010709	APOBEC1	100	65.678	ENSMFAG00000000277	APOBEC1	100	65.678	Macaca_fascicularis
ENSPVAG00000010709	APOBEC1	100	65.678	ENSMNEG00000029670	APOBEC1	100	65.678	Macaca_nemestrina
ENSPVAG00000010709	APOBEC1	100	65.254	ENSMLEG00000036301	APOBEC1	100	65.254	Mandrillus_leucophaeus
ENSPVAG00000010709	APOBEC1	91	54.167	ENSMAUG00000022167	Apobec1	97	54.167	Mesocricetus_auratus
ENSPVAG00000010709	APOBEC1	100	63.559	ENSMICG00000043645	APOBEC1	100	63.559	Microcebus_murinus
ENSPVAG00000010709	APOBEC1	100	54.237	ENSMODG00000018004	APOBEC1	100	54.237	Monodelphis_domestica
ENSPVAG00000010709	APOBEC1	97	53.947	ENSMUSG00000040613	Apobec1	99	68.750	Mus_musculus
ENSPVAG00000010709	APOBEC1	97	53.070	MGP_PahariEiJ_G0022580	-	99	66.071	Mus_pahari
ENSPVAG00000010709	APOBEC1	97	53.947	MGP_SPRETEiJ_G0029857	Apobec1	99	68.750	Mus_spretus
ENSPVAG00000010709	APOBEC1	100	66.102	ENSMPUG00000017532	APOBEC1	100	66.102	Mustela_putorius_furo
ENSPVAG00000010709	APOBEC1	97	57.205	ENSNGAG00000022607	Apobec1	100	57.205	Nannospalax_galili
ENSPVAG00000010709	APOBEC1	100	65.254	ENSNLEG00000005342	APOBEC1	100	65.254	Nomascus_leucogenys
ENSPVAG00000010709	APOBEC1	100	53.814	ENSMEUG00000013406	APOBEC1	100	53.814	Notamacropus_eugenii
ENSPVAG00000010709	APOBEC1	59	66.667	ENSOPRG00000009508	-	77	66.667	Ochotona_princeps
ENSPVAG00000010709	APOBEC1	100	59.746	ENSOCUG00000025736	APOBEC1	88	59.746	Oryctolagus_cuniculus
ENSPVAG00000010709	APOBEC1	98	62.771	ENSOGAG00000026415	APOBEC1	98	62.771	Otolemur_garnettii
ENSPVAG00000010709	APOBEC1	100	59.746	ENSOARG00000002072	APOBEC1	99	59.746	Ovis_aries
ENSPVAG00000010709	APOBEC1	98	58.009	ENSPPAG00000027657	APOBEC1	98	58.009	Pan_paniscus
ENSPVAG00000010709	APOBEC1	100	69.068	ENSPPRG00000012182	APOBEC1	100	69.068	Panthera_pardus
ENSPVAG00000010709	APOBEC1	100	69.068	ENSPTIG00000020280	APOBEC1	100	69.068	Panthera_tigris_altaica
ENSPVAG00000010709	APOBEC1	100	65.254	ENSPTRG00000004614	APOBEC1	100	65.254	Pan_troglodytes
ENSPVAG00000010709	APOBEC1	100	64.831	ENSPANG00000021027	APOBEC1	100	64.831	Papio_anubis
ENSPVAG00000010709	APOBEC1	61	42.657	ENSPSIG00000012568	-	62	42.657	Pelodiscus_sinensis
ENSPVAG00000010709	APOBEC1	97	55.459	ENSPEMG00000023841	Apobec1	100	55.459	Peromyscus_maniculatus_bairdii
ENSPVAG00000010709	APOBEC1	100	56.780	ENSPCIG00000023973	APOBEC1	100	56.780	Phascolarctos_cinereus
ENSPVAG00000010709	APOBEC1	100	63.559	ENSPPYG00000004228	APOBEC1	95	63.559	Pongo_abelii
ENSPVAG00000010709	APOBEC1	63	78.912	ENSPCAG00000008733	APOBEC1	79	78.912	Procavia_capensis
ENSPVAG00000010709	APOBEC1	94	63.964	ENSPCOG00000013957	APOBEC1	98	63.964	Propithecus_coquereli
ENSPVAG00000010709	APOBEC1	97	55.263	ENSRNOG00000015411	Apobec1	99	55.263	Rattus_norvegicus
ENSPVAG00000010709	APOBEC1	100	63.983	ENSRBIG00000031161	APOBEC1	100	63.983	Rhinopithecus_bieti
ENSPVAG00000010709	APOBEC1	100	63.983	ENSRROG00000033576	APOBEC1	100	63.983	Rhinopithecus_roxellana
ENSPVAG00000010709	APOBEC1	57	83.459	ENSSBOG00000030587	APOBEC1	75	83.459	Saimiri_boliviensis_boliviensis
ENSPVAG00000010709	APOBEC1	96	55.947	ENSSHAG00000008925	APOBEC1	99	55.947	Sarcophilus_harrisii
ENSPVAG00000010709	APOBEC1	56	72.519	ENSSARG00000011972	-	99	72.519	Sorex_araneus
ENSPVAG00000010709	APOBEC1	56	70.000	ENSSARG00000000032	-	75	70.000	Sorex_araneus
ENSPVAG00000010709	APOBEC1	57	45.588	ENSSPUG00000009044	-	52	45.588	Sphenodon_punctatus
ENSPVAG00000010709	APOBEC1	100	62.288	ENSSSCG00000000668	APOBEC1	100	62.288	Sus_scrofa
ENSPVAG00000010709	APOBEC1	56	46.565	ENSTGUG00000013118	-	89	46.565	Taeniopygia_guttata
ENSPVAG00000010709	APOBEC1	94	59.091	ENSTBEG00000010043	APOBEC1	94	59.091	Tupaia_belangeri
ENSPVAG00000010709	APOBEC1	62	79.167	ENSTTRG00000014015	APOBEC1	77	79.167	Tursiops_truncatus
ENSPVAG00000010709	APOBEC1	98	63.636	ENSUAMG00000011636	APOBEC1	95	63.636	Ursus_americanus
ENSPVAG00000010709	APOBEC1	98	63.636	ENSUMAG00000016552	APOBEC1	95	63.636	Ursus_maritimus
ENSPVAG00000010709	APOBEC1	100	61.441	ENSVPAG00000001343	APOBEC1	100	61.441	Vicugna_pacos
ENSPVAG00000010709	APOBEC1	100	63.983	ENSVVUG00000010522	APOBEC1	100	63.983	Vulpes_vulpes