EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000010736 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 1962 bases
Position: chrGeneScaffold_1662:143534-145495
Accession: 105308944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000010114	Exo_endo_phos	PF03372.23	3.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000010735	APEX1-201	963	-	ENSPVAP00000010114	320 (aa)	XP_011383324	UPI00018B2A26

Gene Model

Click here to download ENSPVAG00000010736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000010736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000010736	APEX1	100	95.312	ENSG00000100823	APEX1	100	95.312	Homo_sapiens
ENSPVAG00000010736	APEX1	87	69.176	ENSAPOG00000017002	apex1	94	68.166	Acanthochromis_polyacanthus
ENSPVAG00000010736	APEX1	100	96.562	ENSAMEG00000005418	APEX1	100	96.562	Ailuropoda_melanoleuca
ENSPVAG00000010736	APEX1	87	70.863	ENSACIG00000010653	apex1	99	68.814	Amphilophus_citrinellus
ENSPVAG00000010736	APEX1	87	69.176	ENSAOCG00000009649	apex1	93	68.166	Amphiprion_ocellaris
ENSPVAG00000010736	APEX1	87	69.176	ENSAPEG00000021453	apex1	93	68.166	Amphiprion_percula
ENSPVAG00000010736	APEX1	86	71.533	ENSATEG00000002883	apex1	97	66.667	Anabas_testudineus
ENSPVAG00000010736	APEX1	100	68.125	ENSACAG00000008099	APEX1	100	70.988	Anolis_carolinensis
ENSPVAG00000010736	APEX1	100	95.312	ENSANAG00000030117	APEX1	100	95.312	Aotus_nancymaae
ENSPVAG00000010736	APEX1	86	71.273	ENSACLG00000018441	apex1	99	65.723	Astatotilapia_calliptera
ENSPVAG00000010736	APEX1	100	65.217	ENSAMXG00000034699	apex1	100	65.217	Astyanax_mexicanus
ENSPVAG00000010736	APEX1	100	94.688	ENSBTAG00000002745	APEX1	100	94.688	Bos_taurus
ENSPVAG00000010736	APEX1	79	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSPVAG00000010736	APEX1	100	95.938	ENSCJAG00000009726	APEX1	100	95.938	Callithrix_jacchus
ENSPVAG00000010736	APEX1	100	94.688	ENSCAFG00000032033	APEX1	100	94.688	Canis_familiaris
ENSPVAG00000010736	APEX1	54	91.379	ENSCAFG00020023002	-	96	91.379	Canis_lupus_dingo
ENSPVAG00000010736	APEX1	100	94.688	ENSCAFG00020014377	-	100	94.688	Canis_lupus_dingo
ENSPVAG00000010736	APEX1	100	94.062	ENSCHIG00000007298	-	100	94.062	Capra_hircus
ENSPVAG00000010736	APEX1	98	74.204	ENSCHIG00000014537	-	99	75.478	Capra_hircus
ENSPVAG00000010736	APEX1	100	94.375	ENSTSYG00000034813	APEX1	100	94.375	Carlito_syrichta
ENSPVAG00000010736	APEX1	84	88.192	ENSCAPG00000016235	APEX1	91	96.610	Cavia_aperea
ENSPVAG00000010736	APEX1	100	94.688	ENSCPOG00000030909	APEX1	100	94.688	Cavia_porcellus
ENSPVAG00000010736	APEX1	100	82.500	ENSCCAG00000031931	-	100	82.500	Cebus_capucinus
ENSPVAG00000010736	APEX1	100	95.938	ENSCCAG00000033056	-	100	95.938	Cebus_capucinus
ENSPVAG00000010736	APEX1	100	95.000	ENSCATG00000015580	APEX1	100	95.000	Cercocebus_atys
ENSPVAG00000010736	APEX1	100	95.000	ENSCLAG00000001002	APEX1	100	95.000	Chinchilla_lanigera
ENSPVAG00000010736	APEX1	100	94.688	ENSCSAG00000016685	-	100	94.688	Chlorocebus_sabaeus
ENSPVAG00000010736	APEX1	100	94.688	ENSCSAG00000016670	-	100	94.688	Chlorocebus_sabaeus
ENSPVAG00000010736	APEX1	100	70.717	ENSCPBG00000009567	APEX1	100	71.028	Chrysemys_picta_bellii
ENSPVAG00000010736	APEX1	91	54.181	ENSCING00000008137	-	95	54.181	Ciona_intestinalis
ENSPVAG00000010736	APEX1	83	52.075	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSPVAG00000010736	APEX1	100	95.000	ENSCANG00000030726	APEX1	100	95.000	Colobus_angolensis_palliatus
ENSPVAG00000010736	APEX1	100	91.562	ENSCGRG00001017046	Apex1	100	91.562	Cricetulus_griseus_chok1gshd
ENSPVAG00000010736	APEX1	100	91.562	ENSCGRG00000008984	Apex1	100	91.562	Cricetulus_griseus_crigri
ENSPVAG00000010736	APEX1	99	63.950	ENSCSEG00000017499	apex1	99	63.950	Cynoglossus_semilaevis
ENSPVAG00000010736	APEX1	87	71.326	ENSCVAG00000022075	apex1	96	67.893	Cyprinodon_variegatus
ENSPVAG00000010736	APEX1	100	65.625	ENSDARG00000045843	apex1	100	65.421	Danio_rerio
ENSPVAG00000010736	APEX1	100	90.625	ENSDNOG00000042234	APEX1	95	90.625	Dasypus_novemcinctus
ENSPVAG00000010736	APEX1	100	95.000	ENSDORG00000001616	Apex1	100	95.000	Dipodomys_ordii
ENSPVAG00000010736	APEX1	100	94.688	ENSETEG00000004855	-	100	94.688	Echinops_telfairi
ENSPVAG00000010736	APEX1	74	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSPVAG00000010736	APEX1	100	96.875	ENSEASG00005017489	APEX1	74	96.875	Equus_asinus_asinus
ENSPVAG00000010736	APEX1	100	96.875	ENSECAG00000022325	APEX1	82	96.875	Equus_caballus
ENSPVAG00000010736	APEX1	86	94.203	ENSEEUG00000012569	APEX1	100	93.103	Erinaceus_europaeus
ENSPVAG00000010736	APEX1	87	69.675	ENSELUG00000021706	apex1	100	65.839	Esox_lucius
ENSPVAG00000010736	APEX1	100	96.875	ENSFCAG00000030869	APEX1	100	96.875	Felis_catus
ENSPVAG00000010736	APEX1	100	94.375	ENSFDAG00000006120	APEX1	100	94.375	Fukomys_damarensis
ENSPVAG00000010736	APEX1	87	72.043	ENSFHEG00000009031	apex1	83	66.981	Fundulus_heteroclitus
ENSPVAG00000010736	APEX1	99	61.006	ENSGMOG00000007943	apex1	99	61.006	Gadus_morhua
ENSPVAG00000010736	APEX1	87	72.043	ENSGAFG00000005311	apex1	99	66.667	Gambusia_affinis
ENSPVAG00000010736	APEX1	87	69.176	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSPVAG00000010736	APEX1	100	70.405	ENSGAGG00000014999	APEX1	100	70.717	Gopherus_agassizii
ENSPVAG00000010736	APEX1	100	95.625	ENSGGOG00000002128	APEX1	100	95.625	Gorilla_gorilla
ENSPVAG00000010736	APEX1	86	70.909	ENSHBUG00000005894	apex1	99	65.723	Haplochromis_burtoni
ENSPVAG00000010736	APEX1	100	95.000	ENSHGLG00000002848	APEX1	100	95.000	Heterocephalus_glaber_female
ENSPVAG00000010736	APEX1	100	95.000	ENSHGLG00100017878	APEX1	100	95.000	Heterocephalus_glaber_male
ENSPVAG00000010736	APEX1	99	65.312	ENSHCOG00000009961	apex1	99	65.312	Hippocampus_comes
ENSPVAG00000010736	APEX1	100	67.290	ENSIPUG00000005799	apex1	100	67.290	Ictalurus_punctatus
ENSPVAG00000010736	APEX1	100	94.688	ENSSTOG00000010096	APEX1	100	94.688	Ictidomys_tridecemlineatus
ENSPVAG00000010736	APEX1	89	84.965	ENSJJAG00000020465	-	99	83.062	Jaculus_jaculus
ENSPVAG00000010736	APEX1	100	94.375	ENSJJAG00000012067	-	100	94.375	Jaculus_jaculus
ENSPVAG00000010736	APEX1	100	85.000	ENSJJAG00000003660	-	100	85.000	Jaculus_jaculus
ENSPVAG00000010736	APEX1	87	70.968	ENSKMAG00000021171	apex1	99	65.409	Kryptolebias_marmoratus
ENSPVAG00000010736	APEX1	87	68.100	ENSLBEG00000010248	apex1	99	63.175	Labrus_bergylta
ENSPVAG00000010736	APEX1	100	66.460	ENSLACG00000008617	APEX1	100	66.460	Latimeria_chalumnae
ENSPVAG00000010736	APEX1	100	66.358	ENSLOCG00000015516	apex1	99	66.358	Lepisosteus_oculatus
ENSPVAG00000010736	APEX1	100	94.062	ENSLAFG00000021872	APEX1	100	94.062	Loxodonta_africana
ENSPVAG00000010736	APEX1	100	95.000	ENSMFAG00000002565	APEX1	100	95.000	Macaca_fascicularis
ENSPVAG00000010736	APEX1	100	95.000	ENSMMUG00000048039	APEX1	100	95.000	Macaca_mulatta
ENSPVAG00000010736	APEX1	100	95.000	ENSMNEG00000036944	APEX1	100	95.000	Macaca_nemestrina
ENSPVAG00000010736	APEX1	100	95.000	ENSMLEG00000042125	APEX1	100	95.000	Mandrillus_leucophaeus
ENSPVAG00000010736	APEX1	87	70.968	ENSMAMG00000023526	apex1	99	66.144	Mastacembelus_armatus
ENSPVAG00000010736	APEX1	86	71.273	ENSMZEG00005014187	apex1	99	65.723	Maylandia_zebra
ENSPVAG00000010736	APEX1	100	91.875	ENSMAUG00000013994	Apex1	100	91.875	Mesocricetus_auratus
ENSPVAG00000010736	APEX1	100	95.625	ENSMICG00000043554	APEX1	100	95.625	Microcebus_murinus
ENSPVAG00000010736	APEX1	100	92.500	ENSMOCG00000013721	Apex1	100	92.500	Microtus_ochrogaster
ENSPVAG00000010736	APEX1	87	67.500	ENSMMOG00000010031	apex1	97	62.928	Mola_mola
ENSPVAG00000010736	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	84.568	Monodelphis_domestica
ENSPVAG00000010736	APEX1	87	63.799	ENSMALG00000011699	apex1	77	62.976	Monopterus_albus
ENSPVAG00000010736	APEX1	99	93.417	MGP_CAROLIEiJ_G0019209	Apex1	99	93.417	Mus_caroli
ENSPVAG00000010736	APEX1	100	94.062	ENSMUSG00000035960	Apex1	100	94.062	Mus_musculus
ENSPVAG00000010736	APEX1	100	91.250	MGP_PahariEiJ_G0030232	Apex1	100	94.062	Mus_pahari
ENSPVAG00000010736	APEX1	100	94.062	MGP_SPRETEiJ_G0020101	Apex1	100	94.062	Mus_spretus
ENSPVAG00000010736	APEX1	100	96.562	ENSMLUG00000028957	APEX1	100	96.562	Myotis_lucifugus
ENSPVAG00000010736	APEX1	100	93.438	ENSNGAG00000002725	-	100	93.438	Nannospalax_galili
ENSPVAG00000010736	APEX1	99	70.279	ENSNGAG00000021748	-	100	70.279	Nannospalax_galili
ENSPVAG00000010736	APEX1	86	70.909	ENSNBRG00000005334	apex1	91	65.409	Neolamprologus_brichardi
ENSPVAG00000010736	APEX1	100	95.312	ENSNLEG00000010839	APEX1	100	95.312	Nomascus_leucogenys
ENSPVAG00000010736	APEX1	100	86.250	ENSMEUG00000014519	APEX1	100	86.250	Notamacropus_eugenii
ENSPVAG00000010736	APEX1	100	93.438	ENSOPRG00000014029	APEX1	100	93.438	Ochotona_princeps
ENSPVAG00000010736	APEX1	97	75.563	ENSODEG00000004777	-	99	75.563	Octodon_degus
ENSPVAG00000010736	APEX1	100	72.086	ENSODEG00000006583	-	100	72.086	Octodon_degus
ENSPVAG00000010736	APEX1	100	95.312	ENSODEG00000001703	-	100	95.312	Octodon_degus
ENSPVAG00000010736	APEX1	87	71.223	ENSONIG00000012089	apex1	99	66.038	Oreochromis_niloticus
ENSPVAG00000010736	APEX1	89	83.509	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSPVAG00000010736	APEX1	100	94.375	ENSOCUG00000005022	APEX1	100	94.375	Oryctolagus_cuniculus
ENSPVAG00000010736	APEX1	87	71.223	ENSORLG00000012378	apex1	99	66.250	Oryzias_latipes
ENSPVAG00000010736	APEX1	87	71.223	ENSORLG00020021371	apex1	99	66.250	Oryzias_latipes_hni
ENSPVAG00000010736	APEX1	87	71.223	ENSORLG00015020089	apex1	99	66.250	Oryzias_latipes_hsok
ENSPVAG00000010736	APEX1	99	65.723	ENSOMEG00000018876	apex1	99	66.250	Oryzias_melastigma
ENSPVAG00000010736	APEX1	98	84.076	ENSOGAG00000029355	-	100	84.076	Otolemur_garnettii
ENSPVAG00000010736	APEX1	100	95.312	ENSOGAG00000013335	-	100	95.312	Otolemur_garnettii
ENSPVAG00000010736	APEX1	97	90.323	ENSOARG00000001876	-	100	90.323	Ovis_aries
ENSPVAG00000010736	APEX1	100	93.125	ENSOARG00000019740	-	100	93.125	Ovis_aries
ENSPVAG00000010736	APEX1	99	79.245	ENSOARG00000014424	-	100	79.245	Ovis_aries
ENSPVAG00000010736	APEX1	100	95.625	ENSPPAG00000038760	APEX1	100	95.625	Pan_paniscus
ENSPVAG00000010736	APEX1	100	96.562	ENSPPRG00000011794	APEX1	100	96.562	Panthera_pardus
ENSPVAG00000010736	APEX1	100	96.875	ENSPTIG00000014829	APEX1	100	96.875	Panthera_tigris_altaica
ENSPVAG00000010736	APEX1	100	95.625	ENSPTRG00000006093	APEX1	100	95.625	Pan_troglodytes
ENSPVAG00000010736	APEX1	100	95.000	ENSPANG00000022757	APEX1	100	95.000	Papio_anubis
ENSPVAG00000010736	APEX1	87	68.592	ENSPKIG00000003504	apex1	100	64.087	Paramormyrops_kingsleyae
ENSPVAG00000010736	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSPVAG00000010736	APEX1	100	94.688	ENSPEMG00000019097	Apex1	100	94.688	Peromyscus_maniculatus_bairdii
ENSPVAG00000010736	APEX1	94	66.556	ENSPMAG00000007275	-	99	66.556	Petromyzon_marinus
ENSPVAG00000010736	APEX1	100	83.438	ENSPCIG00000023274	APEX1	100	85.759	Phascolarctos_cinereus
ENSPVAG00000010736	APEX1	87	72.401	ENSPFOG00000004178	apex1	99	66.667	Poecilia_formosa
ENSPVAG00000010736	APEX1	87	72.043	ENSPLAG00000012779	apex1	99	66.981	Poecilia_latipinna
ENSPVAG00000010736	APEX1	87	72.401	ENSPMEG00000019623	apex1	99	66.667	Poecilia_mexicana
ENSPVAG00000010736	APEX1	87	71.685	ENSPREG00000014298	apex1	99	66.038	Poecilia_reticulata
ENSPVAG00000010736	APEX1	100	95.938	ENSPPYG00000005565	APEX1	100	95.938	Pongo_abelii
ENSPVAG00000010736	APEX1	100	92.188	ENSPCAG00000010376	APEX1	100	92.188	Procavia_capensis
ENSPVAG00000010736	APEX1	100	95.625	ENSPCOG00000021564	APEX1	100	95.625	Propithecus_coquereli
ENSPVAG00000010736	APEX1	86	71.273	ENSPNYG00000023940	apex1	99	65.723	Pundamilia_nyererei
ENSPVAG00000010736	APEX1	93	65.101	ENSPNAG00000020897	apex1	96	64.983	Pygocentrus_nattereri
ENSPVAG00000010736	APEX1	100	93.125	ENSRNOG00000009663	Apex1	100	93.125	Rattus_norvegicus
ENSPVAG00000010736	APEX1	100	95.000	ENSRBIG00000038325	APEX1	99	95.000	Rhinopithecus_bieti
ENSPVAG00000010736	APEX1	100	95.625	ENSSBOG00000018921	-	100	95.625	Saimiri_boliviensis_boliviensis
ENSPVAG00000010736	APEX1	100	80.625	ENSSBOG00000031372	-	100	80.625	Saimiri_boliviensis_boliviensis
ENSPVAG00000010736	APEX1	100	82.716	ENSSHAG00000013524	APEX1	100	83.537	Sarcophilus_harrisii
ENSPVAG00000010736	APEX1	87	66.426	ENSSFOG00015001948	apex1	100	61.875	Scleropages_formosus
ENSPVAG00000010736	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	64.151	Scophthalmus_maximus
ENSPVAG00000010736	APEX1	87	69.176	ENSSDUG00000016377	apex1	99	63.836	Seriola_dumerili
ENSPVAG00000010736	APEX1	87	69.892	ENSSLDG00000023005	apex1	99	64.465	Seriola_lalandi_dorsalis
ENSPVAG00000010736	APEX1	89	72.982	ENSSPUG00000000531	APEX1	95	72.982	Sphenodon_punctatus
ENSPVAG00000010736	APEX1	87	69.892	ENSSPAG00000000458	apex1	94	68.512	Stegastes_partitus
ENSPVAG00000010736	APEX1	100	95.000	ENSSSCG00000040060	-	100	95.000	Sus_scrofa
ENSPVAG00000010736	APEX1	100	54.908	ENSSSCG00000039705	-	100	54.908	Sus_scrofa
ENSPVAG00000010736	APEX1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSPVAG00000010736	APEX1	87	67.266	ENSTRUG00000004268	apex1	87	66.319	Takifugu_rubripes
ENSPVAG00000010736	APEX1	99	62.579	ENSTNIG00000005778	apex1	99	62.579	Tetraodon_nigroviridis
ENSPVAG00000010736	APEX1	100	91.875	ENSTBEG00000006405	APEX1	100	91.875	Tupaia_belangeri
ENSPVAG00000010736	APEX1	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSPVAG00000010736	APEX1	100	96.250	ENSUAMG00000010457	APEX1	100	96.250	Ursus_americanus
ENSPVAG00000010736	APEX1	100	96.250	ENSUMAG00000009178	APEX1	100	96.250	Ursus_maritimus
ENSPVAG00000010736	APEX1	74	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSPVAG00000010736	APEX1	100	94.062	ENSVVUG00000009010	APEX1	100	94.062	Vulpes_vulpes
ENSPVAG00000010736	APEX1	100	65.635	ENSXETG00000024773	apex1	100	65.635	Xenopus_tropicalis
ENSPVAG00000010736	APEX1	87	72.043	ENSXCOG00000015233	apex1	99	66.667	Xiphophorus_couchianus
ENSPVAG00000010736	APEX1	87	72.043	ENSXMAG00000006195	apex1	99	66.667	Xiphophorus_maculatus