EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000010935 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 26313 bases
Position: chrGeneScaffold_2037:585959-612271
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000010306	PPR	PF01535.20	6.2e-06	1	1
ENSPVAP00000010306	MRP-S27	PF10037.9	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000010935	PTCD2-201	1164	-	ENSPVAP00000010306	387 (aa)	-	UPI00018B4DB1

Gene Model

Click here to download ENSPVAG00000010935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000010935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000010935	PTCD2	99	76.943	ENSG00000049883	PTCD2	99	76.943	Homo_sapiens
ENSPVAG00000010935	PTCD2	90	47.429	ENSAPOG00000020682	ptcd2	92	47.429	Acanthochromis_polyacanthus
ENSPVAG00000010935	PTCD2	99	79.845	ENSAMEG00000007194	PTCD2	99	79.845	Ailuropoda_melanoleuca
ENSPVAG00000010935	PTCD2	89	42.241	ENSACIG00000002053	ptcd2	100	42.241	Amphilophus_citrinellus
ENSPVAG00000010935	PTCD2	90	47.143	ENSAOCG00000006616	ptcd2	90	47.143	Amphiprion_ocellaris
ENSPVAG00000010935	PTCD2	90	47.429	ENSAPEG00000022926	ptcd2	90	47.429	Amphiprion_percula
ENSPVAG00000010935	PTCD2	93	55.125	ENSACAG00000009747	PTCD2	92	55.125	Anolis_carolinensis
ENSPVAG00000010935	PTCD2	99	77.979	ENSANAG00000029353	PTCD2	99	77.979	Aotus_nancymaae
ENSPVAG00000010935	PTCD2	90	45.115	ENSACLG00000027742	ptcd2	89	45.115	Astatotilapia_calliptera
ENSPVAG00000010935	PTCD2	88	42.059	ENSAMXG00000029404	ptcd2	89	42.059	Astyanax_mexicanus
ENSPVAG00000010935	PTCD2	99	81.510	ENSBTAG00000014675	PTCD2	100	81.510	Bos_taurus
ENSPVAG00000010935	PTCD2	99	78.238	ENSCJAG00000016364	PTCD2	99	78.238	Callithrix_jacchus
ENSPVAG00000010935	PTCD2	99	76.623	ENSCAFG00000007982	PTCD2	90	76.623	Canis_familiaris
ENSPVAG00000010935	PTCD2	89	79.480	ENSCAFG00020019147	PTCD2	97	79.480	Canis_lupus_dingo
ENSPVAG00000010935	PTCD2	99	82.292	ENSCHIG00000017118	PTCD2	100	82.292	Capra_hircus
ENSPVAG00000010935	PTCD2	99	71.018	ENSCPOG00000040168	PTCD2	100	71.018	Cavia_porcellus
ENSPVAG00000010935	PTCD2	99	76.943	ENSCCAG00000029389	-	99	76.943	Cebus_capucinus
ENSPVAG00000010935	PTCD2	80	76.603	ENSCCAG00000021996	-	95	77.273	Cebus_capucinus
ENSPVAG00000010935	PTCD2	99	75.457	ENSCATG00000019069	PTCD2	100	75.457	Cercocebus_atys
ENSPVAG00000010935	PTCD2	99	70.496	ENSCLAG00000000072	PTCD2	100	70.496	Chinchilla_lanigera
ENSPVAG00000010935	PTCD2	99	75.718	ENSCSAG00000015623	PTCD2	100	75.718	Chlorocebus_sabaeus
ENSPVAG00000010935	PTCD2	89	55.460	ENSCHOG00000010634	PTCD2	100	55.460	Choloepus_hoffmanni
ENSPVAG00000010935	PTCD2	93	54.696	ENSCPBG00000000216	PTCD2	92	54.696	Chrysemys_picta_bellii
ENSPVAG00000010935	PTCD2	99	76.166	ENSCANG00000035636	PTCD2	99	76.166	Colobus_angolensis_palliatus
ENSPVAG00000010935	PTCD2	100	68.814	ENSCGRG00001015289	Ptcd2	85	68.814	Cricetulus_griseus_chok1gshd
ENSPVAG00000010935	PTCD2	100	68.814	ENSCGRG00000006193	Ptcd2	85	68.814	Cricetulus_griseus_crigri
ENSPVAG00000010935	PTCD2	90	44.828	ENSCVAG00000001285	ptcd2	89	44.828	Cyprinodon_variegatus
ENSPVAG00000010935	PTCD2	96	44.118	ENSDARG00000035391	ptcd2	97	44.118	Danio_rerio
ENSPVAG00000010935	PTCD2	99	73.368	ENSDNOG00000008719	PTCD2	100	73.368	Dasypus_novemcinctus
ENSPVAG00000010935	PTCD2	99	74.677	ENSDORG00000004921	Ptcd2	100	74.677	Dipodomys_ordii
ENSPVAG00000010935	PTCD2	100	67.352	ENSETEG00000016542	PTCD2	100	67.352	Echinops_telfairi
ENSPVAG00000010935	PTCD2	99	79.896	ENSEASG00005018038	PTCD2	100	79.896	Equus_asinus_asinus
ENSPVAG00000010935	PTCD2	99	79.481	ENSECAG00000007022	PTCD2	99	79.481	Equus_caballus
ENSPVAG00000010935	PTCD2	99	72.135	ENSEEUG00000014031	PTCD2	99	72.135	Erinaceus_europaeus
ENSPVAG00000010935	PTCD2	91	48.725	ENSELUG00000003584	ptcd2	91	48.725	Esox_lucius
ENSPVAG00000010935	PTCD2	100	73.385	ENSFCAG00000045432	PTCD2	84	73.385	Felis_catus
ENSPVAG00000010935	PTCD2	84	49.541	ENSFALG00000010299	PTCD2	99	49.541	Ficedula_albicollis
ENSPVAG00000010935	PTCD2	99	72.846	ENSFDAG00000018461	PTCD2	100	72.846	Fukomys_damarensis
ENSPVAG00000010935	PTCD2	90	49.573	ENSGMOG00000003637	ptcd2	91	49.573	Gadus_morhua
ENSPVAG00000010935	PTCD2	92	48.459	ENSGALG00000038260	PTCD2	100	47.135	Gallus_gallus
ENSPVAG00000010935	PTCD2	99	54.082	ENSGAGG00000021952	PTCD2	99	54.082	Gopherus_agassizii
ENSPVAG00000010935	PTCD2	99	76.943	ENSGGOG00000010695	PTCD2	99	76.943	Gorilla_gorilla
ENSPVAG00000010935	PTCD2	90	45.115	ENSHBUG00000009191	ptcd2	89	45.115	Haplochromis_burtoni
ENSPVAG00000010935	PTCD2	99	72.585	ENSHGLG00000001234	PTCD2	100	72.585	Heterocephalus_glaber_female
ENSPVAG00000010935	PTCD2	99	72.846	ENSHGLG00100015419	PTCD2	100	72.846	Heterocephalus_glaber_male
ENSPVAG00000010935	PTCD2	90	46.724	ENSHCOG00000001703	ptcd2	91	46.724	Hippocampus_comes
ENSPVAG00000010935	PTCD2	86	44.311	ENSIPUG00000006080	ptcd2	93	43.889	Ictalurus_punctatus
ENSPVAG00000010935	PTCD2	98	77.487	ENSSTOG00000006596	PTCD2	99	77.487	Ictidomys_tridecemlineatus
ENSPVAG00000010935	PTCD2	99	74.935	ENSJJAG00000024388	Ptcd2	100	74.935	Jaculus_jaculus
ENSPVAG00000010935	PTCD2	93	42.896	ENSKMAG00000009329	ptcd2	94	42.896	Kryptolebias_marmoratus
ENSPVAG00000010935	PTCD2	93	44.199	ENSLBEG00000024871	ptcd2	91	44.199	Labrus_bergylta
ENSPVAG00000010935	PTCD2	99	52.442	ENSLOCG00000011122	ptcd2	99	52.442	Lepisosteus_oculatus
ENSPVAG00000010935	PTCD2	80	82.848	ENSLAFG00000004115	PTCD2	99	82.848	Loxodonta_africana
ENSPVAG00000010935	PTCD2	99	75.648	ENSMFAG00000031516	PTCD2	99	75.648	Macaca_fascicularis
ENSPVAG00000010935	PTCD2	99	75.196	ENSMNEG00000007537	PTCD2	100	75.196	Macaca_nemestrina
ENSPVAG00000010935	PTCD2	99	75.389	ENSMLEG00000031093	PTCD2	99	75.389	Mandrillus_leucophaeus
ENSPVAG00000010935	PTCD2	90	49.003	ENSMAMG00000018529	ptcd2	92	49.003	Mastacembelus_armatus
ENSPVAG00000010935	PTCD2	90	45.115	ENSMZEG00005003625	ptcd2	89	45.115	Maylandia_zebra
ENSPVAG00000010935	PTCD2	90	49.138	ENSMGAG00000005033	PTCD2	100	49.138	Meleagris_gallopavo
ENSPVAG00000010935	PTCD2	99	54.830	ENSMAUG00000020253	Ptcd2	100	54.830	Mesocricetus_auratus
ENSPVAG00000010935	PTCD2	99	78.385	ENSMICG00000004535	PTCD2	99	78.385	Microcebus_murinus
ENSPVAG00000010935	PTCD2	99	70.757	ENSMOCG00000019985	Ptcd2	100	70.757	Microtus_ochrogaster
ENSPVAG00000010935	PTCD2	99	55.208	ENSMODG00000001695	PTCD2	100	55.208	Monodelphis_domestica
ENSPVAG00000010935	PTCD2	90	47.414	ENSMALG00000022372	ptcd2	91	47.414	Monopterus_albus
ENSPVAG00000010935	PTCD2	99	67.624	MGP_CAROLIEiJ_G0018829	Ptcd2	100	67.624	Mus_caroli
ENSPVAG00000010935	PTCD2	99	66.841	ENSMUSG00000021650	Ptcd2	100	66.841	Mus_musculus
ENSPVAG00000010935	PTCD2	99	70.496	MGP_PahariEiJ_G0015904	Ptcd2	100	70.496	Mus_pahari
ENSPVAG00000010935	PTCD2	99	67.363	MGP_SPRETEiJ_G0019711	Ptcd2	100	67.363	Mus_spretus
ENSPVAG00000010935	PTCD2	99	80.418	ENSMPUG00000014401	PTCD2	100	80.418	Mustela_putorius_furo
ENSPVAG00000010935	PTCD2	100	80.670	ENSMLUG00000007374	PTCD2	100	80.670	Myotis_lucifugus
ENSPVAG00000010935	PTCD2	99	71.279	ENSNGAG00000005027	Ptcd2	100	71.279	Nannospalax_galili
ENSPVAG00000010935	PTCD2	90	45.402	ENSNBRG00000008174	ptcd2	91	45.402	Neolamprologus_brichardi
ENSPVAG00000010935	PTCD2	85	45.289	ENSNBRG00000000092	-	99	45.289	Neolamprologus_brichardi
ENSPVAG00000010935	PTCD2	99	76.425	ENSNLEG00000004516	PTCD2	99	76.425	Nomascus_leucogenys
ENSPVAG00000010935	PTCD2	56	76.687	ENSMEUG00000014012	-	60	73.295	Notamacropus_eugenii
ENSPVAG00000010935	PTCD2	99	69.509	ENSOPRG00000007290	PTCD2	99	69.509	Ochotona_princeps
ENSPVAG00000010935	PTCD2	99	72.063	ENSODEG00000016417	PTCD2	100	72.063	Octodon_degus
ENSPVAG00000010935	PTCD2	71	50.000	ENSONIG00000011269	ptcd2	80	50.000	Oreochromis_niloticus
ENSPVAG00000010935	PTCD2	94	76.374	ENSOCUG00000007970	PTCD2	100	74.935	Oryctolagus_cuniculus
ENSPVAG00000010935	PTCD2	89	45.954	ENSORLG00000003851	ptcd2	88	45.954	Oryzias_latipes
ENSPVAG00000010935	PTCD2	89	45.665	ENSORLG00020009823	ptcd2	90	45.665	Oryzias_latipes_hni
ENSPVAG00000010935	PTCD2	89	44.928	ENSORLG00015016777	ptcd2	99	44.928	Oryzias_latipes_hsok
ENSPVAG00000010935	PTCD2	89	44.798	ENSOMEG00000012396	ptcd2	84	44.798	Oryzias_melastigma
ENSPVAG00000010935	PTCD2	99	74.352	ENSOGAG00000008390	PTCD2	99	74.352	Otolemur_garnettii
ENSPVAG00000010935	PTCD2	100	82.519	ENSOARG00000005087	PTCD2	100	82.519	Ovis_aries
ENSPVAG00000010935	PTCD2	99	76.943	ENSPPAG00000028480	PTCD2	99	76.943	Pan_paniscus
ENSPVAG00000010935	PTCD2	99	76.425	ENSPTRG00000016968	PTCD2	99	76.425	Pan_troglodytes
ENSPVAG00000010935	PTCD2	89	77.391	ENSPANG00000006611	PTCD2	89	77.391	Papio_anubis
ENSPVAG00000010935	PTCD2	91	47.042	ENSPKIG00000019896	ptcd2	92	47.042	Paramormyrops_kingsleyae
ENSPVAG00000010935	PTCD2	82	57.053	ENSPSIG00000014559	PTCD2	98	57.053	Pelodiscus_sinensis
ENSPVAG00000010935	PTCD2	99	71.169	ENSPEMG00000000884	Ptcd2	100	71.169	Peromyscus_maniculatus_bairdii
ENSPVAG00000010935	PTCD2	99	56.771	ENSPCIG00000029047	PTCD2	100	56.771	Phascolarctos_cinereus
ENSPVAG00000010935	PTCD2	90	45.115	ENSPLAG00000010456	ptcd2	91	45.115	Poecilia_latipinna
ENSPVAG00000010935	PTCD2	90	45.299	ENSPREG00000021797	ptcd2	89	45.299	Poecilia_reticulata
ENSPVAG00000010935	PTCD2	99	66.839	ENSPPYG00000015543	PTCD2	99	66.839	Pongo_abelii
ENSPVAG00000010935	PTCD2	81	66.561	ENSPCAG00000006806	PTCD2	100	66.561	Procavia_capensis
ENSPVAG00000010935	PTCD2	90	45.115	ENSPNYG00000003122	ptcd2	89	45.115	Pundamilia_nyererei
ENSPVAG00000010935	PTCD2	96	46.277	ENSPNAG00000021490	ptcd2	97	46.277	Pygocentrus_nattereri
ENSPVAG00000010935	PTCD2	99	70.757	ENSRNOG00000028403	Ptcd2	100	70.757	Rattus_norvegicus
ENSPVAG00000010935	PTCD2	99	70.207	ENSRBIG00000032929	PTCD2	99	70.207	Rhinopithecus_bieti
ENSPVAG00000010935	PTCD2	99	75.979	ENSRROG00000000080	PTCD2	100	75.979	Rhinopithecus_roxellana
ENSPVAG00000010935	PTCD2	99	76.240	ENSSBOG00000018911	PTCD2	100	76.240	Saimiri_boliviensis_boliviensis
ENSPVAG00000010935	PTCD2	99	58.594	ENSSHAG00000003833	PTCD2	99	58.594	Sarcophilus_harrisii
ENSPVAG00000010935	PTCD2	87	46.866	ENSSFOG00015015415	ptcd2	87	46.866	Scleropages_formosus
ENSPVAG00000010935	PTCD2	89	43.516	ENSSMAG00000010350	ptcd2	90	43.516	Scophthalmus_maximus
ENSPVAG00000010935	PTCD2	89	48.415	ENSSDUG00000008142	ptcd2	87	48.415	Seriola_dumerili
ENSPVAG00000010935	PTCD2	89	48.703	ENSSLDG00000015284	ptcd2	91	48.703	Seriola_lalandi_dorsalis
ENSPVAG00000010935	PTCD2	81	71.246	ENSSARG00000004983	PTCD2	100	71.246	Sorex_araneus
ENSPVAG00000010935	PTCD2	97	50.794	ENSSPUG00000000176	PTCD2	94	50.794	Sphenodon_punctatus
ENSPVAG00000010935	PTCD2	90	45.714	ENSSPAG00000008591	ptcd2	90	45.714	Stegastes_partitus
ENSPVAG00000010935	PTCD2	100	83.763	ENSSSCG00000016975	PTCD2	91	83.763	Sus_scrofa
ENSPVAG00000010935	PTCD2	89	48.844	ENSTGUG00000005705	PTCD2	99	48.844	Taeniopygia_guttata
ENSPVAG00000010935	PTCD2	99	74.677	ENSTBEG00000016559	PTCD2	99	74.677	Tupaia_belangeri
ENSPVAG00000010935	PTCD2	99	83.763	ENSTTRG00000011851	PTCD2	99	83.763	Tursiops_truncatus
ENSPVAG00000010935	PTCD2	99	79.328	ENSUAMG00000007583	PTCD2	91	79.328	Ursus_americanus
ENSPVAG00000010935	PTCD2	99	79.373	ENSUMAG00000007666	PTCD2	100	79.373	Ursus_maritimus
ENSPVAG00000010935	PTCD2	100	83.290	ENSVPAG00000009597	PTCD2	100	83.290	Vicugna_pacos
ENSPVAG00000010935	PTCD2	99	76.501	ENSVVUG00000007299	-	100	76.501	Vulpes_vulpes
ENSPVAG00000010935	PTCD2	93	49.861	ENSXETG00000031652	PTCD2	94	49.861	Xenopus_tropicalis
ENSPVAG00000010935	PTCD2	84	44.648	ENSXMAG00000005940	ptcd2	82	44.253	Xiphophorus_maculatus