EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000011107 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 5922 bases
Position: chrGeneScaffold_2414:89554-95475
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000010471	PseudoU_synth_2	PF00849.22	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000011107	RPUSD3-201	1059	-	ENSPVAP00000010471	352 (aa)	-	UPI00018B2861

Gene Model

Click here to download ENSPVAG00000011107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000011107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000011107	RPUSD3	78	34.146	ENSPVAG00000000988	RPUSD4	72	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000011107	RPUSD3	100	80.114	ENSG00000156990	RPUSD3	100	80.114	Homo_sapiens
ENSPVAG00000011107	RPUSD3	100	80.398	ENSAMEG00000016227	RPUSD3	100	80.398	Ailuropoda_melanoleuca
ENSPVAG00000011107	RPUSD3	94	49.112	ENSACAG00000009836	RPUSD3	93	49.112	Anolis_carolinensis
ENSPVAG00000011107	RPUSD3	78	55.137	ENSANAG00000007127	-	98	55.137	Aotus_nancymaae
ENSPVAG00000011107	RPUSD3	53	80.851	ENSANAG00000038118	-	90	80.851	Aotus_nancymaae
ENSPVAG00000011107	RPUSD3	56	83.333	ENSANAG00000019945	-	79	83.333	Aotus_nancymaae
ENSPVAG00000011107	RPUSD3	98	79.942	ENSBTAG00000007968	RPUSD3	100	79.942	Bos_taurus
ENSPVAG00000011107	RPUSD3	100	78.693	ENSCAFG00000029733	RPUSD3	100	78.693	Canis_familiaris
ENSPVAG00000011107	RPUSD3	100	78.693	ENSCAFG00020008582	RPUSD3	100	78.693	Canis_lupus_dingo
ENSPVAG00000011107	RPUSD3	98	78.198	ENSCHIG00000026027	RPUSD3	100	78.198	Capra_hircus
ENSPVAG00000011107	RPUSD3	99	72.650	ENSTSYG00000009994	RPUSD3	100	72.650	Carlito_syrichta
ENSPVAG00000011107	RPUSD3	75	78.327	ENSCAPG00000017559	RPUSD3	99	78.327	Cavia_aperea
ENSPVAG00000011107	RPUSD3	99	65.330	ENSCPOG00000037956	RPUSD3	92	65.330	Cavia_porcellus
ENSPVAG00000011107	RPUSD3	100	78.754	ENSCCAG00000029530	RPUSD3	100	78.754	Cebus_capucinus
ENSPVAG00000011107	RPUSD3	100	79.545	ENSCATG00000036939	RPUSD3	100	79.545	Cercocebus_atys
ENSPVAG00000011107	RPUSD3	100	79.261	ENSCSAG00000010506	RPUSD3	100	79.261	Chlorocebus_sabaeus
ENSPVAG00000011107	RPUSD3	50	87.500	ENSCHOG00000010151	-	67	87.500	Choloepus_hoffmanni
ENSPVAG00000011107	RPUSD3	73	54.475	ENSCPBG00000008825	RPUSD3	95	54.475	Chrysemys_picta_bellii
ENSPVAG00000011107	RPUSD3	100	79.830	ENSCANG00000040711	RPUSD3	100	79.830	Colobus_angolensis_palliatus
ENSPVAG00000011107	RPUSD3	98	72.543	ENSCGRG00001004923	Rpusd3	96	72.543	Cricetulus_griseus_chok1gshd
ENSPVAG00000011107	RPUSD3	97	72.727	ENSCGRG00000018315	Rpusd3	99	72.727	Cricetulus_griseus_crigri
ENSPVAG00000011107	RPUSD3	99	77.208	ENSDNOG00000039160	RPUSD3	93	77.208	Dasypus_novemcinctus
ENSPVAG00000011107	RPUSD3	74	75.000	ENSDORG00000026827	Rpusd3	92	75.000	Dipodomys_ordii
ENSPVAG00000011107	RPUSD3	100	72.159	ENSETEG00000006538	RPUSD3	99	72.159	Echinops_telfairi
ENSPVAG00000011107	RPUSD3	58	38.350	ENSEBUG00000015605	RPUSD3	67	38.350	Eptatretus_burgeri
ENSPVAG00000011107	RPUSD3	100	79.545	ENSEASG00005014160	RPUSD3	98	79.545	Equus_asinus_asinus
ENSPVAG00000011107	RPUSD3	100	79.830	ENSECAG00000019988	RPUSD3	98	79.830	Equus_caballus
ENSPVAG00000011107	RPUSD3	96	58.309	ENSEEUG00000007353	RPUSD3	97	58.140	Erinaceus_europaeus
ENSPVAG00000011107	RPUSD3	100	80.398	ENSFCAG00000014199	RPUSD3	100	80.398	Felis_catus
ENSPVAG00000011107	RPUSD3	77	49.451	ENSFALG00000012968	RPUSD3	99	49.451	Ficedula_albicollis
ENSPVAG00000011107	RPUSD3	75	80.682	ENSFDAG00000008350	RPUSD3	81	80.682	Fukomys_damarensis
ENSPVAG00000011107	RPUSD3	74	54.753	ENSGAGG00000007493	RPUSD3	82	54.753	Gopherus_agassizii
ENSPVAG00000011107	RPUSD3	100	79.830	ENSGGOG00000013120	RPUSD3	100	79.830	Gorilla_gorilla
ENSPVAG00000011107	RPUSD3	84	76.949	ENSHGLG00000011722	RPUSD3	74	76.949	Heterocephalus_glaber_female
ENSPVAG00000011107	RPUSD3	84	76.949	ENSHGLG00100016038	RPUSD3	74	76.949	Heterocephalus_glaber_male
ENSPVAG00000011107	RPUSD3	100	75.852	ENSSTOG00000002125	RPUSD3	100	75.852	Ictidomys_tridecemlineatus
ENSPVAG00000011107	RPUSD3	98	69.477	ENSJJAG00000012679	Rpusd3	100	69.477	Jaculus_jaculus
ENSPVAG00000011107	RPUSD3	98	81.105	ENSLAFG00000017501	RPUSD3	100	81.105	Loxodonta_africana
ENSPVAG00000011107	RPUSD3	100	79.261	ENSMFAG00000032407	RPUSD3	100	79.261	Macaca_fascicularis
ENSPVAG00000011107	RPUSD3	100	75.284	ENSMMUG00000010628	RPUSD3	97	84.295	Macaca_mulatta
ENSPVAG00000011107	RPUSD3	100	79.545	ENSMNEG00000040308	RPUSD3	100	79.545	Macaca_nemestrina
ENSPVAG00000011107	RPUSD3	100	79.545	ENSMLEG00000033940	RPUSD3	95	84.653	Mandrillus_leucophaeus
ENSPVAG00000011107	RPUSD3	98	72.384	ENSMAUG00000015473	Rpusd3	100	72.384	Mesocricetus_auratus
ENSPVAG00000011107	RPUSD3	98	76.744	ENSMICG00000002315	RPUSD3	100	76.744	Microcebus_murinus
ENSPVAG00000011107	RPUSD3	98	70.640	ENSMOCG00000022613	Rpusd3	100	70.640	Microtus_ochrogaster
ENSPVAG00000011107	RPUSD3	96	54.971	ENSMODG00000005210	RPUSD3	89	54.678	Monodelphis_domestica
ENSPVAG00000011107	RPUSD3	98	71.802	MGP_CAROLIEiJ_G0028725	Rpusd3	100	71.802	Mus_caroli
ENSPVAG00000011107	RPUSD3	98	72.384	ENSMUSG00000051169	Rpusd3	100	72.384	Mus_musculus
ENSPVAG00000011107	RPUSD3	98	72.674	MGP_PahariEiJ_G0022476	Rpusd3	100	72.674	Mus_pahari
ENSPVAG00000011107	RPUSD3	98	71.802	MGP_SPRETEiJ_G0029753	Rpusd3	100	71.802	Mus_spretus
ENSPVAG00000011107	RPUSD3	100	76.420	ENSMPUG00000017132	RPUSD3	100	76.420	Mustela_putorius_furo
ENSPVAG00000011107	RPUSD3	98	82.081	ENSMLUG00000006135	RPUSD3	99	82.081	Myotis_lucifugus
ENSPVAG00000011107	RPUSD3	95	74.474	ENSNGAG00000023704	Rpusd3	97	74.474	Nannospalax_galili
ENSPVAG00000011107	RPUSD3	100	66.477	ENSNLEG00000004214	RPUSD3	95	83.663	Nomascus_leucogenys
ENSPVAG00000011107	RPUSD3	74	63.602	ENSMEUG00000013098	-	100	63.602	Notamacropus_eugenii
ENSPVAG00000011107	RPUSD3	99	60.345	ENSOPRG00000002300	RPUSD3	99	60.345	Ochotona_princeps
ENSPVAG00000011107	RPUSD3	75	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSPVAG00000011107	RPUSD3	81	49.474	ENSOANG00000012081	-	99	48.432	Ornithorhynchus_anatinus
ENSPVAG00000011107	RPUSD3	98	65.057	ENSOCUG00000027885	RPUSD3	100	65.057	Oryctolagus_cuniculus
ENSPVAG00000011107	RPUSD3	89	80.892	ENSOGAG00000012592	RPUSD3	100	80.892	Otolemur_garnettii
ENSPVAG00000011107	RPUSD3	99	78.917	ENSOARG00000005928	RPUSD3	99	78.917	Ovis_aries
ENSPVAG00000011107	RPUSD3	99	80.229	ENSPPAG00000038083	RPUSD3	99	80.229	Pan_paniscus
ENSPVAG00000011107	RPUSD3	100	79.545	ENSPPRG00000024433	RPUSD3	100	79.545	Panthera_pardus
ENSPVAG00000011107	RPUSD3	98	80.814	ENSPTIG00000006828	RPUSD3	100	80.814	Panthera_tigris_altaica
ENSPVAG00000011107	RPUSD3	99	79.943	ENSPTRG00000051760	RPUSD3	99	79.943	Pan_troglodytes
ENSPVAG00000011107	RPUSD3	100	79.545	ENSPANG00000023885	RPUSD3	95	84.653	Papio_anubis
ENSPVAG00000011107	RPUSD3	98	71.512	ENSPEMG00000017245	Rpusd3	100	71.512	Peromyscus_maniculatus_bairdii
ENSPVAG00000011107	RPUSD3	89	57.944	ENSPCIG00000021901	RPUSD3	94	57.895	Phascolarctos_cinereus
ENSPVAG00000011107	RPUSD3	99	80.516	ENSPPYG00000013676	RPUSD3	99	80.516	Pongo_abelii
ENSPVAG00000011107	RPUSD3	82	61.592	ENSPCAG00000013731	-	100	61.592	Procavia_capensis
ENSPVAG00000011107	RPUSD3	100	79.830	ENSPCOG00000018314	RPUSD3	100	79.830	Propithecus_coquereli
ENSPVAG00000011107	RPUSD3	98	66.570	ENSRNOG00000009084	Rpusd3	100	66.570	Rattus_norvegicus
ENSPVAG00000011107	RPUSD3	99	79.943	ENSRBIG00000041230	RPUSD3	95	84.653	Rhinopithecus_bieti
ENSPVAG00000011107	RPUSD3	99	80.229	ENSRROG00000043328	RPUSD3	95	84.653	Rhinopithecus_roxellana
ENSPVAG00000011107	RPUSD3	100	78.470	ENSSBOG00000036106	RPUSD3	100	78.470	Saimiri_boliviensis_boliviensis
ENSPVAG00000011107	RPUSD3	88	58.576	ENSSHAG00000015536	RPUSD3	99	58.521	Sarcophilus_harrisii
ENSPVAG00000011107	RPUSD3	100	78.125	ENSSSCG00000011555	RPUSD3	100	78.125	Sus_scrofa
ENSPVAG00000011107	RPUSD3	62	49.770	ENSTGUG00000008744	RPUSD3	94	49.541	Taeniopygia_guttata
ENSPVAG00000011107	RPUSD3	82	77.163	ENSTBEG00000000176	RPUSD3	100	77.163	Tupaia_belangeri
ENSPVAG00000011107	RPUSD3	100	80.966	ENSTTRG00000007544	RPUSD3	100	80.966	Tursiops_truncatus
ENSPVAG00000011107	RPUSD3	89	82.803	ENSUAMG00000011354	RPUSD3	98	82.803	Ursus_americanus
ENSPVAG00000011107	RPUSD3	100	80.114	ENSUMAG00000018830	RPUSD3	100	80.114	Ursus_maritimus
ENSPVAG00000011107	RPUSD3	98	79.942	ENSVVUG00000023735	RPUSD3	100	79.942	Vulpes_vulpes
ENSPVAG00000011107	RPUSD3	79	49.466	ENSXETG00000023546	rpusd3	99	49.466	Xenopus_tropicalis