EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000011929 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 7391 bases
Position: chrscaffold_1407:206481-213871
Accession: 105297419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011243	PRP38	PF03371.15	9.7e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000011929	-	1647	-	ENSPVAP00000011243	548 (aa)	XP_011366393	UPI00018B319C

Gene Model

Click here to download ENSPVAG00000011929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000011929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000011929	-	100	97.445	ENSG00000134186	PRPF38B	100	97.445	Homo_sapiens
ENSPVAG00000011929	-	100	96.715	ENSANAG00000028333	PRPF38B	100	96.875	Aotus_nancymaae
ENSPVAG00000011929	-	100	91.985	ENSCGRG00001018841	Prpf38b	100	90.893	Cricetulus_griseus_chok1gshd
ENSPVAG00000011929	-	83	92.731	ENSCGRG00000002972	Prpf38b	100	90.308	Cricetulus_griseus_crigri
ENSPVAG00000011929	-	79	94.253	ENSDORG00000025236	-	97	94.062	Dipodomys_ordii
ENSPVAG00000011929	-	100	93.796	ENSEEUG00000014328	PRPF38B	100	91.606	Erinaceus_europaeus
ENSPVAG00000011929	-	100	95.073	ENSFDAG00000021009	PRPF38B	100	95.073	Fukomys_damarensis
ENSPVAG00000011929	-	100	97.445	ENSGGOG00000011288	PRPF38B	100	97.445	Gorilla_gorilla
ENSPVAG00000011929	-	91	87.751	ENSMGAG00000006188	PRPF38B	100	88.554	Meleagris_gallopavo
ENSPVAG00000011929	-	100	91.606	ENSMAUG00000019131	Prpf38b	100	89.964	Mesocricetus_auratus
ENSPVAG00000011929	-	100	91.241	MGP_CAROLIEiJ_G0025542	Prpf38b	99	95.745	Mus_caroli
ENSPVAG00000011929	-	100	92.518	ENSMUSG00000027881	Prpf38b	99	94.737	Mus_musculus
ENSPVAG00000011929	-	100	91.971	MGP_PahariEiJ_G0026988	Prpf38b	99	94.737	Mus_pahari
ENSPVAG00000011929	-	100	91.606	MGP_SPRETEiJ_G0026492	Prpf38b	99	94.737	Mus_spretus
ENSPVAG00000011929	-	100	90.511	ENSNLEG00000030268	-	100	89.234	Nomascus_leucogenys
ENSPVAG00000011929	-	100	96.357	ENSNLEG00000001645	-	100	96.357	Nomascus_leucogenys
ENSPVAG00000011929	-	100	97.445	ENSPPAG00000001260	PRPF38B	100	97.445	Pan_paniscus
ENSPVAG00000011929	-	100	98.361	ENSPPRG00000002116	PRPF38B	100	98.361	Panthera_pardus
ENSPVAG00000011929	-	100	97.445	ENSPTRG00000001032	PRPF38B	100	97.445	Pan_troglodytes
ENSPVAG00000011929	-	100	97.268	ENSPANG00000007560	PRPF38B	100	97.268	Papio_anubis
ENSPVAG00000011929	-	60	95.152	ENSPCIG00000024841	PRPF38B	60	94.833	Phascolarctos_cinereus
ENSPVAG00000011929	-	100	96.007	ENSSARG00000012818	-	100	96.007	Sorex_araneus
ENSPVAG00000011929	-	85	85.350	ENSTGUG00000004594	-	70	89.329	Taeniopygia_guttata
ENSPVAG00000011929	-	100	97.814	ENSUAMG00000023817	PRPF38B	100	97.814	Ursus_americanus