EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012066 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 62645 bases
Position: chrGeneScaffold_526:28399-91043
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011370	Ago_hook	PF10427.9	8.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012066	TNRC6A-201	5118	-	ENSPVAP00000011370	1706 (aa)	-	UPI00018B1E03

Gene Model

Click here to download ENSPVAG00000012066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012066	TNRC6A	60	41.995	ENSPVAG00000002008	TNRC6C	88	37.310
ENSPVAG00000012066	TNRC6A	56	35.090	ENSPVAG00000004975	TNRC6B	78	34.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012066	TNRC6A	99	70.955	ENSG00000090905	TNRC6A	89	71.126	Homo_sapiens
ENSPVAG00000012066	TNRC6A	97	72.268	ENSAMEG00000009333	TNRC6A	89	72.209	Ailuropoda_melanoleuca
ENSPVAG00000012066	TNRC6A	97	63.357	ENSAPLG00000009978	TNRC6A	89	62.965	Anas_platyrhynchos
ENSPVAG00000012066	TNRC6A	99	48.443	ENSACAG00000011857	TNRC6A	88	49.055	Anolis_carolinensis
ENSPVAG00000012066	TNRC6A	99	70.814	ENSANAG00000025252	TNRC6A	97	71.101	Aotus_nancymaae
ENSPVAG00000012066	TNRC6A	88	47.571	ENSAMXG00000019919	tnrc6a	88	46.654	Astyanax_mexicanus
ENSPVAG00000012066	TNRC6A	97	71.801	ENSBTAG00000017999	TNRC6A	88	71.386	Bos_taurus
ENSPVAG00000012066	TNRC6A	99	70.256	ENSCJAG00000020677	TNRC6A	89	70.484	Callithrix_jacchus
ENSPVAG00000012066	TNRC6A	99	71.347	ENSCAFG00000017531	TNRC6A	89	71.347	Canis_familiaris
ENSPVAG00000012066	TNRC6A	97	71.639	ENSCAFG00020021160	TNRC6A	89	70.691	Canis_lupus_dingo
ENSPVAG00000012066	TNRC6A	99	69.925	ENSCHIG00000019448	TNRC6A	97	69.235	Capra_hircus
ENSPVAG00000012066	TNRC6A	99	70.946	ENSTSYG00000012711	TNRC6A	89	71.117	Carlito_syrichta
ENSPVAG00000012066	TNRC6A	99	69.200	ENSCPOG00000036684	TNRC6A	89	68.624	Cavia_porcellus
ENSPVAG00000012066	TNRC6A	99	70.733	ENSCCAG00000033664	TNRC6A	89	70.962	Cebus_capucinus
ENSPVAG00000012066	TNRC6A	99	69.005	ENSCATG00000019284	TNRC6A	89	68.603	Cercocebus_atys
ENSPVAG00000012066	TNRC6A	99	68.711	ENSCLAG00000010217	TNRC6A	89	68.309	Chinchilla_lanigera
ENSPVAG00000012066	TNRC6A	99	70.864	ENSCSAG00000006561	TNRC6A	89	71.036	Chlorocebus_sabaeus
ENSPVAG00000012066	TNRC6A	95	69.555	ENSCHOG00000009374	TNRC6A	84	69.475	Choloepus_hoffmanni
ENSPVAG00000012066	TNRC6A	90	62.619	ENSCPBG00000001881	TNRC6A	88	62.301	Chrysemys_picta_bellii
ENSPVAG00000012066	TNRC6A	99	71.232	ENSCANG00000041549	TNRC6A	89	71.347	Colobus_angolensis_palliatus
ENSPVAG00000012066	TNRC6A	97	70.519	ENSCGRG00001015021	Tnrc6a	89	70.991	Cricetulus_griseus_chok1gshd
ENSPVAG00000012066	TNRC6A	99	67.662	ENSCGRG00000013351	Tnrc6a	89	67.796	Cricetulus_griseus_crigri
ENSPVAG00000012066	TNRC6A	89	47.158	ENSDARG00000079688	tnrc6a	87	47.382	Danio_rerio
ENSPVAG00000012066	TNRC6A	97	69.835	ENSDNOG00000013989	TNRC6A	89	69.702	Dasypus_novemcinctus
ENSPVAG00000012066	TNRC6A	97	65.760	ENSETEG00000014658	TNRC6A	89	65.556	Echinops_telfairi
ENSPVAG00000012066	TNRC6A	99	71.001	ENSEASG00005017693	TNRC6A	88	73.586	Equus_asinus_asinus
ENSPVAG00000012066	TNRC6A	99	71.404	ENSECAG00000025056	TNRC6A	88	73.650	Equus_caballus
ENSPVAG00000012066	TNRC6A	97	70.757	ENSEEUG00000004530	TNRC6A	89	70.557	Erinaceus_europaeus
ENSPVAG00000012066	TNRC6A	99	71.855	ENSFCAG00000025236	TNRC6A	89	72.128	Felis_catus
ENSPVAG00000012066	TNRC6A	99	62.891	ENSFALG00000003757	TNRC6A	88	62.742	Ficedula_albicollis
ENSPVAG00000012066	TNRC6A	90	63.111	ENSGALG00000006068	TNRC6A	88	63.135	Gallus_gallus
ENSPVAG00000012066	TNRC6A	90	62.595	ENSGAGG00000023209	TNRC6A	88	62.278	Gopherus_agassizii
ENSPVAG00000012066	TNRC6A	99	70.901	ENSGGOG00000005137	TNRC6A	89	71.016	Gorilla_gorilla
ENSPVAG00000012066	TNRC6A	99	68.642	ENSHGLG00000012474	-	89	68.297	Heterocephalus_glaber_female
ENSPVAG00000012066	TNRC6A	93	56.043	ENSHGLG00000007368	-	81	54.959	Heterocephalus_glaber_female
ENSPVAG00000012066	TNRC6A	99	68.682	ENSHGLG00100012496	-	90	68.164	Heterocephalus_glaber_male
ENSPVAG00000012066	TNRC6A	99	71.005	ENSSTOG00000023394	TNRC6A	88	71.119	Ictidomys_tridecemlineatus
ENSPVAG00000012066	TNRC6A	97	55.653	ENSLACG00000006277	TNRC6A	89	55.653	Latimeria_chalumnae
ENSPVAG00000012066	TNRC6A	99	80.658	ENSLOCG00000005517	tnrc6a	83	80.658	Lepisosteus_oculatus
ENSPVAG00000012066	TNRC6A	97	68.872	ENSLAFG00000004209	TNRC6A	89	67.336	Loxodonta_africana
ENSPVAG00000012066	TNRC6A	97	70.381	ENSMFAG00000003824	TNRC6A	88	70.264	Macaca_fascicularis
ENSPVAG00000012066	TNRC6A	99	70.888	ENSMMUG00000020428	TNRC6A	89	71.060	Macaca_mulatta
ENSPVAG00000012066	TNRC6A	99	70.883	ENSMNEG00000034854	TNRC6A	89	70.712	Macaca_nemestrina
ENSPVAG00000012066	TNRC6A	97	70.409	ENSMLEG00000042737	TNRC6A	88	69.116	Mandrillus_leucophaeus
ENSPVAG00000012066	TNRC6A	93	64.663	ENSMGAG00000006455	TNRC6A	89	61.726	Meleagris_gallopavo
ENSPVAG00000012066	TNRC6A	99	68.969	ENSMAUG00000012750	Tnrc6a	90	68.566	Mesocricetus_auratus
ENSPVAG00000012066	TNRC6A	99	70.843	ENSMICG00000030685	TNRC6A	89	70.898	Microcebus_murinus
ENSPVAG00000012066	TNRC6A	99	69.470	ENSMOCG00000000152	Tnrc6a	89	69.009	Microtus_ochrogaster
ENSPVAG00000012066	TNRC6A	99	63.158	ENSMODG00000016348	TNRC6A	87	63.441	Monodelphis_domestica
ENSPVAG00000012066	TNRC6A	99	69.226	MGP_CAROLIEiJ_G0030425	Tnrc6a	85	75.505	Mus_caroli
ENSPVAG00000012066	TNRC6A	99	69.297	ENSMUSG00000052707	Tnrc6a	85	75.421	Mus_musculus
ENSPVAG00000012066	TNRC6A	99	69.012	MGP_PahariEiJ_G0013635	Tnrc6a	99	66.695	Mus_pahari
ENSPVAG00000012066	TNRC6A	99	70.622	MGP_SPRETEiJ_G0031539	Tnrc6a	85	75.084	Mus_spretus
ENSPVAG00000012066	TNRC6A	97	61.987	ENSMPUG00000012324	TNRC6A	88	61.273	Mustela_putorius_furo
ENSPVAG00000012066	TNRC6A	97	71.378	ENSMLUG00000002701	TNRC6A	89	71.318	Myotis_lucifugus
ENSPVAG00000012066	TNRC6A	99	69.063	ENSNGAG00000020702	Tnrc6a	89	68.718	Nannospalax_galili
ENSPVAG00000012066	TNRC6A	97	70.516	ENSNLEG00000011851	TNRC6A	89	69.930	Nomascus_leucogenys
ENSPVAG00000012066	TNRC6A	75	76.046	ENSMEUG00000015959	-	66	75.469	Notamacropus_eugenii
ENSPVAG00000012066	TNRC6A	95	87.931	ENSOPRG00000005819	TNRC6A	85	87.931	Ochotona_princeps
ENSPVAG00000012066	TNRC6A	97	68.597	ENSODEG00000012802	TNRC6A	88	66.860	Octodon_degus
ENSPVAG00000012066	TNRC6A	86	66.029	ENSOANG00000007672	TNRC6A	88	65.435	Ornithorhynchus_anatinus
ENSPVAG00000012066	TNRC6A	97	69.821	ENSOCUG00000004325	TNRC6A	89	69.702	Oryctolagus_cuniculus
ENSPVAG00000012066	TNRC6A	99	70.940	ENSOGAG00000006666	TNRC6A	89	71.114	Otolemur_garnettii
ENSPVAG00000012066	TNRC6A	99	70.578	ENSOARG00000017950	TNRC6A	89	70.347	Ovis_aries
ENSPVAG00000012066	TNRC6A	99	70.753	ENSPPAG00000028379	TNRC6A	89	70.924	Pan_paniscus
ENSPVAG00000012066	TNRC6A	99	71.855	ENSPPRG00000005861	TNRC6A	89	72.028	Panthera_pardus
ENSPVAG00000012066	TNRC6A	99	70.955	ENSPTIG00000006346	TNRC6A	89	71.069	Panthera_tigris_altaica
ENSPVAG00000012066	TNRC6A	97	70.936	ENSPTRG00000007898	TNRC6A	88	70.877	Pan_troglodytes
ENSPVAG00000012066	TNRC6A	99	68.493	ENSPANG00000018523	TNRC6A	89	68.607	Papio_anubis
ENSPVAG00000012066	TNRC6A	75	60.518	ENSPSIG00000003965	TNRC6A	85	60.061	Pelodiscus_sinensis
ENSPVAG00000012066	TNRC6A	99	69.856	ENSPEMG00000016318	Tnrc6a	89	69.222	Peromyscus_maniculatus_bairdii
ENSPVAG00000012066	TNRC6A	97	64.383	ENSPCIG00000012106	TNRC6A	89	64.028	Phascolarctos_cinereus
ENSPVAG00000012066	TNRC6A	99	70.709	ENSPPYG00000007202	TNRC6A	89	70.767	Pongo_abelii
ENSPVAG00000012066	TNRC6A	99	66.324	ENSPCAG00000008260	TNRC6A	88	65.753	Procavia_capensis
ENSPVAG00000012066	TNRC6A	99	68.307	ENSPCOG00000010134	TNRC6A	89	68.421	Propithecus_coquereli
ENSPVAG00000012066	TNRC6A	97	70.533	ENSRNOG00000024737	Tnrc6a	88	70.336	Rattus_norvegicus
ENSPVAG00000012066	TNRC6A	97	71.412	ENSRBIG00000014222	TNRC6A	89	71.204	Rhinopithecus_bieti
ENSPVAG00000012066	TNRC6A	99	71.223	ENSRROG00000032360	TNRC6A	89	71.396	Rhinopithecus_roxellana
ENSPVAG00000012066	TNRC6A	97	71.057	ENSSBOG00000036197	TNRC6A	88	73.182	Saimiri_boliviensis_boliviensis
ENSPVAG00000012066	TNRC6A	91	63.873	ENSSHAG00000008811	TNRC6A	99	60.494	Sarcophilus_harrisii
ENSPVAG00000012066	TNRC6A	90	81.140	ENSSFOG00015008920	tnrc6a	86	75.564	Scleropages_formosus
ENSPVAG00000012066	TNRC6A	81	66.123	ENSSARG00000002479	TNRC6A	90	63.949	Sorex_araneus
ENSPVAG00000012066	TNRC6A	90	63.520	ENSSPUG00000010525	TNRC6A	88	63.369	Sphenodon_punctatus
ENSPVAG00000012066	TNRC6A	99	70.931	ENSSSCG00000038870	TNRC6A	97	71.274	Sus_scrofa
ENSPVAG00000012066	TNRC6A	99	61.137	ENSTGUG00000006142	TNRC6A	89	60.872	Taeniopygia_guttata
ENSPVAG00000012066	TNRC6A	97	69.014	ENSTBEG00000014965	TNRC6A	89	69.014	Tupaia_belangeri
ENSPVAG00000012066	TNRC6A	93	79.079	ENSTTRG00000002008	TNRC6A	82	78.940	Tursiops_truncatus
ENSPVAG00000012066	TNRC6A	89	68.762	ENSUAMG00000006656	-	93	67.984	Ursus_americanus
ENSPVAG00000012066	TNRC6A	99	71.103	ENSUMAG00000008274	TNRC6A	88	72.492	Ursus_maritimus
ENSPVAG00000012066	TNRC6A	99	71.354	ENSVVUG00000005380	TNRC6A	96	71.488	Vulpes_vulpes
ENSPVAG00000012066	TNRC6A	94	53.479	ENSXETG00000030437	TNRC6A	88	53.362	Xenopus_tropicalis