EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPVAG00000012309 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Plus strand
Length
86913 bases
Position
chrscaffold_1184:106421-193333
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58110
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58210
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58310
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58410
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58510
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58610
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58710
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58810
ENSPVAP00000011602zf-C2H2PF00096.261.3e-58910
ENSPVAP00000011602zf-C2H2PF00096.261.3e-581010
ENSPVAP00000011602zf-metPF12874.76.1e-1812
ENSPVAP00000011602zf-metPF12874.76.1e-1822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000012309PRDM5-2011797-ENSPVAP00000011602599 (aa)-UPI00018B32E6
Gene Model
Click here to download ENSPVAG00000012309's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012309's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPVAG00000012309PRDM57740.206ENSPVAG00000006095ZNF26940.206
ENSPVAG00000012309PRDM57736.247ENSPVAG00000012830-7335.684
ENSPVAG00000012309PRDM57739.032ENSPVAG00000005467ZNF817439.032
ENSPVAG00000012309PRDM57236.194ENSPVAG00000001626-8936.194
ENSPVAG00000012309PRDM59133.125ENSPVAG00000000361-8640.193
ENSPVAG00000012309PRDM55440.876ENSPVAG00000009457SNAI25740.876
ENSPVAG00000012309PRDM58434.906ENSPVAG00000004835ZNF4239631.319
ENSPVAG00000012309PRDM57840.230ENSPVAG00000015576ZNF2347840.230
ENSPVAG00000012309PRDM57742.029ENSPVAG00000010053ZFP69B6242.029
ENSPVAG00000012309PRDM59243.529ENSPVAG00000001511PRDM126041.573
ENSPVAG00000012309PRDM57839.819ENSPVAG00000000908ZNF5505739.819
ENSPVAG00000012309PRDM57740.217ENSPVAG00000010064ZNF7686143.307
ENSPVAG00000012309PRDM57846.789ENSPVAG00000008193ZNF2365246.789
ENSPVAG00000012309PRDM57941.033ENSPVAG00000009433-8541.033
ENSPVAG00000012309PRDM57632.591ENSPVAG00000004612ZNF3198630.366
ENSPVAG00000012309PRDM58736.655ENSPVAG00000013020ZBTB488436.655
ENSPVAG00000012309PRDM58136.878ENSPVAG00000004394ZNF1127738.663
ENSPVAG00000012309PRDM57734.943ENSPVAG00000004392ZNF2358835.736
ENSPVAG00000012309PRDM57941.033ENSPVAG00000009430-6141.033
ENSPVAG00000012309PRDM57839.869ENSPVAG00000002257-7539.869
ENSPVAG00000012309PRDM58138.679ENSPVAG00000015426ZNF5219738.679
ENSPVAG00000012309PRDM57737.954ENSPVAG00000001094-9137.954
ENSPVAG00000012309PRDM57236.527ENSPVAG00000001749PATZ15436.527
ENSPVAG00000012309PRDM55540.541ENSPVAG00000001140OVOL25835.366
ENSPVAG00000012309PRDM57335.762ENSPVAG00000004388ZNF2335735.762
ENSPVAG00000012309PRDM57737.097ENSPVAG00000015563-8636.187
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000012309PRDM510088.147ENSG00000138738PRDM59588.147Homo_sapiens
ENSPVAG00000012309PRDM510073.167ENSAPOG00000023220prdm59573.167Acanthochromis_polyacanthus
ENSPVAG00000012309PRDM59684.028ENSAMEG00000003050PRDM510084.028Ailuropoda_melanoleuca
ENSPVAG00000012309PRDM510071.500ENSACIG00000000406prdm59571.500Amphilophus_citrinellus
ENSPVAG00000012309PRDM510073.833ENSAOCG00000014806prdm59573.833Amphiprion_ocellaris
ENSPVAG00000012309PRDM510065.056ENSAPEG00000016846prdm59566.345Amphiprion_percula
ENSPVAG00000012309PRDM510074.667ENSATEG00000013829prdm59575.000Anabas_testudineus
ENSPVAG00000012309PRDM510079.734ENSAPLG00000013828PRDM510079.734Anas_platyrhynchos
ENSPVAG00000012309PRDM510074.457ENSACAG00000012999PRDM59574.457Anolis_carolinensis
ENSPVAG00000012309PRDM510093.987ENSANAG00000027411PRDM59393.987Aotus_nancymaae
ENSPVAG00000012309PRDM510073.500ENSACLG00000017996prdm59573.500Astatotilapia_calliptera
ENSPVAG00000012309PRDM58973.970ENSAMXG00000041864prdm59974.157Astyanax_mexicanus
ENSPVAG00000012309PRDM510088.314ENSBTAG00000012111PRDM59588.314Bos_taurus
ENSPVAG00000012309PRDM510093.987ENSCJAG00000003133PRDM59393.987Callithrix_jacchus
ENSPVAG00000012309PRDM59780.241ENSCAFG00000004179PRDM510080.241Canis_familiaris
ENSPVAG00000012309PRDM510088.481ENSCAFG00020017685PRDM59588.481Canis_lupus_dingo
ENSPVAG00000012309PRDM510087.813ENSCHIG00000018772PRDM59587.813Capra_hircus
ENSPVAG00000012309PRDM59986.606ENSTSYG00000009630PRDM59586.606Carlito_syrichta
ENSPVAG00000012309PRDM59592.000ENSCAPG00000015217PRDM510092.000Cavia_aperea
ENSPVAG00000012309PRDM510093.987ENSCPOG00000012883PRDM510093.987Cavia_porcellus
ENSPVAG00000012309PRDM510094.304ENSCCAG00000023157PRDM59394.304Cebus_capucinus
ENSPVAG00000012309PRDM510094.620ENSCATG00000042510PRDM59394.620Cercocebus_atys
ENSPVAG00000012309PRDM510093.987ENSCLAG00000005392PRDM510093.987Chinchilla_lanigera
ENSPVAG00000012309PRDM510084.641ENSCSAG00000003729PRDM59584.641Chlorocebus_sabaeus
ENSPVAG00000012309PRDM510084.266ENSCHOG00000007801PRDM58384.266Choloepus_hoffmanni
ENSPVAG00000012309PRDM510077.796ENSCPBG00000024735PRDM59578.125Chrysemys_picta_bellii
ENSPVAG00000012309PRDM510094.620ENSCANG00000036807PRDM59394.620Colobus_angolensis_palliatus
ENSPVAG00000012309PRDM510093.671ENSCGRG00001010581Prdm59691.333Cricetulus_griseus_chok1gshd
ENSPVAG00000012309PRDM510075.914ENSCGRG00000010996-9975.914Cricetulus_griseus_crigri
ENSPVAG00000012309PRDM510073.333ENSCSEG00000019979prdm59573.333Cynoglossus_semilaevis
ENSPVAG00000012309PRDM510071.500ENSCVAG00000013692prdm59571.500Cyprinodon_variegatus
ENSPVAG00000012309PRDM59973.456ENSDARG00000006288prdm59573.456Danio_rerio
ENSPVAG00000012309PRDM59687.304ENSDNOG00000002009PRDM510087.304Dasypus_novemcinctus
ENSPVAG00000012309PRDM510093.987ENSDORG00000007739Prdm59393.987Dipodomys_ordii
ENSPVAG00000012309PRDM59076.800ENSETEG00000020268PRDM59076.800Echinops_telfairi
ENSPVAG00000012309PRDM59966.779ENSEBUG00000004301prdm59566.946Eptatretus_burgeri
ENSPVAG00000012309PRDM510094.937ENSEASG00005018365PRDM59394.937Equus_asinus_asinus
ENSPVAG00000012309PRDM510070.213ENSECAG00000024747-9281.902Equus_caballus
ENSPVAG00000012309PRDM59987.719ENSECAG00000011516PRDM58587.719Equus_caballus
ENSPVAG00000012309PRDM59980.550ENSEEUG00000010306PRDM59580.550Erinaceus_europaeus
ENSPVAG00000012309PRDM59973.047ENSELUG00000005894prdm58773.047Esox_lucius
ENSPVAG00000012309PRDM510088.314ENSFCAG00000025656PRDM59588.314Felis_catus
ENSPVAG00000012309PRDM59570.690ENSFALG00000008381PRDM59070.690Ficedula_albicollis
ENSPVAG00000012309PRDM510094.304ENSFDAG00000021361PRDM59394.304Fukomys_damarensis
ENSPVAG00000012309PRDM59973.746ENSFHEG00000013040prdm59573.746Fundulus_heteroclitus
ENSPVAG00000012309PRDM59568.667ENSGMOG00000012038prdm58776.087Gadus_morhua
ENSPVAG00000012309PRDM510079.568ENSGALG00000011963PRDM59579.568Gallus_gallus
ENSPVAG00000012309PRDM59973.777ENSGAFG00000019233prdm59570.167Gambusia_affinis
ENSPVAG00000012309PRDM59875.560ENSGAGG00000020362PRDM59376.171Gopherus_agassizii
ENSPVAG00000012309PRDM510094.620ENSGGOG00000013562PRDM59394.620Gorilla_gorilla
ENSPVAG00000012309PRDM510073.333ENSHBUG00000023375prdm59573.333Haplochromis_burtoni
ENSPVAG00000012309PRDM510078.165ENSHGLG00000003010PRDM59285.127Heterocephalus_glaber_female
ENSPVAG00000012309PRDM510093.987ENSHGLG00100003696PRDM59393.987Heterocephalus_glaber_male
ENSPVAG00000012309PRDM59975.125ENSHCOG00000012131prdm59575.459Hippocampus_comes
ENSPVAG00000012309PRDM510075.208ENSIPUG00000001248prdm59575.541Ictalurus_punctatus
ENSPVAG00000012309PRDM510091.772ENSSTOG00000004741PRDM510091.772Ictidomys_tridecemlineatus
ENSPVAG00000012309PRDM510093.354ENSJJAG00000011464Prdm510093.354Jaculus_jaculus
ENSPVAG00000012309PRDM510073.667ENSKMAG00000013663prdm59573.667Kryptolebias_marmoratus
ENSPVAG00000012309PRDM510075.000ENSLBEG00000022736prdm59575.333Labrus_bergylta
ENSPVAG00000012309PRDM59677.990ENSLACG00000009187PRDM59978.028Latimeria_chalumnae
ENSPVAG00000012309PRDM59975.585ENSLOCG00000009778prdm59575.585Lepisosteus_oculatus
ENSPVAG00000012309PRDM510084.474ENSLAFG00000006532PRDM59988.291Loxodonta_africana
ENSPVAG00000012309PRDM510094.620ENSMFAG00000045845PRDM59394.620Macaca_fascicularis
ENSPVAG00000012309PRDM510094.620ENSMMUG00000003249PRDM59394.620Macaca_mulatta
ENSPVAG00000012309PRDM510094.620ENSMNEG00000019018PRDM59394.620Macaca_nemestrina
ENSPVAG00000012309PRDM510087.813ENSMLEG00000023145PRDM510087.813Mandrillus_leucophaeus
ENSPVAG00000012309PRDM510074.503ENSMAMG00000013419prdm59574.667Mastacembelus_armatus
ENSPVAG00000012309PRDM510073.333ENSMZEG00005020645prdm59573.333Maylandia_zebra
ENSPVAG00000012309PRDM510079.568ENSMGAG00000010710PRDM510079.568Meleagris_gallopavo
ENSPVAG00000012309PRDM510093.671ENSMAUG00000006768Prdm59691.333Mesocricetus_auratus
ENSPVAG00000012309PRDM510093.987ENSMICG00000001459PRDM59393.987Microcebus_murinus
ENSPVAG00000012309PRDM510093.671ENSMOCG00000016267Prdm59691.333Microtus_ochrogaster
ENSPVAG00000012309PRDM510073.500ENSMMOG00000006035prdm59573.500Mola_mola
ENSPVAG00000012309PRDM510075.622ENSMODG00000018942PRDM59575.622Monodelphis_domestica
ENSPVAG00000012309PRDM510070.167ENSMALG00000013934prdm59570.667Monopterus_albus
ENSPVAG00000012309PRDM510093.354MGP_CAROLIEiJ_G0028463Prdm59690.667Mus_caroli
ENSPVAG00000012309PRDM510093.671ENSMUSG00000029913Prdm59393.671Mus_musculus
ENSPVAG00000012309PRDM510093.354MGP_PahariEiJ_G0022203Prdm59690.667Mus_pahari
ENSPVAG00000012309PRDM510093.671MGP_SPRETEiJ_G0029467Prdm59393.671Mus_spretus
ENSPVAG00000012309PRDM510088.147ENSMPUG00000017415PRDM59588.147Mustela_putorius_furo
ENSPVAG00000012309PRDM59682.007ENSMLUG00000006097PRDM510082.007Myotis_lucifugus
ENSPVAG00000012309PRDM510093.671ENSNGAG00000018317Prdm59393.671Nannospalax_galili
ENSPVAG00000012309PRDM510065.025ENSNBRG00000004976prdm59569.667Neolamprologus_brichardi
ENSPVAG00000012309PRDM510094.620ENSNLEG00000009107PRDM59394.620Nomascus_leucogenys
ENSPVAG00000012309PRDM58378.571ENSMEUG00000006576-6678.571Notamacropus_eugenii
ENSPVAG00000012309PRDM510067.775ENSOPRG00000011066-8967.775Ochotona_princeps
ENSPVAG00000012309PRDM510089.911ENSODEG00000009133PRDM59389.911Octodon_degus
ENSPVAG00000012309PRDM510075.333ENSONIG00000003111prdm59575.333Oreochromis_niloticus
ENSPVAG00000012309PRDM59972.840ENSOANG00000015109PRDM59172.840Ornithorhynchus_anatinus
ENSPVAG00000012309PRDM55685.556ENSOANG00000006197-10085.556Ornithorhynchus_anatinus
ENSPVAG00000012309PRDM59880.034ENSOCUG00000013454PRDM59981.741Oryctolagus_cuniculus
ENSPVAG00000012309PRDM510073.167ENSORLG00000016247prdm59573.167Oryzias_latipes
ENSPVAG00000012309PRDM510072.833ENSORLG00020018051prdm59573.333Oryzias_latipes_hni
ENSPVAG00000012309PRDM510073.167ENSORLG00015013760prdm59573.167Oryzias_latipes_hsok
ENSPVAG00000012309PRDM510073.211ENSOMEG00000005143prdm59573.211Oryzias_melastigma
ENSPVAG00000012309PRDM58979.284ENSOGAG00000009996PRDM59878.879Otolemur_garnettii
ENSPVAG00000012309PRDM59986.885ENSOARG00000015473PRDM510086.871Ovis_aries
ENSPVAG00000012309PRDM510088.147ENSPPAG00000043045PRDM59988.055Pan_paniscus
ENSPVAG00000012309PRDM510088.314ENSPPRG00000001020PRDM59588.314Panthera_pardus
ENSPVAG00000012309PRDM510088.314ENSPTIG00000010807PRDM59588.314Panthera_tigris_altaica
ENSPVAG00000012309PRDM510094.620ENSPTRG00000016403PRDM59394.620Pan_troglodytes
ENSPVAG00000012309PRDM510094.620ENSPANG00000023612PRDM59394.620Papio_anubis
ENSPVAG00000012309PRDM59950.188ENSPKIG00000015492prdm59454.849Paramormyrops_kingsleyae
ENSPVAG00000012309PRDM510078.571ENSPSIG00000013505PRDM59578.738Pelodiscus_sinensis
ENSPVAG00000012309PRDM510070.833ENSPMGG00000012622prdm59571.167Periophthalmus_magnuspinnatus
ENSPVAG00000012309PRDM57768.599ENSPMAG00000005248prdm510068.599Petromyzon_marinus
ENSPVAG00000012309PRDM59866.845ENSPFOG00000018630prdm59166.845Poecilia_formosa
ENSPVAG00000012309PRDM510075.333ENSPLAG00000014148prdm59575.333Poecilia_latipinna
ENSPVAG00000012309PRDM510073.833ENSPMEG00000018002prdm59573.833Poecilia_mexicana
ENSPVAG00000012309PRDM510073.833ENSPREG00000018366prdm59573.833Poecilia_reticulata
ENSPVAG00000012309PRDM510088.147ENSPPYG00000015031PRDM59588.147Pongo_abelii
ENSPVAG00000012309PRDM510081.803ENSPCAG00000011671PRDM510081.803Procavia_capensis
ENSPVAG00000012309PRDM510093.987ENSPCOG00000022828PRDM59393.987Propithecus_coquereli
ENSPVAG00000012309PRDM510073.500ENSPNYG00000012194prdm59573.500Pundamilia_nyererei
ENSPVAG00000012309PRDM59772.109ENSPNAG00000023191-9972.712Pygocentrus_nattereri
ENSPVAG00000012309PRDM59973.077ENSPNAG00000026181prdm59573.623Pygocentrus_nattereri
ENSPVAG00000012309PRDM59980.072ENSRNOG00000023679Prdm59480.072Rattus_norvegicus
ENSPVAG00000012309PRDM510094.620ENSRBIG00000041307PRDM59394.620Rhinopithecus_bieti
ENSPVAG00000012309PRDM59976.887ENSRROG00000035343PRDM510077.963Rhinopithecus_roxellana
ENSPVAG00000012309PRDM510094.304ENSSBOG00000022100PRDM59394.304Saimiri_boliviensis_boliviensis
ENSPVAG00000012309PRDM59474.385ENSSHAG00000003250PRDM510074.385Sarcophilus_harrisii
ENSPVAG00000012309PRDM510070.833ENSSFOG00015020478prdm59571.000Scleropages_formosus
ENSPVAG00000012309PRDM510075.000ENSSMAG00000018844prdm59575.000Scophthalmus_maximus
ENSPVAG00000012309PRDM510073.333ENSSDUG00000020397prdm59573.667Seriola_dumerili
ENSPVAG00000012309PRDM510073.333ENSSLDG00000013353prdm59573.667Seriola_lalandi_dorsalis
ENSPVAG00000012309PRDM59093.162ENSSARG00000014129-7093.162Sorex_araneus
ENSPVAG00000012309PRDM510087.025ENSSPUG00000009941PRDM59686.667Sphenodon_punctatus
ENSPVAG00000012309PRDM510075.500ENSSPAG00000013866prdm59575.500Stegastes_partitus
ENSPVAG00000012309PRDM510088.982ENSSSCG00000009101PRDM59588.982Sus_scrofa
ENSPVAG00000012309PRDM510079.800ENSTGUG00000001920PRDM510079.800Taeniopygia_guttata
ENSPVAG00000012309PRDM510072.667ENSTRUG00000013850prdm59573.211Takifugu_rubripes
ENSPVAG00000012309PRDM510060.131ENSTNIG00000005901prdm59560.131Tetraodon_nigroviridis
ENSPVAG00000012309PRDM510082.192ENSTBEG00000015386PRDM58682.192Tupaia_belangeri
ENSPVAG00000012309PRDM510088.648ENSTTRG00000010996PRDM59588.648Tursiops_truncatus
ENSPVAG00000012309PRDM59994.017ENSUAMG00000009994PRDM57794.017Ursus_americanus
ENSPVAG00000012309PRDM510094.937ENSUMAG00000003733PRDM59994.937Ursus_maritimus
ENSPVAG00000012309PRDM510079.633ENSVPAG00000007435PRDM59879.633Vicugna_pacos
ENSPVAG00000012309PRDM59888.567ENSVVUG00000013192PRDM59988.567Vulpes_vulpes
ENSPVAG00000012309PRDM510074.000ENSXETG00000002101prdm59574.167Xenopus_tropicalis
ENSPVAG00000012309PRDM510073.667ENSXCOG00000008567prdm59574.000Xiphophorus_couchianus
ENSPVAG00000012309PRDM510073.667ENSXMAG00000013825prdm59574.000Xiphophorus_maculatus

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