EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012403 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 12529 bases
Position: chrGeneScaffold_3921:166727-179255
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011693	Anticodon_1	PF08264.13	1.8e-32	1	1
ENSPVAP00000011693	tRNA-synt_1	PF00133.22	2e-195	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012403	VARS-201	3771	-	ENSPVAP00000011693	1256 (aa)	-	UPI00018B2A81

Gene Model

Click here to download ENSPVAG00000012403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012403	VARS	81	49.758	ENSPVAG00000004197	VARS2	93	50.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012403	VARS	100	91.535	ENSG00000204394	VARS	97	98.225	Homo_sapiens
ENSPVAG00000012403	VARS	98	61.989	ENSAPOG00000020691	vars	99	61.711	Acanthochromis_polyacanthus
ENSPVAG00000012403	VARS	98	61.989	ENSAPOG00000020921	vars	99	61.711	Acanthochromis_polyacanthus
ENSPVAG00000012403	VARS	100	91.304	ENSAMEG00000006417	VARS	100	91.304	Ailuropoda_melanoleuca
ENSPVAG00000012403	VARS	100	63.451	ENSACIG00000013752	vars	100	63.108	Amphilophus_citrinellus
ENSPVAG00000012403	VARS	100	62.452	ENSAOCG00000002447	vars	100	61.804	Amphiprion_ocellaris
ENSPVAG00000012403	VARS	100	62.374	ENSAPEG00000010638	vars	99	62.345	Amphiprion_percula
ENSPVAG00000012403	VARS	100	62.362	ENSATEG00000020219	vars	100	61.781	Anabas_testudineus
ENSPVAG00000012403	VARS	90	67.708	ENSACAG00000029133	-	99	69.037	Anolis_carolinensis
ENSPVAG00000012403	VARS	100	91.297	ENSANAG00000015453	VARS	100	91.297	Aotus_nancymaae
ENSPVAG00000012403	VARS	100	62.946	ENSACLG00000025699	vars	97	62.607	Astatotilapia_calliptera
ENSPVAG00000012403	VARS	94	63.803	ENSAMXG00000017716	vars	95	63.636	Astyanax_mexicanus
ENSPVAG00000012403	VARS	100	91.693	ENSBTAG00000005631	VARS	100	91.693	Bos_taurus
ENSPVAG00000012403	VARS	100	91.060	ENSCJAG00000002604	VARS	100	91.060	Callithrix_jacchus
ENSPVAG00000012403	VARS	100	90.744	ENSCAFG00000000636	VARS	100	90.744	Canis_familiaris
ENSPVAG00000012403	VARS	94	91.216	ENSCAFG00020020790	VARS	98	89.695	Canis_lupus_dingo
ENSPVAG00000012403	VARS	100	91.772	ENSCHIG00000011008	VARS	100	91.772	Capra_hircus
ENSPVAG00000012403	VARS	100	91.456	ENSTSYG00000001567	VARS	100	91.456	Carlito_syrichta
ENSPVAG00000012403	VARS	91	86.678	ENSCAPG00000013736	VARS	99	86.678	Cavia_aperea
ENSPVAG00000012403	VARS	100	87.816	ENSCPOG00000000870	VARS	100	87.816	Cavia_porcellus
ENSPVAG00000012403	VARS	100	91.218	ENSCCAG00000035656	VARS	100	92.537	Cebus_capucinus
ENSPVAG00000012403	VARS	100	91.218	ENSCATG00000022394	VARS	100	91.218	Cercocebus_atys
ENSPVAG00000012403	VARS	88	86.177	ENSCLAG00000009470	VARS	92	86.177	Chinchilla_lanigera
ENSPVAG00000012403	VARS	100	91.456	ENSCSAG00000008784	VARS	100	91.456	Chlorocebus_sabaeus
ENSPVAG00000012403	VARS	77	73.511	ENSCPBG00000007943	VARS	96	73.511	Chrysemys_picta_bellii
ENSPVAG00000012403	VARS	100	91.377	ENSCANG00000033570	VARS	100	91.377	Colobus_angolensis_palliatus
ENSPVAG00000012403	VARS	100	89.082	ENSCGRG00001005686	Vars	100	89.082	Cricetulus_griseus_chok1gshd
ENSPVAG00000012403	VARS	92	83.668	ENSCGRG00000013352	Vars	78	83.668	Cricetulus_griseus_crigri
ENSPVAG00000012403	VARS	100	62.451	ENSCSEG00000019652	vars	100	62.767	Cynoglossus_semilaevis
ENSPVAG00000012403	VARS	100	62.782	ENSCVAG00000022398	vars	100	62.529	Cyprinodon_variegatus
ENSPVAG00000012403	VARS	100	62.326	ENSDARG00000044575	vars	100	62.578	Danio_rerio
ENSPVAG00000012403	VARS	84	91.157	ENSDORG00000016433	Vars	95	91.157	Dipodomys_ordii
ENSPVAG00000012403	VARS	68	85.895	ENSETEG00000003824	VARS	77	85.895	Echinops_telfairi
ENSPVAG00000012403	VARS	57	60.852	ENSEBUG00000004637	vars	100	61.126	Eptatretus_burgeri
ENSPVAG00000012403	VARS	50	69.510	ENSEBUG00000007086	vars	84	68.586	Eptatretus_burgeri
ENSPVAG00000012403	VARS	100	92.880	ENSEASG00005015673	VARS	100	92.880	Equus_asinus_asinus
ENSPVAG00000012403	VARS	100	91.937	ENSECAG00000014620	VARS	100	92.648	Equus_caballus
ENSPVAG00000012403	VARS	83	90.311	ENSEEUG00000004116	VARS	83	90.311	Erinaceus_europaeus
ENSPVAG00000012403	VARS	100	62.066	ENSELUG00000006550	vars	97	62.298	Esox_lucius
ENSPVAG00000012403	VARS	100	91.614	ENSFCAG00000004510	VARS	100	91.614	Felis_catus
ENSPVAG00000012403	VARS	84	85.025	ENSFDAG00000011401	VARS	100	85.025	Fukomys_damarensis
ENSPVAG00000012403	VARS	100	62.917	ENSFHEG00000010672	vars	100	62.742	Fundulus_heteroclitus
ENSPVAG00000012403	VARS	92	63.667	ENSGMOG00000014908	vars	97	64.226	Gadus_morhua
ENSPVAG00000012403	VARS	100	63.191	ENSGAFG00000021630	vars	100	62.937	Gambusia_affinis
ENSPVAG00000012403	VARS	92	63.933	ENSGACG00000009601	vars	98	63.478	Gasterosteus_aculeatus
ENSPVAG00000012403	VARS	100	91.693	ENSGGOG00000011364	VARS	100	91.693	Gorilla_gorilla
ENSPVAG00000012403	VARS	100	62.946	ENSHBUG00000017151	vars	97	62.607	Haplochromis_burtoni
ENSPVAG00000012403	VARS	100	86.946	ENSHGLG00000011646	VARS	100	87.104	Heterocephalus_glaber_female
ENSPVAG00000012403	VARS	93	79.070	ENSHGLG00100018062	VARS	100	79.070	Heterocephalus_glaber_male
ENSPVAG00000012403	VARS	90	71.516	ENSHCOG00000012198	vars	92	71.516	Hippocampus_comes
ENSPVAG00000012403	VARS	100	62.879	ENSIPUG00000005218	vars	100	62.879	Ictalurus_punctatus
ENSPVAG00000012403	VARS	100	90.909	ENSSTOG00000013112	VARS	100	90.909	Ictidomys_tridecemlineatus
ENSPVAG00000012403	VARS	100	87.737	ENSJJAG00000019749	-	100	87.737	Jaculus_jaculus
ENSPVAG00000012403	VARS	100	69.383	ENSJJAG00000015343	-	100	70.016	Jaculus_jaculus
ENSPVAG00000012403	VARS	100	62.559	ENSKMAG00000009455	vars	100	62.717	Kryptolebias_marmoratus
ENSPVAG00000012403	VARS	95	69.487	ENSLBEG00000010341	vars	100	61.818	Labrus_bergylta
ENSPVAG00000012403	VARS	94	59.819	ENSLACG00000015232	VARS	99	60.246	Latimeria_chalumnae
ENSPVAG00000012403	VARS	100	64.219	ENSLOCG00000004240	vars	100	64.325	Lepisosteus_oculatus
ENSPVAG00000012403	VARS	100	90.111	ENSLAFG00000023090	VARS	100	90.585	Loxodonta_africana
ENSPVAG00000012403	VARS	100	91.456	ENSMFAG00000001032	VARS	100	91.456	Macaca_fascicularis
ENSPVAG00000012403	VARS	100	91.456	ENSMMUG00000006828	VARS	100	91.456	Macaca_mulatta
ENSPVAG00000012403	VARS	100	91.456	ENSMNEG00000042072	VARS	100	91.456	Macaca_nemestrina
ENSPVAG00000012403	VARS	100	91.377	ENSMLEG00000039307	VARS	100	91.377	Mandrillus_leucophaeus
ENSPVAG00000012403	VARS	100	62.335	ENSMAMG00000003949	vars	100	62.461	Mastacembelus_armatus
ENSPVAG00000012403	VARS	100	62.946	ENSMZEG00005018327	vars	100	62.352	Maylandia_zebra
ENSPVAG00000012403	VARS	100	88.766	ENSMAUG00000006715	Vars	100	88.766	Mesocricetus_auratus
ENSPVAG00000012403	VARS	100	90.348	ENSMICG00000003548	VARS	100	91.542	Microcebus_murinus
ENSPVAG00000012403	VARS	100	87.184	ENSMOCG00000015404	Vars	100	87.500	Microtus_ochrogaster
ENSPVAG00000012403	VARS	100	61.852	ENSMMOG00000015801	vars	100	61.695	Mola_mola
ENSPVAG00000012403	VARS	100	83.386	ENSMODG00000015204	-	100	83.386	Monodelphis_domestica
ENSPVAG00000012403	VARS	100	62.520	ENSMALG00000022532	vars	100	62.313	Monopterus_albus
ENSPVAG00000012403	VARS	100	89.557	MGP_CAROLIEiJ_G0021491	Vars	100	89.953	Mus_caroli
ENSPVAG00000012403	VARS	100	89.320	ENSMUSG00000007029	Vars	100	89.715	Mus_musculus
ENSPVAG00000012403	VARS	100	89.399	MGP_PahariEiJ_G0020486	Vars	100	89.399	Mus_pahari
ENSPVAG00000012403	VARS	100	89.399	MGP_SPRETEiJ_G0022396	Vars	100	89.794	Mus_spretus
ENSPVAG00000012403	VARS	100	91.060	ENSMPUG00000010821	VARS	100	91.060	Mustela_putorius_furo
ENSPVAG00000012403	VARS	78	91.296	ENSMLUG00000013126	VARS	100	91.296	Myotis_lucifugus
ENSPVAG00000012403	VARS	100	89.003	ENSNGAG00000012151	Vars	100	89.478	Nannospalax_galili
ENSPVAG00000012403	VARS	100	62.713	ENSNBRG00000020520	vars	100	62.374	Neolamprologus_brichardi
ENSPVAG00000012403	VARS	100	90.902	ENSNLEG00000006351	VARS	100	90.902	Nomascus_leucogenys
ENSPVAG00000012403	VARS	100	79.984	ENSMEUG00000011378	VARS	100	79.984	Notamacropus_eugenii
ENSPVAG00000012403	VARS	100	89.320	ENSOPRG00000003607	VARS	100	89.320	Ochotona_princeps
ENSPVAG00000012403	VARS	100	87.579	ENSODEG00000017681	VARS	100	87.579	Octodon_degus
ENSPVAG00000012403	VARS	100	63.331	ENSONIG00000013064	vars	99	65.538	Oreochromis_niloticus
ENSPVAG00000012403	VARS	77	75.030	ENSOANG00000005400	VARS	98	74.554	Ornithorhynchus_anatinus
ENSPVAG00000012403	VARS	100	88.310	ENSOCUG00000022463	VARS	100	88.389	Oryctolagus_cuniculus
ENSPVAG00000012403	VARS	100	62.289	ENSORLG00000013063	vars	100	62.260	Oryzias_latipes
ENSPVAG00000012403	VARS	100	62.760	ENSORLG00020003504	vars	100	62.587	Oryzias_latipes_hni
ENSPVAG00000012403	VARS	100	62.926	ENSORLG00015009001	vars	100	62.674	Oryzias_latipes_hsok
ENSPVAG00000012403	VARS	100	62.577	ENSOMEG00000015016	vars	100	62.327	Oryzias_melastigma
ENSPVAG00000012403	VARS	100	90.823	ENSOGAG00000007515	VARS	100	90.823	Otolemur_garnettii
ENSPVAG00000012403	VARS	100	91.693	ENSPPAG00000034012	VARS	100	91.693	Pan_paniscus
ENSPVAG00000012403	VARS	100	91.772	ENSPPRG00000014855	VARS	100	91.772	Panthera_pardus
ENSPVAG00000012403	VARS	85	91.543	ENSPTIG00000010462	VARS	95	91.575	Panthera_tigris_altaica
ENSPVAG00000012403	VARS	100	91.614	ENSPTRG00000017985	VARS	100	91.614	Pan_troglodytes
ENSPVAG00000012403	VARS	100	89.826	ENSPANG00000014565	VARS	100	89.826	Papio_anubis
ENSPVAG00000012403	VARS	87	71.254	ENSPKIG00000016304	vars	94	68.845	Paramormyrops_kingsleyae
ENSPVAG00000012403	VARS	100	63.722	ENSPMGG00000023909	vars	100	64.038	Periophthalmus_magnuspinnatus
ENSPVAG00000012403	VARS	100	90.190	ENSPEMG00000006639	Vars	100	90.190	Peromyscus_maniculatus_bairdii
ENSPVAG00000012403	VARS	100	82.991	ENSPCIG00000018553	VARS	100	82.991	Phascolarctos_cinereus
ENSPVAG00000012403	VARS	100	63.424	ENSPFOG00000015690	vars	100	63.170	Poecilia_formosa
ENSPVAG00000012403	VARS	100	63.965	ENSPLAG00000009590	vars	100	63.965	Poecilia_latipinna
ENSPVAG00000012403	VARS	100	63.424	ENSPMEG00000004708	vars	100	63.170	Poecilia_mexicana
ENSPVAG00000012403	VARS	100	61.725	ENSPREG00000013264	vars	100	61.647	Poecilia_reticulata
ENSPVAG00000012403	VARS	100	89.794	ENSPPYG00000016460	VARS	100	89.794	Pongo_abelii
ENSPVAG00000012403	VARS	86	91.023	ENSPCAG00000013565	VARS	86	91.023	Procavia_capensis
ENSPVAG00000012403	VARS	100	90.672	ENSPCOG00000010942	VARS	100	91.383	Propithecus_coquereli
ENSPVAG00000012403	VARS	100	62.946	ENSPNYG00000022511	vars	100	62.607	Pundamilia_nyererei
ENSPVAG00000012403	VARS	100	62.607	ENSPNAG00000020962	vars	95	69.378	Pygocentrus_nattereri
ENSPVAG00000012403	VARS	100	89.557	ENSRNOG00000000867	Vars	100	89.557	Rattus_norvegicus
ENSPVAG00000012403	VARS	100	91.456	ENSRBIG00000041669	VARS	100	91.456	Rhinopithecus_bieti
ENSPVAG00000012403	VARS	100	91.456	ENSRROG00000045490	VARS	100	91.456	Rhinopithecus_roxellana
ENSPVAG00000012403	VARS	100	90.981	ENSSBOG00000035402	VARS	100	90.981	Saimiri_boliviensis_boliviensis
ENSPVAG00000012403	VARS	100	78.319	ENSSHAG00000006937	VARS	100	78.555	Sarcophilus_harrisii
ENSPVAG00000012403	VARS	100	62.625	ENSSFOG00015014272	vars	94	71.226	Scleropages_formosus
ENSPVAG00000012403	VARS	100	61.146	ENSSMAG00000009596	vars	99	61.348	Scophthalmus_maximus
ENSPVAG00000012403	VARS	100	62.307	ENSSDUG00000014177	vars	100	62.277	Seriola_dumerili
ENSPVAG00000012403	VARS	100	62.229	ENSSLDG00000025316	vars	100	62.355	Seriola_lalandi_dorsalis
ENSPVAG00000012403	VARS	100	62.626	ENSSPAG00000017068	vars	100	62.597	Stegastes_partitus
ENSPVAG00000012403	VARS	100	90.198	ENSSSCG00000038950	VARS	100	90.909	Sus_scrofa
ENSPVAG00000012403	VARS	82	61.457	ENSTRUG00000012307	vars	98	61.159	Takifugu_rubripes
ENSPVAG00000012403	VARS	100	62.295	ENSTNIG00000008011	vars	100	62.187	Tetraodon_nigroviridis
ENSPVAG00000012403	VARS	55	97.004	ENSTBEG00000004728	-	61	97.004	Tupaia_belangeri
ENSPVAG00000012403	VARS	100	82.991	ENSTTRG00000014128	VARS	100	82.991	Tursiops_truncatus
ENSPVAG00000012403	VARS	100	87.343	ENSUAMG00000010424	VARS	100	87.343	Ursus_americanus
ENSPVAG00000012403	VARS	93	89.206	ENSUMAG00000013486	VARS	98	89.365	Ursus_maritimus
ENSPVAG00000012403	VARS	100	90.514	ENSVVUG00000021323	VARS	100	90.593	Vulpes_vulpes
ENSPVAG00000012403	VARS	96	61.452	ENSXETG00000024076	vars	98	61.259	Xenopus_tropicalis
ENSPVAG00000012403	VARS	100	63.543	ENSXCOG00000019172	vars	100	63.286	Xiphophorus_couchianus
ENSPVAG00000012403	VARS	100	63.268	ENSXMAG00000010927	vars	100	63.015	Xiphophorus_maculatus