EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012663 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 17795 bases
Position: chrGeneScaffold_2840:22401-40195
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011942	PABP	PF00658.18	3.1e-27	1	1
ENSPVAP00000011942	RRM_5	PF13893.6	1.2e-08	1	1
ENSPVAP00000011942	RRM_1	PF00076.22	1.2e-87	1	4
ENSPVAP00000011942	RRM_1	PF00076.22	1.2e-87	2	4
ENSPVAP00000011942	RRM_1	PF00076.22	1.2e-87	3	4
ENSPVAP00000011942	RRM_1	PF00076.22	1.2e-87	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012663	PABPC1L-201	1824	-	ENSPVAP00000011942	607 (aa)	-	UPI00018B2B9A

Gene Model

Click here to download ENSPVAG00000012663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012663	PABPC1L	100	67.035	ENSPVAG00000016640	PABPC1	99	67.035
ENSPVAG00000012663	PABPC1L	63	40.278	ENSPVAG00000014893	ELAVL3	91	40.278
ENSPVAG00000012663	PABPC1L	59	58.889	ENSPVAG00000006465	PABPC5	95	59.066
ENSPVAG00000012663	PABPC1L	58	40.278	ENSPVAG00000002688	ELAVL2	85	40.278
ENSPVAG00000012663	PABPC1L	58	71.795	ENSPVAG00000016117	-	98	71.795
ENSPVAG00000012663	PABPC1L	99	58.784	ENSPVAG00000002187	PABPC4	99	58.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012663	PABPC1L	99	85.574	ENSG00000101104	PABPC1L	99	91.049	Homo_sapiens
ENSPVAG00000012663	PABPC1L	99	65.127	ENSAPOG00000010842	pabpc1l	99	65.287	Acanthochromis_polyacanthus
ENSPVAG00000012663	PABPC1L	99	77.344	ENSAMEG00000004099	PABPC1L	100	77.245	Ailuropoda_melanoleuca
ENSPVAG00000012663	PABPC1L	98	71.256	ENSACIG00000021004	-	99	71.256	Amphilophus_citrinellus
ENSPVAG00000012663	PABPC1L	99	65.452	ENSAOCG00000006167	-	99	65.665	Amphiprion_ocellaris
ENSPVAG00000012663	PABPC1L	99	67.205	ENSAPEG00000010558	-	97	81.188	Amphiprion_percula
ENSPVAG00000012663	PABPC1L	99	67.585	ENSATEG00000007428	pabpc1l	99	67.585	Anabas_testudineus
ENSPVAG00000012663	PABPC1L	98	73.127	ENSAPLG00000008415	PABPC1L	99	72.903	Anas_platyrhynchos
ENSPVAG00000012663	PABPC1L	99	71.746	ENSACAG00000011841	PABPC1L	98	71.746	Anolis_carolinensis
ENSPVAG00000012663	PABPC1L	99	83.607	ENSANAG00000026826	PABPC1L	99	83.607	Aotus_nancymaae
ENSPVAG00000012663	PABPC1L	99	65.920	ENSACLG00000024791	pabpc1l	99	65.920	Astatotilapia_calliptera
ENSPVAG00000012663	PABPC1L	99	70.288	ENSAMXG00000013552	pabpc1l	99	70.288	Astyanax_mexicanus
ENSPVAG00000012663	PABPC1L	60	97.024	ENSBTAG00000055300	-	100	97.024	Bos_taurus
ENSPVAG00000012663	PABPC1L	67	74.007	ENSBTAG00000016849	PABPC1L	83	74.007	Bos_taurus
ENSPVAG00000012663	PABPC1L	60	77.586	ENSCJAG00000038506	-	100	77.586	Callithrix_jacchus
ENSPVAG00000012663	PABPC1L	99	84.754	ENSCJAG00000017628	PABPC1L	99	84.754	Callithrix_jacchus
ENSPVAG00000012663	PABPC1L	99	75.231	ENSCAFG00000009573	PABPC1L	100	75.231	Canis_familiaris
ENSPVAG00000012663	PABPC1L	100	88.707	ENSCAFG00020013828	PABPC1L	99	88.707	Canis_lupus_dingo
ENSPVAG00000012663	PABPC1L	98	85.570	ENSCHIG00000025759	PABPC1L	91	85.570	Capra_hircus
ENSPVAG00000012663	PABPC1L	99	82.815	ENSTSYG00000006645	PABPC1L	99	82.815	Carlito_syrichta
ENSPVAG00000012663	PABPC1L	98	75.691	ENSCAPG00000014519	PABPC1L	99	75.691	Cavia_aperea
ENSPVAG00000012663	PABPC1L	99	78.409	ENSCPOG00000013633	PABPC1L	99	78.409	Cavia_porcellus
ENSPVAG00000012663	PABPC1L	99	84.098	ENSCCAG00000023338	PABPC1L	99	84.098	Cebus_capucinus
ENSPVAG00000012663	PABPC1L	99	85.574	ENSCATG00000034065	PABPC1L	99	85.574	Cercocebus_atys
ENSPVAG00000012663	PABPC1L	99	78.734	ENSCLAG00000005298	PABPC1L	99	78.734	Chinchilla_lanigera
ENSPVAG00000012663	PABPC1L	99	85.574	ENSCSAG00000014242	PABPC1L	99	85.574	Chlorocebus_sabaeus
ENSPVAG00000012663	PABPC1L	72	81.179	ENSCPBG00000017755	-	99	81.179	Chrysemys_picta_bellii
ENSPVAG00000012663	PABPC1L	52	79.545	ENSCPBG00000007810	-	81	79.545	Chrysemys_picta_bellii
ENSPVAG00000012663	PABPC1L	97	49.390	ENSCING00000002796	-	97	49.390	Ciona_intestinalis
ENSPVAG00000012663	PABPC1L	99	54.777	ENSCSAVG00000003102	-	100	81.507	Ciona_savignyi
ENSPVAG00000012663	PABPC1L	99	57.097	ENSCSAVG00000004246	-	89	77.108	Ciona_savignyi
ENSPVAG00000012663	PABPC1L	99	80.775	ENSCANG00000037530	PABPC1L	99	80.775	Colobus_angolensis_palliatus
ENSPVAG00000012663	PABPC1L	99	75.041	ENSCGRG00001021938	Pabpc1l	99	75.041	Cricetulus_griseus_chok1gshd
ENSPVAG00000012663	PABPC1L	99	75.041	ENSCGRG00000007946	Pabpc1l	99	75.041	Cricetulus_griseus_crigri
ENSPVAG00000012663	PABPC1L	99	62.500	ENSCSEG00000021295	pabpc1l	99	62.500	Cynoglossus_semilaevis
ENSPVAG00000012663	PABPC1L	99	67.633	ENSCVAG00000015943	-	86	87.023	Cyprinodon_variegatus
ENSPVAG00000012663	PABPC1L	99	68.750	ENSDARG00000002597	pabpc1l	88	87.692	Danio_rerio
ENSPVAG00000012663	PABPC1L	99	86.066	ENSDNOG00000048450	PABPC1L	99	86.066	Dasypus_novemcinctus
ENSPVAG00000012663	PABPC1L	99	82.702	ENSDORG00000001067	Pabpc1l	99	82.702	Dipodomys_ordii
ENSPVAG00000012663	PABPC1L	93	89.431	ENSETEG00000009969	PABPC1L	72	89.431	Echinops_telfairi
ENSPVAG00000012663	PABPC1L	60	95.833	ENSEASG00005023408	-	100	95.833	Equus_asinus_asinus
ENSPVAG00000012663	PABPC1L	54	77.778	ENSEASG00005023407	-	73	77.778	Equus_asinus_asinus
ENSPVAG00000012663	PABPC1L	68	78.629	ENSECAG00000040139	-	89	78.629	Equus_caballus
ENSPVAG00000012663	PABPC1L	100	83.197	ENSEEUG00000005978	PABPC1L	99	83.197	Erinaceus_europaeus
ENSPVAG00000012663	PABPC1L	99	68.900	ENSELUG00000001811	pabpc1l	99	68.900	Esox_lucius
ENSPVAG00000012663	PABPC1L	100	88.707	ENSFCAG00000011692	PABPC1L	99	88.707	Felis_catus
ENSPVAG00000012663	PABPC1L	82	76.877	ENSFALG00000005372	PABPC1L	92	72.661	Ficedula_albicollis
ENSPVAG00000012663	PABPC1L	100	78.176	ENSFDAG00000008291	PABPC1L	99	78.176	Fukomys_damarensis
ENSPVAG00000012663	PABPC1L	99	68.167	ENSFHEG00000003398	pabpc1l	99	68.167	Fundulus_heteroclitus
ENSPVAG00000012663	PABPC1L	99	68.567	ENSGMOG00000004437	pabpc1l	99	68.344	Gadus_morhua
ENSPVAG00000012663	PABPC1L	98	68.729	ENSGALG00000004123	PABPC1L	99	82.254	Gallus_gallus
ENSPVAG00000012663	PABPC1L	99	65.084	ENSGAFG00000021057	pabpc1l	99	65.084	Gambusia_affinis
ENSPVAG00000012663	PABPC1L	99	65.397	ENSGACG00000002792	pabpc1l	100	65.397	Gasterosteus_aculeatus
ENSPVAG00000012663	PABPC1L	99	73.609	ENSGAGG00000000589	PABPC1L	98	73.609	Gopherus_agassizii
ENSPVAG00000012663	PABPC1L	99	85.574	ENSGGOG00000004584	PABPC1L	99	85.574	Gorilla_gorilla
ENSPVAG00000012663	PABPC1L	99	65.760	ENSHBUG00000006134	pabpc1l	99	65.760	Haplochromis_burtoni
ENSPVAG00000012663	PABPC1L	99	80.195	ENSHGLG00000008434	PABPC1L	99	80.195	Heterocephalus_glaber_female
ENSPVAG00000012663	PABPC1L	61	82.584	ENSHGLG00100019506	-	100	82.584	Heterocephalus_glaber_male
ENSPVAG00000012663	PABPC1L	99	80.195	ENSHGLG00100012151	PABPC1L	99	80.195	Heterocephalus_glaber_male
ENSPVAG00000012663	PABPC1L	99	66.225	ENSHCOG00000009270	pabpc1l	99	65.950	Hippocampus_comes
ENSPVAG00000012663	PABPC1L	58	60.920	ENSIPUG00000006780	-	85	60.920	Ictalurus_punctatus
ENSPVAG00000012663	PABPC1L	99	70.240	ENSIPUG00000012602	pabpc1l	99	70.240	Ictalurus_punctatus
ENSPVAG00000012663	PABPC1L	61	60.345	ENSIPUG00000006760	-	88	60.345	Ictalurus_punctatus
ENSPVAG00000012663	PABPC1L	99	83.115	ENSSTOG00000003739	PABPC1L	99	83.115	Ictidomys_tridecemlineatus
ENSPVAG00000012663	PABPC1L	98	66.423	ENSJJAG00000022406	Pabpc1l	99	63.921	Jaculus_jaculus
ENSPVAG00000012663	PABPC1L	99	68.085	ENSKMAG00000016847	pabpc1l	99	68.085	Kryptolebias_marmoratus
ENSPVAG00000012663	PABPC1L	99	65.819	ENSLBEG00000010084	pabpc1l	99	65.819	Labrus_bergylta
ENSPVAG00000012663	PABPC1L	99	68.878	ENSLACG00000005762	PABPC1L	99	70.255	Latimeria_chalumnae
ENSPVAG00000012663	PABPC1L	99	70.064	ENSLOCG00000007519	pabpc1l	99	70.064	Lepisosteus_oculatus
ENSPVAG00000012663	PABPC1L	99	82.080	ENSLAFG00000003553	PABPC1L	100	82.080	Loxodonta_africana
ENSPVAG00000012663	PABPC1L	99	85.902	ENSMFAG00000040365	PABPC1L	99	85.902	Macaca_fascicularis
ENSPVAG00000012663	PABPC1L	99	83.524	ENSMNEG00000032298	PABPC1L	99	83.524	Macaca_nemestrina
ENSPVAG00000012663	PABPC1L	99	85.574	ENSMLEG00000043139	PABPC1L	99	85.574	Mandrillus_leucophaeus
ENSPVAG00000012663	PABPC1L	98	65.742	ENSMAMG00000011854	pabpc1l	98	65.742	Mastacembelus_armatus
ENSPVAG00000012663	PABPC1L	99	65.920	ENSMZEG00005023713	pabpc1l	99	65.920	Maylandia_zebra
ENSPVAG00000012663	PABPC1L	99	73.355	ENSMGAG00000003674	PABPC1L	99	73.355	Meleagris_gallopavo
ENSPVAG00000012663	PABPC1L	99	73.582	ENSMOCG00000013186	Pabpc1l	99	73.582	Microtus_ochrogaster
ENSPVAG00000012663	PABPC1L	99	67.367	ENSMMOG00000020574	-	90	87.692	Mola_mola
ENSPVAG00000012663	PABPC1L	94	77.187	ENSMODG00000016198	PABPC1L	99	77.333	Monodelphis_domestica
ENSPVAG00000012663	PABPC1L	97	65.905	ENSMALG00000021622	pabpc1l	100	65.905	Monopterus_albus
ENSPVAG00000012663	PABPC1L	99	73.744	MGP_CAROLIEiJ_G0024627	Pabpc1l	100	73.744	Mus_caroli
ENSPVAG00000012663	PABPC1L	99	73.582	ENSMUSG00000054582	Pabpc1l	100	73.582	Mus_musculus
ENSPVAG00000012663	PABPC1L	99	74.551	MGP_PahariEiJ_G0026071	Pabpc1l	99	74.551	Mus_pahari
ENSPVAG00000012663	PABPC1L	99	73.744	MGP_SPRETEiJ_G0025549	Pabpc1l	100	73.744	Mus_spretus
ENSPVAG00000012663	PABPC1L	100	86.290	ENSMPUG00000017646	PABPC1L	99	86.290	Mustela_putorius_furo
ENSPVAG00000012663	PABPC1L	98	82.714	ENSMLUG00000006324	PABPC1L	98	82.714	Myotis_lucifugus
ENSPVAG00000012663	PABPC1L	99	77.778	ENSNGAG00000010458	Pabpc1l	99	77.778	Nannospalax_galili
ENSPVAG00000012663	PABPC1L	98	71.807	ENSNBRG00000016633	pabpc1l	99	71.807	Neolamprologus_brichardi
ENSPVAG00000012663	PABPC1L	89	72.263	ENSMEUG00000007905	-	89	72.263	Notamacropus_eugenii
ENSPVAG00000012663	PABPC1L	99	82.651	ENSOPRG00000011846	PABPC1L	99	82.651	Ochotona_princeps
ENSPVAG00000012663	PABPC1L	100	72.177	ENSODEG00000015482	PABPC1L	99	72.177	Octodon_degus
ENSPVAG00000012663	PABPC1L	58	75.625	ENSODEG00000002920	-	99	75.625	Octodon_degus
ENSPVAG00000012663	PABPC1L	99	66.240	ENSONIG00000017314	pabpc1l	99	66.240	Oreochromis_niloticus
ENSPVAG00000012663	PABPC1L	89	65.642	ENSOANG00000015793	-	100	65.642	Ornithorhynchus_anatinus
ENSPVAG00000012663	PABPC1L	99	75.077	ENSOCUG00000003005	PABPC1L	100	75.077	Oryctolagus_cuniculus
ENSPVAG00000012663	PABPC1L	98	70.118	ENSORLG00000010322	pabpc1l	99	70.118	Oryzias_latipes
ENSPVAG00000012663	PABPC1L	98	70.118	ENSORLG00020021193	pabpc1l	99	70.118	Oryzias_latipes_hni
ENSPVAG00000012663	PABPC1L	98	70.118	ENSORLG00015017018	pabpc1l	99	70.118	Oryzias_latipes_hsok
ENSPVAG00000012663	PABPC1L	99	63.318	ENSOMEG00000010789	pabpc1l	99	63.318	Oryzias_melastigma
ENSPVAG00000012663	PABPC1L	99	83.360	ENSOGAG00000032999	PABPC1L	100	83.360	Otolemur_garnettii
ENSPVAG00000012663	PABPC1L	99	86.326	ENSOARG00000004578	PABPC1L	99	86.326	Ovis_aries
ENSPVAG00000012663	PABPC1L	99	85.738	ENSPPAG00000039677	PABPC1L	99	85.738	Pan_paniscus
ENSPVAG00000012663	PABPC1L	61	81.173	ENSPPRG00000019327	-	98	81.173	Panthera_pardus
ENSPVAG00000012663	PABPC1L	99	88.704	ENSPTIG00000006524	PABPC1L	99	88.704	Panthera_tigris_altaica
ENSPVAG00000012663	PABPC1L	64	91.358	ENSPTRG00000013531	PABPC1L	99	91.358	Pan_troglodytes
ENSPVAG00000012663	PABPC1L	99	85.574	ENSPANG00000018788	PABPC1L	99	85.574	Papio_anubis
ENSPVAG00000012663	PABPC1L	54	83.206	ENSPKIG00000016810	-	93	83.206	Paramormyrops_kingsleyae
ENSPVAG00000012663	PABPC1L	99	69.132	ENSPKIG00000007322	pabpc1l	99	69.132	Paramormyrops_kingsleyae
ENSPVAG00000012663	PABPC1L	68	82.014	ENSPSIG00000013289	PABPC1L	99	82.014	Pelodiscus_sinensis
ENSPVAG00000012663	PABPC1L	54	86.364	ENSPMGG00000023117	pabpc1l	92	86.364	Periophthalmus_magnuspinnatus
ENSPVAG00000012663	PABPC1L	71	63.317	ENSPMGG00000023121	-	93	63.317	Periophthalmus_magnuspinnatus
ENSPVAG00000012663	PABPC1L	99	73.864	ENSPEMG00000020671	Pabpc1l	99	74.392	Peromyscus_maniculatus_bairdii
ENSPVAG00000012663	PABPC1L	99	68.618	ENSPFOG00000013241	pabpc1l	99	68.599	Poecilia_formosa
ENSPVAG00000012663	PABPC1L	54	88.462	ENSPLAG00000023686	-	92	88.462	Poecilia_latipinna
ENSPVAG00000012663	PABPC1L	99	68.760	ENSPLAG00000017490	-	99	68.760	Poecilia_latipinna
ENSPVAG00000012663	PABPC1L	54	88.462	ENSPMEG00000009185	-	88	88.462	Poecilia_mexicana
ENSPVAG00000012663	PABPC1L	99	68.558	ENSPMEG00000007677	pabpc1l	99	68.558	Poecilia_mexicana
ENSPVAG00000012663	PABPC1L	67	75.545	ENSPREG00000015886	pabpc1l	99	75.545	Poecilia_reticulata
ENSPVAG00000012663	PABPC1L	100	85.318	ENSPPYG00000011042	PABPC1L	99	85.318	Pongo_abelii
ENSPVAG00000012663	PABPC1L	62	90.625	ENSPCAG00000011787	-	75	90.625	Procavia_capensis
ENSPVAG00000012663	PABPC1L	99	83.690	ENSPCOG00000020630	PABPC1L	99	83.690	Propithecus_coquereli
ENSPVAG00000012663	PABPC1L	98	71.807	ENSPNYG00000004101	pabpc1l	99	71.807	Pundamilia_nyererei
ENSPVAG00000012663	PABPC1L	99	64.630	ENSPNAG00000021248	pabpc1l	99	64.630	Pygocentrus_nattereri
ENSPVAG00000012663	PABPC1L	99	74.346	ENSRNOG00000012750	Pabpc1l	99	74.346	Rattus_norvegicus
ENSPVAG00000012663	PABPC1L	99	85.246	ENSRBIG00000035381	PABPC1L	99	85.246	Rhinopithecus_bieti
ENSPVAG00000012663	PABPC1L	99	85.082	ENSRROG00000044498	PABPC1L	99	85.082	Rhinopithecus_roxellana
ENSPVAG00000012663	PABPC1L	99	83.934	ENSSBOG00000009532	-	99	83.934	Saimiri_boliviensis_boliviensis
ENSPVAG00000012663	PABPC1L	98	70.348	ENSSHAG00000011446	PABPC1L	100	70.348	Sarcophilus_harrisii
ENSPVAG00000012663	PABPC1L	99	70.806	ENSSFOG00015017304	pabpc1l	99	70.806	Scleropages_formosus
ENSPVAG00000012663	PABPC1L	99	65.495	ENSSMAG00000010516	pabpc1l	98	87.597	Scophthalmus_maximus
ENSPVAG00000012663	PABPC1L	99	68.051	ENSSDUG00000014743	pabpc1l	99	68.051	Seriola_dumerili
ENSPVAG00000012663	PABPC1L	98	73.494	ENSSLDG00000006981	pabpc1l	98	79.452	Seriola_lalandi_dorsalis
ENSPVAG00000012663	PABPC1L	99	72.063	ENSSPUG00000004233	PABPC1L	98	72.063	Sphenodon_punctatus
ENSPVAG00000012663	PABPC1L	99	64.145	ENSSPAG00000017137	pabpc1l	99	64.145	Stegastes_partitus
ENSPVAG00000012663	PABPC1L	99	84.893	ENSSSCG00000007382	PABPC1L	99	84.893	Sus_scrofa
ENSPVAG00000012663	PABPC1L	99	72.152	ENSTGUG00000005114	PABPC1L	99	72.152	Taeniopygia_guttata
ENSPVAG00000012663	PABPC1L	97	66.939	ENSTRUG00000011085	pabpc1l	97	66.939	Takifugu_rubripes
ENSPVAG00000012663	PABPC1L	99	64.537	ENSTNIG00000017903	pabpc1l	98	64.537	Tetraodon_nigroviridis
ENSPVAG00000012663	PABPC1L	94	93.814	ENSTBEG00000002851	PABPC1L	80	93.814	Tupaia_belangeri
ENSPVAG00000012663	PABPC1L	94	85.366	ENSTTRG00000007618	PABPC1L	100	85.593	Tursiops_truncatus
ENSPVAG00000012663	PABPC1L	100	84.779	ENSUAMG00000017682	PABPC1L	99	84.779	Ursus_americanus
ENSPVAG00000012663	PABPC1L	67	88.076	ENSUMAG00000025436	PABPC1L	94	88.076	Ursus_maritimus
ENSPVAG00000012663	PABPC1L	99	92.885	ENSVVUG00000018939	PABPC1L	99	92.885	Vulpes_vulpes
ENSPVAG00000012663	PABPC1L	99	67.250	ENSXETG00000022831	pabpc1l	99	67.250	Xenopus_tropicalis
ENSPVAG00000012663	PABPC1L	98	71.496	ENSXCOG00000005459	pabpc1l	99	83.688	Xiphophorus_couchianus
ENSPVAG00000012663	PABPC1L	99	68.599	ENSXMAG00000017135	pabpc1l	99	68.599	Xiphophorus_maculatus