EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012674 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 85232 bases
Position: chrGeneScaffold_292:84109-169340
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011954	RNA_pol_Rpb1_5	PF04998.17	3.6e-103	1	1
ENSPVAP00000011954	RNA_pol_Rpb1_4	PF05000.17	5e-08	1	1
ENSPVAP00000011954	RNA_pol_Rpb1_2	PF00623.20	1e-69	1	1
ENSPVAP00000011954	RNA_pol_Rpb1_3	PF04983.18	1.6e-33	1	1
ENSPVAP00000011954	RNA_pol_Rpb1_1	PF04997.12	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012675	POLR1A-201	5160	-	ENSPVAP00000011954	1719 (aa)	-	UPI00018B39E0

Gene Model

Click here to download ENSPVAG00000012674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012674	POLR1A	55	34.951	ENSPVAG00000015553	POLR3A	63	34.951
ENSPVAG00000012674	POLR1A	66	33.636	ENSPVAG00000005069	-	51	51.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012674	POLR1A	95	91.873	ENSG00000068654	POLR1A	95	92.647	Homo_sapiens
ENSPVAG00000012674	POLR1A	64	69.127	ENSAPOG00000017945	polr1a	93	68.575	Acanthochromis_polyacanthus
ENSPVAG00000012674	POLR1A	95	92.933	ENSAMEG00000005807	POLR1A	95	93.382	Ailuropoda_melanoleuca
ENSPVAG00000012674	POLR1A	91	64.159	ENSACIG00000022147	polr1a	94	64.901	Amphilophus_citrinellus
ENSPVAG00000012674	POLR1A	95	66.494	ENSAOCG00000017336	polr1a	97	66.201	Amphiprion_ocellaris
ENSPVAG00000012674	POLR1A	95	66.420	ENSAPEG00000016105	polr1a	93	72.917	Amphiprion_percula
ENSPVAG00000012674	POLR1A	95	65.934	ENSATEG00000016773	polr1a	95	65.984	Anabas_testudineus
ENSPVAG00000012674	POLR1A	81	70.830	ENSAPLG00000013871	POLR1A	92	69.735	Anas_platyrhynchos
ENSPVAG00000012674	POLR1A	95	69.236	ENSACAG00000012141	POLR1A	95	68.429	Anolis_carolinensis
ENSPVAG00000012674	POLR1A	95	89.753	ENSANAG00000033927	POLR1A	95	90.441	Aotus_nancymaae
ENSPVAG00000012674	POLR1A	95	63.932	ENSACLG00000020541	polr1a	93	63.596	Astatotilapia_calliptera
ENSPVAG00000012674	POLR1A	95	89.753	ENSBTAG00000006481	POLR1A	95	90.441	Bos_taurus
ENSPVAG00000012674	POLR1A	93	40.145	WBGene00012999	rpoa-1	77	56.522	Caenorhabditis_elegans
ENSPVAG00000012674	POLR1A	95	88.693	ENSCJAG00000019547	POLR1A	95	89.338	Callithrix_jacchus
ENSPVAG00000012674	POLR1A	95	91.873	ENSCAFG00000007613	POLR1A	95	92.279	Canis_familiaris
ENSPVAG00000012674	POLR1A	95	90.278	ENSCAFG00020014752	POLR1A	95	90.614	Canis_lupus_dingo
ENSPVAG00000012674	POLR1A	95	87.543	ENSCHIG00000018204	POLR1A	95	88.129	Capra_hircus
ENSPVAG00000012674	POLR1A	95	86.572	ENSTSYG00000002761	POLR1A	95	86.765	Carlito_syrichta
ENSPVAG00000012674	POLR1A	93	81.296	ENSCAPG00000010132	POLR1A	93	90.306	Cavia_aperea
ENSPVAG00000012674	POLR1A	95	89.123	ENSCPOG00000012350	POLR1A	95	89.781	Cavia_porcellus
ENSPVAG00000012674	POLR1A	95	89.399	ENSCCAG00000019839	POLR1A	95	90.074	Cebus_capucinus
ENSPVAG00000012674	POLR1A	95	91.166	ENSCATG00000029786	POLR1A	95	91.912	Cercocebus_atys
ENSPVAG00000012674	POLR1A	95	88.889	ENSCLAG00000005187	POLR1A	95	89.531	Chinchilla_lanigera
ENSPVAG00000012674	POLR1A	95	91.166	ENSCSAG00000016251	POLR1A	95	91.912	Chlorocebus_sabaeus
ENSPVAG00000012674	POLR1A	95	73.599	ENSCPBG00000001115	POLR1A	94	73.948	Chrysemys_picta_bellii
ENSPVAG00000012674	POLR1A	94	47.942	ENSCSAVG00000007184	-	95	46.701	Ciona_savignyi
ENSPVAG00000012674	POLR1A	95	90.459	ENSCANG00000031785	POLR1A	95	91.176	Colobus_angolensis_palliatus
ENSPVAG00000012674	POLR1A	92	95.769	ENSCGRG00001006651	Polr1a	95	95.769	Cricetulus_griseus_chok1gshd
ENSPVAG00000012674	POLR1A	60	82.802	ENSCGRG00000010834	Polr1a	100	82.415	Cricetulus_griseus_crigri
ENSPVAG00000012674	POLR1A	94	61.641	ENSCSEG00000020190	polr1a	95	62.158	Cynoglossus_semilaevis
ENSPVAG00000012674	POLR1A	95	63.425	ENSCVAG00000020941	polr1a	95	64.391	Cyprinodon_variegatus
ENSPVAG00000012674	POLR1A	95	66.986	ENSDARG00000098375	polr1a	95	66.593	Danio_rerio
ENSPVAG00000012674	POLR1A	95	83.158	ENSDNOG00000010829	POLR1A	95	83.577	Dasypus_novemcinctus
ENSPVAG00000012674	POLR1A	95	86.544	ENSDORG00000008298	Polr1a	94	86.397	Dipodomys_ordii
ENSPVAG00000012674	POLR1A	72	48.778	FBgn0019938	RpI1	91	46.148	Drosophila_melanogaster
ENSPVAG00000012674	POLR1A	68	100.000	ENSETEG00000000412	-	67	100.000	Echinops_telfairi
ENSPVAG00000012674	POLR1A	75	66.667	ENSEBUG00000005667	-	93	66.667	Eptatretus_burgeri
ENSPVAG00000012674	POLR1A	95	93.640	ENSEASG00005001625	POLR1A	95	94.485	Equus_asinus_asinus
ENSPVAG00000012674	POLR1A	95	93.286	ENSECAG00000030510	-	95	94.118	Equus_caballus
ENSPVAG00000012674	POLR1A	95	93.286	ENSECAG00000010092	POLR1A	95	94.118	Equus_caballus
ENSPVAG00000012674	POLR1A	95	93.286	ENSECAG00000036306	-	95	94.118	Equus_caballus
ENSPVAG00000012674	POLR1A	85	95.745	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSPVAG00000012674	POLR1A	95	67.504	ENSELUG00000012769	polr1a	93	66.350	Esox_lucius
ENSPVAG00000012674	POLR1A	95	91.519	ENSFCAG00000008966	POLR1A	95	92.279	Felis_catus
ENSPVAG00000012674	POLR1A	94	70.796	ENSFALG00000010082	POLR1A	94	70.278	Ficedula_albicollis
ENSPVAG00000012674	POLR1A	95	88.070	ENSFDAG00000013726	POLR1A	95	88.686	Fukomys_damarensis
ENSPVAG00000012674	POLR1A	92	62.987	ENSFHEG00000005996	polr1a	94	62.537	Fundulus_heteroclitus
ENSPVAG00000012674	POLR1A	94	62.944	ENSGMOG00000002230	polr1a	97	62.528	Gadus_morhua
ENSPVAG00000012674	POLR1A	86	68.285	ENSGALG00000038160	-	93	68.452	Gallus_gallus
ENSPVAG00000012674	POLR1A	95	64.788	ENSGAFG00000015266	polr1a	95	64.275	Gambusia_affinis
ENSPVAG00000012674	POLR1A	95	64.528	ENSGACG00000018791	polr1a	95	64.254	Gasterosteus_aculeatus
ENSPVAG00000012674	POLR1A	85	73.289	ENSGAGG00000004984	-	93	72.754	Gopherus_agassizii
ENSPVAG00000012674	POLR1A	95	91.873	ENSGGOG00000001788	POLR1A	95	92.647	Gorilla_gorilla
ENSPVAG00000012674	POLR1A	81	68.326	ENSHBUG00000020021	polr1a	91	68.326	Haplochromis_burtoni
ENSPVAG00000012674	POLR1A	95	87.719	ENSHGLG00000006334	POLR1A	95	88.321	Heterocephalus_glaber_female
ENSPVAG00000012674	POLR1A	95	87.719	ENSHGLG00100006614	POLR1A	95	88.321	Heterocephalus_glaber_male
ENSPVAG00000012674	POLR1A	91	64.839	ENSHCOG00000003345	polr1a	93	64.770	Hippocampus_comes
ENSPVAG00000012674	POLR1A	95	66.642	ENSIPUG00000013174	polr1a	95	66.082	Ictalurus_punctatus
ENSPVAG00000012674	POLR1A	95	86.667	ENSSTOG00000012580	POLR1A	95	86.861	Ictidomys_tridecemlineatus
ENSPVAG00000012674	POLR1A	95	85.965	ENSJJAG00000013113	Polr1a	95	86.131	Jaculus_jaculus
ENSPVAG00000012674	POLR1A	95	65.733	ENSKMAG00000007399	polr1a	95	65.512	Kryptolebias_marmoratus
ENSPVAG00000012674	POLR1A	91	66.447	ENSLBEG00000015401	polr1a	95	65.791	Labrus_bergylta
ENSPVAG00000012674	POLR1A	95	69.305	ENSLOCG00000010881	polr1a	94	69.498	Lepisosteus_oculatus
ENSPVAG00000012674	POLR1A	95	86.755	ENSLAFG00000014948	POLR1A	95	86.387	Loxodonta_africana
ENSPVAG00000012674	POLR1A	95	91.166	ENSMFAG00000046097	POLR1A	95	91.912	Macaca_fascicularis
ENSPVAG00000012674	POLR1A	95	91.166	ENSMMUG00000015815	POLR1A	95	91.912	Macaca_mulatta
ENSPVAG00000012674	POLR1A	95	91.166	ENSMNEG00000043313	POLR1A	95	91.912	Macaca_nemestrina
ENSPVAG00000012674	POLR1A	95	91.166	ENSMLEG00000042428	POLR1A	95	91.912	Mandrillus_leucophaeus
ENSPVAG00000012674	POLR1A	95	65.055	ENSMAMG00000016565	polr1a	95	65.469	Mastacembelus_armatus
ENSPVAG00000012674	POLR1A	95	65.760	ENSMZEG00005004915	polr1a	95	65.568	Maylandia_zebra
ENSPVAG00000012674	POLR1A	95	68.235	ENSMGAG00000013111	POLR1A	95	68.382	Meleagris_gallopavo
ENSPVAG00000012674	POLR1A	87	85.872	ENSMAUG00000008497	Polr1a	94	85.725	Mesocricetus_auratus
ENSPVAG00000012674	POLR1A	95	90.459	ENSMICG00000000757	POLR1A	95	90.809	Microcebus_murinus
ENSPVAG00000012674	POLR1A	95	85.136	ENSMOCG00000000122	Polr1a	95	84.989	Microtus_ochrogaster
ENSPVAG00000012674	POLR1A	95	64.889	ENSMMOG00000010216	polr1a	94	64.741	Mola_mola
ENSPVAG00000012674	POLR1A	95	74.386	ENSMODG00000009335	POLR1A	75	80.275	Monodelphis_domestica
ENSPVAG00000012674	POLR1A	95	65.396	ENSMALG00000013363	polr1a	95	65.103	Monopterus_albus
ENSPVAG00000012674	POLR1A	95	83.885	MGP_CAROLIEiJ_G0028494	Polr1a	100	81.275	Mus_caroli
ENSPVAG00000012674	POLR1A	95	84.106	ENSMUSG00000049553	Polr1a	99	81.408	Mus_musculus
ENSPVAG00000012674	POLR1A	95	84.791	MGP_PahariEiJ_G0022230	Polr1a	100	82.470	Mus_pahari
ENSPVAG00000012674	POLR1A	95	82.192	MGP_SPRETEiJ_G0029499	Polr1a	100	82.205	Mus_spretus
ENSPVAG00000012674	POLR1A	95	92.933	ENSMPUG00000009135	POLR1A	95	93.382	Mustela_putorius_furo
ENSPVAG00000012674	POLR1A	95	88.699	ENSMLUG00000015723	POLR1A	95	89.247	Myotis_lucifugus
ENSPVAG00000012674	POLR1A	95	85.882	ENSNGAG00000017907	Polr1a	95	85.735	Nannospalax_galili
ENSPVAG00000012674	POLR1A	95	65.760	ENSNBRG00000000519	polr1a	95	65.714	Neolamprologus_brichardi
ENSPVAG00000012674	POLR1A	95	92.226	ENSNLEG00000002264	POLR1A	95	93.015	Nomascus_leucogenys
ENSPVAG00000012674	POLR1A	69	93.701	ENSMEUG00000011665	-	69	93.701	Notamacropus_eugenii
ENSPVAG00000012674	POLR1A	94	81.227	ENSOPRG00000008269	POLR1A	95	81.077	Ochotona_princeps
ENSPVAG00000012674	POLR1A	95	88.421	ENSODEG00000003542	POLR1A	95	89.051	Octodon_degus
ENSPVAG00000012674	POLR1A	95	66.127	ENSONIG00000015895	polr1a	94	66.127	Oreochromis_niloticus
ENSPVAG00000012674	POLR1A	95	89.753	ENSOCUG00000010138	POLR1A	95	90.074	Oryctolagus_cuniculus
ENSPVAG00000012674	POLR1A	95	64.623	ENSORLG00000008753	polr1a	94	63.962	Oryzias_latipes
ENSPVAG00000012674	POLR1A	95	63.959	ENSORLG00020020726	polr1a	95	63.932	Oryzias_latipes_hni
ENSPVAG00000012674	POLR1A	88	73.404	ENSORLG00015016071	polr1a	93	73.333	Oryzias_latipes_hsok
ENSPVAG00000012674	POLR1A	95	89.753	ENSOGAG00000004031	POLR1A	95	90.074	Otolemur_garnettii
ENSPVAG00000012674	POLR1A	95	88.421	ENSOARG00000020601	POLR1A	95	89.706	Ovis_aries
ENSPVAG00000012674	POLR1A	95	91.166	ENSPPAG00000042450	POLR1A	95	91.912	Pan_paniscus
ENSPVAG00000012674	POLR1A	95	91.519	ENSPPRG00000006702	POLR1A	95	92.279	Panthera_pardus
ENSPVAG00000012674	POLR1A	95	91.519	ENSPTIG00000018783	POLR1A	95	92.279	Panthera_tigris_altaica
ENSPVAG00000012674	POLR1A	95	91.166	ENSPTRG00000012147	POLR1A	95	91.912	Pan_troglodytes
ENSPVAG00000012674	POLR1A	95	91.166	ENSPANG00000025908	POLR1A	95	91.912	Papio_anubis
ENSPVAG00000012674	POLR1A	89	75.694	ENSPKIG00000005468	polr1a	92	75.694	Paramormyrops_kingsleyae
ENSPVAG00000012674	POLR1A	63	68.687	ENSPSIG00000009321	-	99	68.779	Pelodiscus_sinensis
ENSPVAG00000012674	POLR1A	95	86.207	ENSPEMG00000022224	Polr1a	95	86.380	Peromyscus_maniculatus_bairdii
ENSPVAG00000012674	POLR1A	90	76.784	ENSPCIG00000004222	POLR1A	93	76.586	Phascolarctos_cinereus
ENSPVAG00000012674	POLR1A	95	64.333	ENSPFOG00000005025	polr1a	95	63.425	Poecilia_formosa
ENSPVAG00000012674	POLR1A	95	64.528	ENSPLAG00000021389	polr1a	94	64.370	Poecilia_latipinna
ENSPVAG00000012674	POLR1A	92	64.191	ENSPMEG00000006463	polr1a	94	64.265	Poecilia_mexicana
ENSPVAG00000012674	POLR1A	95	64.702	ENSPREG00000002389	polr1a	95	64.307	Poecilia_reticulata
ENSPVAG00000012674	POLR1A	95	90.426	ENSPPYG00000012217	POLR1A	95	91.912	Pongo_abelii
ENSPVAG00000012674	POLR1A	85	100.000	ENSPCAG00000011582	POLR1A	85	100.000	Procavia_capensis
ENSPVAG00000012674	POLR1A	95	90.106	ENSPCOG00000026987	POLR1A	95	90.441	Propithecus_coquereli
ENSPVAG00000012674	POLR1A	95	65.760	ENSPNYG00000000026	polr1a	95	65.568	Pundamilia_nyererei
ENSPVAG00000012674	POLR1A	95	67.595	ENSPNAG00000019223	polr1a	95	67.032	Pygocentrus_nattereri
ENSPVAG00000012674	POLR1A	95	85.578	ENSRNOG00000009545	Polr1a	95	84.915	Rattus_norvegicus
ENSPVAG00000012674	POLR1A	95	90.459	ENSRBIG00000028335	POLR1A	95	91.176	Rhinopithecus_bieti
ENSPVAG00000012674	POLR1A	95	90.106	ENSRROG00000031473	POLR1A	95	90.809	Rhinopithecus_roxellana
ENSPVAG00000012674	POLR1A	90	38.307	YOR341W	RPA190	89	38.170	Saccharomyces_cerevisiae
ENSPVAG00000012674	POLR1A	95	89.046	ENSSBOG00000030262	POLR1A	95	89.706	Saimiri_boliviensis_boliviensis
ENSPVAG00000012674	POLR1A	95	73.622	ENSSHAG00000014739	POLR1A	95	73.622	Sarcophilus_harrisii
ENSPVAG00000012674	POLR1A	95	66.716	ENSSFOG00015019716	polr1a	95	66.691	Scleropages_formosus
ENSPVAG00000012674	POLR1A	95	65.563	ENSSMAG00000014342	polr1a	95	65.591	Scophthalmus_maximus
ENSPVAG00000012674	POLR1A	95	66.839	ENSSDUG00000014631	polr1a	95	66.520	Seriola_dumerili
ENSPVAG00000012674	POLR1A	94	66.741	ENSSLDG00000024095	polr1a	95	66.741	Seriola_lalandi_dorsalis
ENSPVAG00000012674	POLR1A	67	97.872	ENSSARG00000003136	-	67	97.872	Sorex_araneus
ENSPVAG00000012674	POLR1A	89	78.462	ENSSPUG00000004215	POLR1A	92	78.462	Sphenodon_punctatus
ENSPVAG00000012674	POLR1A	61	68.758	ENSSPAG00000016341	polr1a	91	67.722	Stegastes_partitus
ENSPVAG00000012674	POLR1A	78	89.474	ENSSSCG00000008226	POLR1A	93	90.146	Sus_scrofa
ENSPVAG00000012674	POLR1A	94	69.793	ENSTGUG00000010704	POLR1A	94	69.158	Taeniopygia_guttata
ENSPVAG00000012674	POLR1A	95	63.150	ENSTRUG00000002210	polr1a	95	62.656	Takifugu_rubripes
ENSPVAG00000012674	POLR1A	95	59.483	ENSTNIG00000010116	polr1a	94	59.114	Tetraodon_nigroviridis
ENSPVAG00000012674	POLR1A	71	93.805	ENSTBEG00000008646	POLR1A	71	93.805	Tupaia_belangeri
ENSPVAG00000012674	POLR1A	95	91.166	ENSTTRG00000008597	POLR1A	95	91.912	Tursiops_truncatus
ENSPVAG00000012674	POLR1A	69	88.429	ENSUAMG00000012158	-	94	87.753	Ursus_americanus
ENSPVAG00000012674	POLR1A	95	93.640	ENSUMAG00000006700	POLR1A	95	94.118	Ursus_maritimus
ENSPVAG00000012674	POLR1A	95	91.519	ENSVVUG00000001245	POLR1A	95	91.912	Vulpes_vulpes
ENSPVAG00000012674	POLR1A	95	66.570	ENSXETG00000001952	polr1a	94	68.738	Xenopus_tropicalis
ENSPVAG00000012674	POLR1A	95	64.745	ENSXMAG00000004032	polr1a	94	64.684	Xiphophorus_maculatus