EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012718 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 10472 bases
Position: chrGeneScaffold_3888:41193-51664
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000011994	KH_1	PF00013.29	1.7e-06	1	1
ENSPVAP00000011994	DEAD	PF00270.29	2.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012717	-	1698	-	ENSPVAP00000011994	565 (aa)	-	UPI00018B1FB2

Gene Model

Click here to download ENSPVAG00000012718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012718	-	68	33.588	ENSPVAG00000002640	DDX47	84	33.588
ENSPVAG00000012718	-	66	32.283	ENSPVAG00000002569	DDX59	63	32.308
ENSPVAG00000012718	-	72	33.971	ENSPVAG00000010462	DDX52	72	33.713
ENSPVAG00000012718	-	68	31.592	ENSPVAG00000015468	DDX49	80	31.592
ENSPVAG00000012718	-	68	32.041	ENSPVAG00000016297	EIF4A1	93	32.041
ENSPVAG00000012718	-	65	40.415	ENSPVAG00000014651	DDX3X	61	39.356
ENSPVAG00000012718	-	63	32.033	ENSPVAG00000003627	EIF4A3	86	32.033
ENSPVAG00000012718	-	63	32.303	ENSPVAG00000005421	DDX6	72	32.303
ENSPVAG00000012718	-	72	41.230	ENSPVAG00000009818	DDX23	52	41.043
ENSPVAG00000012718	-	68	38.987	ENSPVAG00000002448	DDX4	56	38.987
ENSPVAG00000012718	-	61	32.418	ENSPVAG00000015321	DDX55	59	32.692
ENSPVAG00000012718	-	78	44.144	ENSPVAG00000001932	DDX5	71	44.144
ENSPVAG00000012718	-	78	45.169	ENSPVAG00000010133	DDX17	60	44.889
ENSPVAG00000012718	-	99	72.566	ENSPVAG00000001484	-	89	72.920
ENSPVAG00000012718	-	75	35.648	ENSPVAG00000007784	DDX41	68	35.648
ENSPVAG00000012718	-	50	32.384	ENSPVAG00000013685	EIF4A2	69	32.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012718	-	99	88.673	ENSAMEG00000007851	-	87	88.673	Ailuropoda_melanoleuca
ENSPVAG00000012718	-	100	82.478	ENSBTAG00000021814	-	87	82.478	Bos_taurus
ENSPVAG00000012718	-	99	87.234	ENSCAFG00020010029	-	87	87.234	Canis_lupus_dingo
ENSPVAG00000012718	-	99	80.496	ENSCAFG00020002717	-	86	80.496	Canis_lupus_dingo
ENSPVAG00000012718	-	100	83.009	ENSCHIG00000017351	-	87	83.009	Capra_hircus
ENSPVAG00000012718	-	89	79.920	ENSCAPG00000004247	-	100	79.920	Cavia_aperea
ENSPVAG00000012718	-	99	87.943	ENSCPOG00000003991	-	87	87.943	Cavia_porcellus
ENSPVAG00000012718	-	99	80.214	ENSCLAG00000010261	-	86	80.319	Chinchilla_lanigera
ENSPVAG00000012718	-	70	84.211	ENSCHOG00000003450	-	70	84.211	Choloepus_hoffmanni
ENSPVAG00000012718	-	99	88.830	ENSCGRG00001001145	Ddx43	87	88.830	Cricetulus_griseus_chok1gshd
ENSPVAG00000012718	-	99	88.652	ENSCGRG00000010217	Ddx43	100	88.652	Cricetulus_griseus_crigri
ENSPVAG00000012718	-	100	89.046	ENSDNOG00000017589	-	87	89.046	Dasypus_novemcinctus
ENSPVAG00000012718	-	99	87.589	ENSDORG00000030010	Ddx43	87	87.589	Dipodomys_ordii
ENSPVAG00000012718	-	77	91.740	ENSETEG00000001887	-	68	91.740	Echinops_telfairi
ENSPVAG00000012718	-	99	92.895	ENSEASG00005004346	-	80	92.895	Equus_asinus_asinus
ENSPVAG00000012718	-	99	92.895	ENSECAG00000017971	DDX43	88	92.895	Equus_caballus
ENSPVAG00000012718	-	100	84.956	ENSFCAG00000031631	-	87	84.956	Felis_catus
ENSPVAG00000012718	-	99	85.106	ENSHGLG00000001118	-	100	85.106	Heterocephalus_glaber_female
ENSPVAG00000012718	-	99	85.106	ENSHGLG00100011895	-	88	85.106	Heterocephalus_glaber_male
ENSPVAG00000012718	-	99	77.128	ENSSTOG00000032538	-	100	77.128	Ictidomys_tridecemlineatus
ENSPVAG00000012718	-	99	86.525	ENSJJAG00000014184	Ddx43	87	86.525	Jaculus_jaculus
ENSPVAG00000012718	-	99	89.912	ENSLAFG00000012755	-	93	89.912	Loxodonta_africana
ENSPVAG00000012718	-	99	89.007	ENSMAUG00000001441	Ddx43	87	89.007	Mesocricetus_auratus
ENSPVAG00000012718	-	99	87.766	ENSMOCG00000012956	Ddx43	87	87.766	Microtus_ochrogaster
ENSPVAG00000012718	-	99	88.121	MGP_CAROLIEiJ_G0032467	Ddx43	87	88.121	Mus_caroli
ENSPVAG00000012718	-	99	88.475	ENSMUSG00000070291	Ddx43	87	88.475	Mus_musculus
ENSPVAG00000012718	-	89	89.109	MGP_PahariEiJ_G0015333	Ddx43	86	89.109	Mus_pahari
ENSPVAG00000012718	-	99	88.475	MGP_SPRETEiJ_G0033607	Ddx43	87	88.475	Mus_spretus
ENSPVAG00000012718	-	100	89.753	ENSMPUG00000004342	-	87	89.753	Mustela_putorius_furo
ENSPVAG00000012718	-	99	92.212	ENSMLUG00000017604	-	87	92.212	Myotis_lucifugus
ENSPVAG00000012718	-	99	87.589	ENSNGAG00000015102	Ddx43	87	87.589	Nannospalax_galili
ENSPVAG00000012718	-	86	87.500	ENSOPRG00000013523	-	86	87.500	Ochotona_princeps
ENSPVAG00000012718	-	96	84.037	ENSODEG00000016207	-	99	84.037	Octodon_degus
ENSPVAG00000012718	-	99	82.801	ENSOCUG00000006338	-	87	82.801	Oryctolagus_cuniculus
ENSPVAG00000012718	-	98	69.565	ENSOCUG00000025811	-	85	69.565	Oryctolagus_cuniculus
ENSPVAG00000012718	-	100	83.009	ENSOARG00000010873	-	87	83.009	Ovis_aries
ENSPVAG00000012718	-	100	84.956	ENSPTIG00000017842	-	87	84.956	Panthera_tigris_altaica
ENSPVAG00000012718	-	99	89.007	ENSPEMG00000023986	Ddx43	100	89.007	Peromyscus_maniculatus_bairdii
ENSPVAG00000012718	-	99	87.943	ENSPCAG00000005962	-	87	87.943	Procavia_capensis
ENSPVAG00000012718	-	99	88.298	ENSRNOG00000050868	Ddx43	87	88.298	Rattus_norvegicus
ENSPVAG00000012718	-	97	89.781	ENSSARG00000013493	-	100	89.781	Sorex_araneus
ENSPVAG00000012718	-	100	84.956	ENSSSCG00000004287	-	87	84.956	Sus_scrofa
ENSPVAG00000012718	-	100	76.283	ENSTTRG00000001488	-	99	76.283	Tursiops_truncatus
ENSPVAG00000012718	-	77	89.041	ENSUAMG00000012894	-	68	89.041	Ursus_americanus
ENSPVAG00000012718	-	100	88.693	ENSUMAG00000012291	-	87	88.693	Ursus_maritimus
ENSPVAG00000012718	-	93	77.609	ENSVPAG00000004969	-	86	77.609	Vicugna_pacos
ENSPVAG00000012718	-	99	87.234	ENSVVUG00000013908	-	87	87.234	Vulpes_vulpes