EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000012815 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 7379 bases
Position: chrGeneScaffold_513:35434-42812
Accession: 105306641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012084	RRM_1	PF00076.22	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012814	RBM42-201	1434	-	ENSPVAP00000012084	477 (aa)	XP_011380081	UPI00018B4092

Gene Model

Click here to download ENSPVAG00000012815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012815	RBM42	100	97.708	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPVAG00000012815	RBM42	100	98.121	ENSAMEG00000000524	RBM42	100	98.121	Ailuropoda_melanoleuca
ENSPVAG00000012815	RBM42	100	97.484	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPVAG00000012815	RBM42	100	97.904	ENSBTAG00000013440	RBM42	100	97.904	Bos_taurus
ENSPVAG00000012815	RBM42	100	96.436	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPVAG00000012815	RBM42	100	92.243	ENSCAFG00020018628	RBM42	100	96.739	Canis_lupus_dingo
ENSPVAG00000012815	RBM42	100	97.275	ENSCHIG00000009518	RBM42	100	97.275	Capra_hircus
ENSPVAG00000012815	RBM42	100	98.326	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPVAG00000012815	RBM42	81	97.409	ENSCAPG00000009566	RBM42	99	97.409	Cavia_aperea
ENSPVAG00000012815	RBM42	100	97.484	ENSCPOG00000012365	RBM42	99	97.484	Cavia_porcellus
ENSPVAG00000012815	RBM42	100	98.113	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPVAG00000012815	RBM42	100	97.500	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPVAG00000012815	RBM42	100	96.855	ENSCLAG00000012865	RBM42	99	96.855	Chinchilla_lanigera
ENSPVAG00000012815	RBM42	100	91.458	ENSCSAG00000004422	RBM42	100	91.458	Chlorocebus_sabaeus
ENSPVAG00000012815	RBM42	100	87.631	ENSCANG00000030272	RBM42	100	87.631	Colobus_angolensis_palliatus
ENSPVAG00000012815	RBM42	100	97.275	ENSCGRG00001018540	Rbm42	99	97.275	Cricetulus_griseus_chok1gshd
ENSPVAG00000012815	RBM42	100	97.083	ENSDNOG00000037397	RBM42	100	97.083	Dasypus_novemcinctus
ENSPVAG00000012815	RBM42	100	96.436	ENSDORG00000013001	Rbm42	99	96.436	Dipodomys_ordii
ENSPVAG00000012815	RBM42	71	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSPVAG00000012815	RBM42	100	92.243	ENSEASG00005001074	RBM42	100	92.243	Equus_asinus_asinus
ENSPVAG00000012815	RBM42	100	92.243	ENSECAG00000018215	RBM42	100	92.243	Equus_caballus
ENSPVAG00000012815	RBM42	100	98.742	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPVAG00000012815	RBM42	98	92.553	ENSFDAG00000007440	RBM42	99	94.154	Fukomys_damarensis
ENSPVAG00000012815	RBM42	100	97.708	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPVAG00000012815	RBM42	98	95.299	ENSHGLG00000008418	RBM42	99	95.388	Heterocephalus_glaber_female
ENSPVAG00000012815	RBM42	98	95.299	ENSHGLG00100018667	RBM42	99	95.388	Heterocephalus_glaber_male
ENSPVAG00000012815	RBM42	100	96.646	ENSSTOG00000013050	RBM42	100	96.646	Ictidomys_tridecemlineatus
ENSPVAG00000012815	RBM42	100	95.807	ENSJJAG00000010421	Rbm42	99	95.807	Jaculus_jaculus
ENSPVAG00000012815	RBM42	100	95.388	ENSLAFG00000014993	RBM42	99	95.388	Loxodonta_africana
ENSPVAG00000012815	RBM42	100	97.500	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPVAG00000012815	RBM42	100	97.500	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPVAG00000012815	RBM42	100	97.500	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPVAG00000012815	RBM42	100	97.500	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPVAG00000012815	RBM42	100	98.532	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPVAG00000012815	RBM42	100	97.065	ENSMOCG00000000405	Rbm42	99	97.065	Microtus_ochrogaster
ENSPVAG00000012815	RBM42	100	96.855	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.855	Mus_caroli
ENSPVAG00000012815	RBM42	100	96.855	ENSMUSG00000036733	Rbm42	99	96.855	Mus_musculus
ENSPVAG00000012815	RBM42	100	96.855	MGP_PahariEiJ_G0012770	Rbm42	99	96.855	Mus_pahari
ENSPVAG00000012815	RBM42	100	96.855	MGP_SPRETEiJ_G0030632	Rbm42	99	96.855	Mus_spretus
ENSPVAG00000012815	RBM42	100	92.872	ENSMPUG00000006288	RBM42	100	92.872	Mustela_putorius_furo
ENSPVAG00000012815	RBM42	100	98.113	ENSMLUG00000011334	RBM42	100	98.113	Myotis_lucifugus
ENSPVAG00000012815	RBM42	100	96.646	ENSNGAG00000019698	Rbm42	99	96.646	Nannospalax_galili
ENSPVAG00000012815	RBM42	70	98.198	ENSNLEG00000011272	-	94	91.061	Nomascus_leucogenys
ENSPVAG00000012815	RBM42	96	82.289	ENSMEUG00000016300	RBM42	100	81.893	Notamacropus_eugenii
ENSPVAG00000012815	RBM42	100	93.501	ENSOPRG00000001229	RBM42	100	91.614	Ochotona_princeps
ENSPVAG00000012815	RBM42	100	97.065	ENSODEG00000013705	RBM42	99	97.065	Octodon_degus
ENSPVAG00000012815	RBM42	100	91.042	ENSOCUG00000003337	RBM42	100	91.042	Oryctolagus_cuniculus
ENSPVAG00000012815	RBM42	100	96.855	ENSOGAG00000004144	RBM42	100	96.855	Otolemur_garnettii
ENSPVAG00000012815	RBM42	98	89.722	ENSOARG00000004926	RBM42	98	93.487	Ovis_aries
ENSPVAG00000012815	RBM42	100	98.113	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPVAG00000012815	RBM42	100	98.742	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPVAG00000012815	RBM42	100	98.323	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPVAG00000012815	RBM42	100	97.708	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPVAG00000012815	RBM42	100	97.065	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPVAG00000012815	RBM42	100	97.275	ENSPEMG00000012065	Rbm42	99	97.275	Peromyscus_maniculatus_bairdii
ENSPVAG00000012815	RBM42	100	96.701	ENSPPYG00000009871	RBM42	100	96.701	Pongo_abelii
ENSPVAG00000012815	RBM42	100	84.277	ENSPCAG00000013053	RBM42	100	82.600	Procavia_capensis
ENSPVAG00000012815	RBM42	100	98.952	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPVAG00000012815	RBM42	70	98.799	ENSPCOG00000020672	RBM42	81	98.799	Propithecus_coquereli
ENSPVAG00000012815	RBM42	100	97.065	ENSRNOG00000024278	Rbm42	99	97.065	Rattus_norvegicus
ENSPVAG00000012815	RBM42	100	97.500	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPVAG00000012815	RBM42	100	98.113	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPVAG00000012815	RBM42	85	98.276	ENSSBOG00000030666	RBM42	100	98.276	Saimiri_boliviensis_boliviensis
ENSPVAG00000012815	RBM42	98	67.373	ENSSHAG00000008876	RBM42	97	71.186	Sarcophilus_harrisii
ENSPVAG00000012815	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSPVAG00000012815	RBM42	100	97.065	ENSSSCG00000002905	RBM42	100	97.065	Sus_scrofa
ENSPVAG00000012815	RBM42	100	98.323	ENSUAMG00000020711	RBM42	100	98.323	Ursus_americanus
ENSPVAG00000012815	RBM42	100	98.323	ENSUMAG00000020223	RBM42	100	98.323	Ursus_maritimus
ENSPVAG00000012815	RBM42	100	97.065	ENSVVUG00000015117	RBM42	100	97.065	Vulpes_vulpes