EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000012837 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 10531 bases
Position: chrscaffold_9098:37058-47588
Accession: 4662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	1	6
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	2	6
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	3	6
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	4	6
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	5	6
ENSPVAP00000012108	zf-C2H2	PF00096.26	1.8e-33	6	6
ENSPVAP00000012108	zf-met	PF12874.7	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000012839	GTF3A-201	1266	-	ENSPVAP00000012108	421 (aa)	-	UPI00018B170A

Gene Model

Click here to download ENSPVAG00000012837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000012837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000012837	GTF3A	63	35.000	ENSPVAG00000004394	ZNF112	65	35.000
ENSPVAG00000012837	GTF3A	70	32.576	ENSPVAG00000001626	-	74	35.514
ENSPVAG00000012837	GTF3A	66	31.164	ENSPVAG00000000361	-	79	31.164
ENSPVAG00000012837	GTF3A	63	34.962	ENSPVAG00000009430	-	50	34.340
ENSPVAG00000012837	GTF3A	63	34.340	ENSPVAG00000009433	-	70	34.340
ENSPVAG00000012837	GTF3A	62	33.166	ENSPVAG00000012830	-	73	33.333
ENSPVAG00000012837	GTF3A	60	35.043	ENSPVAG00000009457	SNAI2	50	35.043
ENSPVAG00000012837	GTF3A	62	32.500	ENSPVAG00000002257	-	74	32.353
ENSPVAG00000012837	GTF3A	65	37.778	ENSPVAG00000006095	ZNF2	58	32.031
ENSPVAG00000012837	GTF3A	67	37.324	ENSPVAG00000004392	ZNF235	56	37.324
ENSPVAG00000012837	GTF3A	64	36.301	ENSPVAG00000001094	-	88	36.301
ENSPVAG00000012837	GTF3A	64	31.365	ENSPVAG00000010053	ZFP69B	58	31.343
ENSPVAG00000012837	GTF3A	64	39.759	ENSPVAG00000010064	ZNF768	54	39.759
ENSPVAG00000012837	GTF3A	73	35.065	ENSPVAG00000015576	ZNF234	80	36.683
ENSPVAG00000012837	GTF3A	64	37.584	ENSPVAG00000005467	ZNF81	64	36.842
ENSPVAG00000012837	GTF3A	63	30.594	ENSPVAG00000000908	ZNF550	52	30.594
ENSPVAG00000012837	GTF3A	64	30.038	ENSPVAG00000015563	-	86	30.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000012837	GTF3A	86	81.267	ENSAMEG00000015824	GTF3A	100	81.267	Ailuropoda_melanoleuca
ENSPVAG00000012837	GTF3A	84	79.718	ENSBTAG00000012600	GTF3A	99	79.718	Bos_taurus
ENSPVAG00000012837	GTF3A	83	82.286	ENSCAFG00000006794	GTF3A	96	82.286	Canis_familiaris
ENSPVAG00000012837	GTF3A	94	73.464	ENSCHIG00000021040	-	96	73.464	Capra_hircus
ENSPVAG00000012837	GTF3A	84	79.155	ENSCHIG00000010341	-	99	79.155	Capra_hircus
ENSPVAG00000012837	GTF3A	80	79.822	ENSTSYG00000004206	GTF3A	99	79.819	Carlito_syrichta
ENSPVAG00000012837	GTF3A	70	83.142	ENSCAPG00000015862	GTF3A	98	79.845	Cavia_aperea
ENSPVAG00000012837	GTF3A	74	81.847	ENSCPOG00000010143	GTF3A	98	82.484	Cavia_porcellus
ENSPVAG00000012837	GTF3A	73	82.958	ENSCLAG00000003912	GTF3A	95	83.923	Chinchilla_lanigera
ENSPVAG00000012837	GTF3A	90	76.702	ENSDNOG00000037405	-	90	76.702	Dasypus_novemcinctus
ENSPVAG00000012837	GTF3A	89	74.138	ENSETEG00000003225	GTF3A	81	74.138	Echinops_telfairi
ENSPVAG00000012837	GTF3A	91	77.461	ENSEASG00005022495	-	91	74.817	Equus_asinus_asinus
ENSPVAG00000012837	GTF3A	77	73.231	ENSEASG00005013216	-	86	73.231	Equus_asinus_asinus
ENSPVAG00000012837	GTF3A	81	77.419	ENSECAG00000024825	-	79	77.419	Equus_caballus
ENSPVAG00000012837	GTF3A	87	81.471	ENSECAG00000014803	GTF3A	86	81.879	Equus_caballus
ENSPVAG00000012837	GTF3A	87	78.533	ENSEEUG00000004307	GTF3A	95	76.804	Erinaceus_europaeus
ENSPVAG00000012837	GTF3A	99	72.600	ENSFCAG00000006982	GTF3A	95	73.923	Felis_catus
ENSPVAG00000012837	GTF3A	73	82.315	ENSFDAG00000016841	GTF3A	96	82.315	Fukomys_damarensis
ENSPVAG00000012837	GTF3A	74	83.333	ENSHGLG00000004173	GTF3A	97	83.333	Heterocephalus_glaber_female
ENSPVAG00000012837	GTF3A	74	83.333	ENSHGLG00100011561	GTF3A	97	83.333	Heterocephalus_glaber_male
ENSPVAG00000012837	GTF3A	74	84.295	ENSSTOG00000013853	GTF3A	99	84.615	Ictidomys_tridecemlineatus
ENSPVAG00000012837	GTF3A	78	75.405	ENSJJAG00000011501	Gtf3a	99	75.405	Jaculus_jaculus
ENSPVAG00000012837	GTF3A	86	74.865	ENSLAFG00000027315	GTF3A	100	74.324	Loxodonta_africana
ENSPVAG00000012837	GTF3A	79	80.000	ENSMAUG00000016253	Gtf3a	93	78.488	Mesocricetus_auratus
ENSPVAG00000012837	GTF3A	86	78.474	ENSMICG00000014763	GTF3A	99	80.109	Microcebus_murinus
ENSPVAG00000012837	GTF3A	81	79.706	MGP_CAROLIEiJ_G0028031	Gtf3a	99	75.414	Mus_caroli
ENSPVAG00000012837	GTF3A	81	79.706	ENSMUSG00000016503	Gtf3a	93	79.706	Mus_musculus
ENSPVAG00000012837	GTF3A	79	80.645	MGP_PahariEiJ_G0024597	Gtf3a	99	75.275	Mus_pahari
ENSPVAG00000012837	GTF3A	85	76.111	MGP_SPRETEiJ_G0029029	Gtf3a	99	76.111	Mus_spretus
ENSPVAG00000012837	GTF3A	86	80.548	ENSMPUG00000005835	GTF3A	99	80.548	Mustela_putorius_furo
ENSPVAG00000012837	GTF3A	78	83.636	ENSMLUG00000002158	GTF3A	99	85.152	Myotis_lucifugus
ENSPVAG00000012837	GTF3A	86	80.822	ENSNLEG00000000331	GTF3A	100	81.644	Nomascus_leucogenys
ENSPVAG00000012837	GTF3A	78	56.061	ENSMEUG00000010089	GTF3A	96	56.061	Notamacropus_eugenii
ENSPVAG00000012837	GTF3A	87	70.845	ENSOPRG00000000854	-	95	70.079	Ochotona_princeps
ENSPVAG00000012837	GTF3A	85	78.273	ENSODEG00000006725	GTF3A	85	78.830	Octodon_degus
ENSPVAG00000012837	GTF3A	87	79.508	ENSOCUG00000011713	GTF3A	89	76.154	Oryctolagus_cuniculus
ENSPVAG00000012837	GTF3A	86	77.596	ENSOGAG00000014589	GTF3A	100	79.235	Otolemur_garnettii
ENSPVAG00000012837	GTF3A	86	73.889	ENSOARG00000012551	GTF3A	99	73.889	Ovis_aries
ENSPVAG00000012837	GTF3A	86	81.543	ENSPPRG00000002368	GTF3A	100	81.543	Panthera_pardus
ENSPVAG00000012837	GTF3A	78	80.537	ENSPTIG00000018958	GTF3A	82	80.537	Panthera_tigris_altaica
ENSPVAG00000012837	GTF3A	78	50.376	ENSPSIG00000011722	GTF3A	99	50.376	Pelodiscus_sinensis
ENSPVAG00000012837	GTF3A	84	80.447	ENSPPYG00000005235	GTF3A	99	81.006	Pongo_abelii
ENSPVAG00000012837	GTF3A	87	76.819	ENSPCOG00000016742	GTF3A	93	73.659	Propithecus_coquereli
ENSPVAG00000012837	GTF3A	86	73.425	ENSRROG00000043264	GTF3A	100	73.973	Rhinopithecus_roxellana
ENSPVAG00000012837	GTF3A	78	73.860	ENSSHAG00000016965	GTF3A	93	73.860	Sarcophilus_harrisii
ENSPVAG00000012837	GTF3A	87	67.647	ENSSARG00000010692	GTF3A	94	69.972	Sorex_araneus
ENSPVAG00000012837	GTF3A	78	65.957	ENSSPUG00000005307	GTF3A	97	62.740	Sphenodon_punctatus
ENSPVAG00000012837	GTF3A	71	44.000	ENSTRUG00000005241	gtf3ab	87	43.934	Takifugu_rubripes
ENSPVAG00000012837	GTF3A	68	83.984	ENSTBEG00000012075	GTF3A	61	83.984	Tupaia_belangeri
ENSPVAG00000012837	GTF3A	96	69.383	ENSTTRG00000008538	GTF3A	96	69.383	Tursiops_truncatus
ENSPVAG00000012837	GTF3A	86	80.716	ENSUAMG00000019189	GTF3A	100	82.094	Ursus_americanus
ENSPVAG00000012837	GTF3A	79	79.762	ENSUMAG00000016941	GTF3A	99	83.333	Ursus_maritimus
ENSPVAG00000012837	GTF3A	77	80.405	ENSVPAG00000004995	GTF3A	99	80.405	Vicugna_pacos
ENSPVAG00000012837	GTF3A	86	80.441	ENSVVUG00000009197	GTF3A	100	80.441	Vulpes_vulpes