EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000013104 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 1793 bases
Position: chrGeneScaffold_3087:126797-128589
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012358	PseudoU_synth_2	PF00849.22	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000013104	RPUSD1-201	930	-	ENSPVAP00000012358	309 (aa)	-	UPI00018B2313

Gene Model

Click here to download ENSPVAG00000013104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000013104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000013104	RPUSD1	100	83.974	ENSG00000007376	RPUSD1	98	88.415	Homo_sapiens
ENSPVAG00000013104	RPUSD1	98	52.597	ENSAPOG00000022221	rpusd1	98	52.273	Acanthochromis_polyacanthus
ENSPVAG00000013104	RPUSD1	100	81.410	ENSAMEG00000007461	RPUSD1	100	81.090	Ailuropoda_melanoleuca
ENSPVAG00000013104	RPUSD1	98	54.248	ENSACIG00000015863	rpusd1	98	53.896	Amphilophus_citrinellus
ENSPVAG00000013104	RPUSD1	98	52.131	ENSAOCG00000021975	rpusd1	95	52.131	Amphiprion_ocellaris
ENSPVAG00000013104	RPUSD1	98	52.459	ENSAPEG00000001316	rpusd1	95	52.459	Amphiprion_percula
ENSPVAG00000013104	RPUSD1	76	63.180	ENSATEG00000002984	rpusd1	98	53.871	Anabas_testudineus
ENSPVAG00000013104	RPUSD1	78	57.085	ENSAPLG00000012316	RPUSD1	99	57.085	Anas_platyrhynchos
ENSPVAG00000013104	RPUSD1	99	63.871	ENSACAG00000008953	RPUSD1	100	62.739	Anolis_carolinensis
ENSPVAG00000013104	RPUSD1	100	84.295	ENSANAG00000024709	RPUSD1	100	84.295	Aotus_nancymaae
ENSPVAG00000013104	RPUSD1	98	54.072	ENSACLG00000013692	rpusd1	98	54.072	Astatotilapia_calliptera
ENSPVAG00000013104	RPUSD1	99	55.663	ENSAMXG00000019802	rpusd1	100	55.987	Astyanax_mexicanus
ENSPVAG00000013104	RPUSD1	100	85.256	ENSBTAG00000000179	RPUSD1	100	83.974	Bos_taurus
ENSPVAG00000013104	RPUSD1	100	84.295	ENSCJAG00000012253	RPUSD1	100	84.295	Callithrix_jacchus
ENSPVAG00000013104	RPUSD1	100	82.051	ENSCAFG00000019614	RPUSD1	100	83.013	Canis_familiaris
ENSPVAG00000013104	RPUSD1	100	82.051	ENSCAFG00020008891	RPUSD1	100	83.013	Canis_lupus_dingo
ENSPVAG00000013104	RPUSD1	100	83.974	ENSCHIG00000012872	RPUSD1	100	83.974	Capra_hircus
ENSPVAG00000013104	RPUSD1	100	80.128	ENSTSYG00000036934	RPUSD1	100	77.044	Carlito_syrichta
ENSPVAG00000013104	RPUSD1	100	83.013	ENSCAPG00000014219	RPUSD1	100	82.372	Cavia_aperea
ENSPVAG00000013104	RPUSD1	100	83.013	ENSCPOG00000034604	RPUSD1	100	82.372	Cavia_porcellus
ENSPVAG00000013104	RPUSD1	100	84.615	ENSCCAG00000034385	RPUSD1	100	84.615	Cebus_capucinus
ENSPVAG00000013104	RPUSD1	100	84.936	ENSCATG00000042983	RPUSD1	100	84.936	Cercocebus_atys
ENSPVAG00000013104	RPUSD1	100	81.090	ENSCLAG00000013966	RPUSD1	100	81.090	Chinchilla_lanigera
ENSPVAG00000013104	RPUSD1	100	84.936	ENSCSAG00000012121	RPUSD1	100	84.936	Chlorocebus_sabaeus
ENSPVAG00000013104	RPUSD1	99	62.987	ENSCPBG00000021101	RPUSD1	99	61.635	Chrysemys_picta_bellii
ENSPVAG00000013104	RPUSD1	90	85.053	ENSCANG00000028576	RPUSD1	98	84.783	Colobus_angolensis_palliatus
ENSPVAG00000013104	RPUSD1	100	81.410	ENSCGRG00001014253	Rpusd1	100	79.808	Cricetulus_griseus_chok1gshd
ENSPVAG00000013104	RPUSD1	100	81.410	ENSCGRG00000017995	Rpusd1	100	79.808	Cricetulus_griseus_crigri
ENSPVAG00000013104	RPUSD1	99	52.244	ENSCSEG00000018512	rpusd1	100	52.244	Cynoglossus_semilaevis
ENSPVAG00000013104	RPUSD1	98	53.420	ENSCVAG00000022746	rpusd1	98	51.603	Cyprinodon_variegatus
ENSPVAG00000013104	RPUSD1	99	56.958	ENSDARG00000060192	rpusd1	100	56.731	Danio_rerio
ENSPVAG00000013104	RPUSD1	100	83.013	ENSDNOG00000003721	RPUSD1	100	83.013	Dasypus_novemcinctus
ENSPVAG00000013104	RPUSD1	100	83.013	ENSDORG00000026656	Rpusd1	100	83.654	Dipodomys_ordii
ENSPVAG00000013104	RPUSD1	99	42.945	ENSEBUG00000008767	rpusd1	94	43.077	Eptatretus_burgeri
ENSPVAG00000013104	RPUSD1	100	83.861	ENSEASG00005018421	RPUSD1	76	85.127	Equus_asinus_asinus
ENSPVAG00000013104	RPUSD1	81	55.906	ENSELUG00000014307	rpusd1	88	50.485	Esox_lucius
ENSPVAG00000013104	RPUSD1	100	82.372	ENSFCAG00000010359	RPUSD1	100	82.109	Felis_catus
ENSPVAG00000013104	RPUSD1	99	63.107	ENSFALG00000003211	RPUSD1	100	62.460	Ficedula_albicollis
ENSPVAG00000013104	RPUSD1	100	82.372	ENSFDAG00000013398	RPUSD1	100	81.410	Fukomys_damarensis
ENSPVAG00000013104	RPUSD1	98	51.475	ENSFHEG00000004736	rpusd1	98	52.614	Fundulus_heteroclitus
ENSPVAG00000013104	RPUSD1	81	58.893	ENSGMOG00000010756	rpusd1	98	52.769	Gadus_morhua
ENSPVAG00000013104	RPUSD1	99	62.581	ENSGALG00000005315	RPUSD1	100	62.460	Gallus_gallus
ENSPVAG00000013104	RPUSD1	98	53.268	ENSGAFG00000009886	rpusd1	98	52.564	Gambusia_affinis
ENSPVAG00000013104	RPUSD1	97	53.135	ENSGACG00000014276	rpusd1	97	53.135	Gasterosteus_aculeatus
ENSPVAG00000013104	RPUSD1	99	63.312	ENSGAGG00000004181	RPUSD1	99	61.635	Gopherus_agassizii
ENSPVAG00000013104	RPUSD1	100	83.654	ENSGGOG00000013997	RPUSD1	100	83.654	Gorilla_gorilla
ENSPVAG00000013104	RPUSD1	98	53.746	ENSHBUG00000023728	rpusd1	98	53.746	Haplochromis_burtoni
ENSPVAG00000013104	RPUSD1	100	80.769	ENSHGLG00000002595	RPUSD1	100	81.090	Heterocephalus_glaber_female
ENSPVAG00000013104	RPUSD1	100	80.769	ENSHGLG00100014303	RPUSD1	100	81.090	Heterocephalus_glaber_male
ENSPVAG00000013104	RPUSD1	98	53.922	ENSHCOG00000002390	rpusd1	99	53.922	Hippocampus_comes
ENSPVAG00000013104	RPUSD1	99	57.419	ENSIPUG00000001570	rpusd1	99	57.419	Ictalurus_punctatus
ENSPVAG00000013104	RPUSD1	100	84.615	ENSSTOG00000004276	RPUSD1	100	83.974	Ictidomys_tridecemlineatus
ENSPVAG00000013104	RPUSD1	100	82.692	ENSJJAG00000015696	Rpusd1	100	82.051	Jaculus_jaculus
ENSPVAG00000013104	RPUSD1	98	51.803	ENSKMAG00000017287	rpusd1	98	52.288	Kryptolebias_marmoratus
ENSPVAG00000013104	RPUSD1	98	53.115	ENSLBEG00000022502	rpusd1	98	53.115	Labrus_bergylta
ENSPVAG00000013104	RPUSD1	98	53.115	ENSLBEG00000013354	RPUSD1	98	53.115	Labrus_bergylta
ENSPVAG00000013104	RPUSD1	99	57.556	ENSLACG00000008869	RPUSD1	99	58.442	Latimeria_chalumnae
ENSPVAG00000013104	RPUSD1	69	69.585	ENSLOCG00000005682	rpusd1	99	69.585	Lepisosteus_oculatus
ENSPVAG00000013104	RPUSD1	100	78.205	ENSLAFG00000002115	RPUSD1	100	77.885	Loxodonta_africana
ENSPVAG00000013104	RPUSD1	100	85.256	ENSMFAG00000003961	RPUSD1	100	85.256	Macaca_fascicularis
ENSPVAG00000013104	RPUSD1	100	85.256	ENSMMUG00000000842	RPUSD1	100	85.256	Macaca_mulatta
ENSPVAG00000013104	RPUSD1	100	85.256	ENSMNEG00000042712	RPUSD1	100	85.256	Macaca_nemestrina
ENSPVAG00000013104	RPUSD1	100	85.256	ENSMLEG00000030591	RPUSD1	100	85.256	Mandrillus_leucophaeus
ENSPVAG00000013104	RPUSD1	81	60.079	ENSMAMG00000004735	rpusd1	98	53.420	Mastacembelus_armatus
ENSPVAG00000013104	RPUSD1	98	54.072	ENSMZEG00005003214	rpusd1	98	54.072	Maylandia_zebra
ENSPVAG00000013104	RPUSD1	97	61.639	ENSMGAG00000005447	RPUSD1	99	61.513	Meleagris_gallopavo
ENSPVAG00000013104	RPUSD1	84	80.385	ENSMAUG00000019998	Rpusd1	100	80.385	Mesocricetus_auratus
ENSPVAG00000013104	RPUSD1	100	85.256	ENSMICG00000017561	RPUSD1	100	85.256	Microcebus_murinus
ENSPVAG00000013104	RPUSD1	100	81.731	ENSMOCG00000014082	Rpusd1	100	81.410	Microtus_ochrogaster
ENSPVAG00000013104	RPUSD1	78	60.000	ENSMMOG00000012569	rpusd1	99	51.961	Mola_mola
ENSPVAG00000013104	RPUSD1	100	65.506	ENSMODG00000016882	RPUSD1	100	65.190	Monodelphis_domestica
ENSPVAG00000013104	RPUSD1	98	54.545	ENSMALG00000017818	rpusd1	98	54.221	Monopterus_albus
ENSPVAG00000013104	RPUSD1	100	83.013	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.692	Mus_caroli
ENSPVAG00000013104	RPUSD1	100	83.333	ENSMUSG00000041199	Rpusd1	100	83.013	Mus_musculus
ENSPVAG00000013104	RPUSD1	100	81.210	MGP_PahariEiJ_G0023562	Rpusd1	100	81.210	Mus_pahari
ENSPVAG00000013104	RPUSD1	100	83.333	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.013	Mus_spretus
ENSPVAG00000013104	RPUSD1	100	80.449	ENSMPUG00000015897	RPUSD1	100	80.769	Mustela_putorius_furo
ENSPVAG00000013104	RPUSD1	100	86.218	ENSMLUG00000001089	RPUSD1	100	86.218	Myotis_lucifugus
ENSPVAG00000013104	RPUSD1	100	82.692	ENSNGAG00000003595	Rpusd1	100	82.051	Nannospalax_galili
ENSPVAG00000013104	RPUSD1	79	60.729	ENSNBRG00000006457	rpusd1	98	54.248	Neolamprologus_brichardi
ENSPVAG00000013104	RPUSD1	56	78.857	ENSNLEG00000008424	-	100	78.857	Nomascus_leucogenys
ENSPVAG00000013104	RPUSD1	100	68.269	ENSMEUG00000016049	RPUSD1	100	67.308	Notamacropus_eugenii
ENSPVAG00000013104	RPUSD1	99	73.871	ENSOPRG00000008340	RPUSD1	99	73.548	Ochotona_princeps
ENSPVAG00000013104	RPUSD1	100	79.808	ENSODEG00000016945	RPUSD1	100	79.487	Octodon_degus
ENSPVAG00000013104	RPUSD1	98	53.094	ENSONIG00000015672	rpusd1	99	53.094	Oreochromis_niloticus
ENSPVAG00000013104	RPUSD1	99	53.571	ENSORLG00000013009	rpusd1	99	53.571	Oryzias_latipes
ENSPVAG00000013104	RPUSD1	99	53.247	ENSORLG00020010382	rpusd1	99	53.247	Oryzias_latipes_hni
ENSPVAG00000013104	RPUSD1	99	52.597	ENSORLG00015021354	rpusd1	99	52.597	Oryzias_latipes_hsok
ENSPVAG00000013104	RPUSD1	98	54.098	ENSOMEG00000021426	rpusd1	98	53.443	Oryzias_melastigma
ENSPVAG00000013104	RPUSD1	100	86.859	ENSOGAG00000003795	RPUSD1	100	86.859	Otolemur_garnettii
ENSPVAG00000013104	RPUSD1	100	85.577	ENSOARG00000014254	RPUSD1	100	84.295	Ovis_aries
ENSPVAG00000013104	RPUSD1	100	83.654	ENSPPAG00000034797	RPUSD1	100	83.654	Pan_paniscus
ENSPVAG00000013104	RPUSD1	100	82.372	ENSPPRG00000012389	RPUSD1	100	81.789	Panthera_pardus
ENSPVAG00000013104	RPUSD1	100	82.051	ENSPTIG00000008545	RPUSD1	92	81.470	Panthera_tigris_altaica
ENSPVAG00000013104	RPUSD1	100	83.654	ENSPTRG00000007565	RPUSD1	100	83.654	Pan_troglodytes
ENSPVAG00000013104	RPUSD1	100	84.615	ENSPANG00000024401	RPUSD1	100	84.615	Papio_anubis
ENSPVAG00000013104	RPUSD1	99	57.827	ENSPKIG00000018890	rpusd1	91	57.556	Paramormyrops_kingsleyae
ENSPVAG00000013104	RPUSD1	99	65.372	ENSPSIG00000013945	RPUSD1	100	65.372	Pelodiscus_sinensis
ENSPVAG00000013104	RPUSD1	98	53.922	ENSPMGG00000014950	rpusd1	98	53.922	Periophthalmus_magnuspinnatus
ENSPVAG00000013104	RPUSD1	100	81.731	ENSPEMG00000000497	Rpusd1	100	82.051	Peromyscus_maniculatus_bairdii
ENSPVAG00000013104	RPUSD1	98	48.867	ENSPMAG00000001563	rpusd1	84	54.615	Petromyzon_marinus
ENSPVAG00000013104	RPUSD1	100	67.093	ENSPCIG00000021216	-	94	66.667	Phascolarctos_cinereus
ENSPVAG00000013104	RPUSD1	98	54.754	ENSPFOG00000007946	rpusd1	98	54.426	Poecilia_formosa
ENSPVAG00000013104	RPUSD1	98	54.754	ENSPLAG00000011925	rpusd1	98	54.426	Poecilia_latipinna
ENSPVAG00000013104	RPUSD1	98	54.098	ENSPMEG00000002910	rpusd1	98	53.770	Poecilia_mexicana
ENSPVAG00000013104	RPUSD1	98	53.922	ENSPREG00000019851	rpusd1	98	52.787	Poecilia_reticulata
ENSPVAG00000013104	RPUSD1	100	66.773	ENSPCAG00000002258	RPUSD1	100	66.773	Procavia_capensis
ENSPVAG00000013104	RPUSD1	100	85.256	ENSPCOG00000022582	RPUSD1	100	85.256	Propithecus_coquereli
ENSPVAG00000013104	RPUSD1	98	53.746	ENSPNYG00000024076	rpusd1	98	54.426	Pundamilia_nyererei
ENSPVAG00000013104	RPUSD1	98	55.556	ENSPNAG00000013806	rpusd1	100	55.016	Pygocentrus_nattereri
ENSPVAG00000013104	RPUSD1	100	82.372	ENSRNOG00000023639	Rpusd1	100	82.051	Rattus_norvegicus
ENSPVAG00000013104	RPUSD1	100	84.936	ENSRBIG00000030238	RPUSD1	100	84.936	Rhinopithecus_bieti
ENSPVAG00000013104	RPUSD1	100	84.936	ENSRROG00000036663	RPUSD1	100	84.936	Rhinopithecus_roxellana
ENSPVAG00000013104	RPUSD1	100	80.449	ENSSBOG00000033063	RPUSD1	100	81.410	Saimiri_boliviensis_boliviensis
ENSPVAG00000013104	RPUSD1	100	65.815	ENSSHAG00000013500	RPUSD1	100	65.385	Sarcophilus_harrisii
ENSPVAG00000013104	RPUSD1	99	58.065	ENSSFOG00015014394	rpusd1	99	57.742	Scleropages_formosus
ENSPVAG00000013104	RPUSD1	98	52.787	ENSSMAG00000008045	rpusd1	91	52.787	Scophthalmus_maximus
ENSPVAG00000013104	RPUSD1	81	61.660	ENSSDUG00000001829	rpusd1	95	54.754	Seriola_dumerili
ENSPVAG00000013104	RPUSD1	81	61.660	ENSSLDG00000020853	rpusd1	95	54.754	Seriola_lalandi_dorsalis
ENSPVAG00000013104	RPUSD1	53	81.928	ENSSARG00000011187	-	100	81.928	Sorex_araneus
ENSPVAG00000013104	RPUSD1	63	48.990	ENSSPUG00000005119	-	100	48.485	Sphenodon_punctatus
ENSPVAG00000013104	RPUSD1	98	53.770	ENSSPAG00000012708	rpusd1	98	53.770	Stegastes_partitus
ENSPVAG00000013104	RPUSD1	100	85.256	ENSSSCG00000008000	RPUSD1	100	85.256	Sus_scrofa
ENSPVAG00000013104	RPUSD1	82	69.804	ENSTGUG00000015375	RPUSD1	100	69.804	Taeniopygia_guttata
ENSPVAG00000013104	RPUSD1	98	52.288	ENSTRUG00000003041	rpusd1	98	52.751	Takifugu_rubripes
ENSPVAG00000013104	RPUSD1	98	49.673	ENSTNIG00000002660	rpusd1	99	49.673	Tetraodon_nigroviridis
ENSPVAG00000013104	RPUSD1	100	87.500	ENSTTRG00000010167	RPUSD1	100	87.500	Tursiops_truncatus
ENSPVAG00000013104	RPUSD1	100	80.769	ENSUAMG00000012736	RPUSD1	100	81.731	Ursus_americanus
ENSPVAG00000013104	RPUSD1	100	80.769	ENSUMAG00000021174	RPUSD1	100	81.731	Ursus_maritimus
ENSPVAG00000013104	RPUSD1	100	81.410	ENSVVUG00000012357	RPUSD1	100	80.831	Vulpes_vulpes
ENSPVAG00000013104	RPUSD1	100	58.333	ENSXETG00000007184	rpusd1	100	57.729	Xenopus_tropicalis
ENSPVAG00000013104	RPUSD1	98	52.941	ENSXCOG00000017930	rpusd1	96	60.156	Xiphophorus_couchianus
ENSPVAG00000013104	RPUSD1	98	53.595	ENSXMAG00000024084	rpusd1	98	53.268	Xiphophorus_maculatus