EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000013467 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 338557 bases
Position: chrGeneScaffold_397:11976-350532
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012705	Fox-1_C	PF12414.8	3.5e-32	1	1
ENSPVAP00000012705	RRM_1	PF00076.22	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000013469	RBFOX1-201	1257	-	ENSPVAP00000012705	418 (aa)	-	UPI00018B421C

Gene Model

Click here to download ENSPVAG00000013467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000013467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000013467	RBFOX1	62	56.475	ENSPVAG00000015844	RBFOX2	66	56.475
ENSPVAG00000013467	RBFOX1	78	48.794	ENSPVAG00000015243	RBFOX3	100	50.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000013467	RBFOX1	100	94.019	ENSG00000078328	RBFOX1	100	94.019	Homo_sapiens
ENSPVAG00000013467	RBFOX1	97	69.504	ENSAPOG00000003197	rbfox1	98	70.416	Acanthochromis_polyacanthus
ENSPVAG00000013467	RBFOX1	60	93.600	ENSAMEG00000008605	RBFOX1	100	93.600	Ailuropoda_melanoleuca
ENSPVAG00000013467	RBFOX1	69	58.307	ENSACIG00000005478	rbfox1	73	58.307	Amphilophus_citrinellus
ENSPVAG00000013467	RBFOX1	69	69.707	ENSAOCG00000008283	rbfox1	96	69.381	Amphiprion_ocellaris
ENSPVAG00000013467	RBFOX1	90	67.632	ENSAPEG00000010636	rbfox1	100	67.277	Amphiprion_percula
ENSPVAG00000013467	RBFOX1	73	66.358	ENSATEG00000007513	rbfox1	97	67.524	Anabas_testudineus
ENSPVAG00000013467	RBFOX1	94	88.010	ENSAPLG00000013263	RBFOX1	98	88.010	Anas_platyrhynchos
ENSPVAG00000013467	RBFOX1	93	81.679	ENSACAG00000004013	RBFOX1	98	81.679	Anolis_carolinensis
ENSPVAG00000013467	RBFOX1	93	94.359	ENSANAG00000029527	RBFOX1	98	94.359	Aotus_nancymaae
ENSPVAG00000013467	RBFOX1	55	84.649	ENSAMXG00000002431	rbfox1	72	77.470	Astyanax_mexicanus
ENSPVAG00000013467	RBFOX1	93	94.359	ENSBTAG00000007210	RBFOX1	98	94.359	Bos_taurus
ENSPVAG00000013467	RBFOX1	100	94.019	ENSCJAG00000017351	RBFOX1	100	94.019	Callithrix_jacchus
ENSPVAG00000013467	RBFOX1	100	94.737	ENSCAFG00000019082	RBFOX1	100	94.737	Canis_familiaris
ENSPVAG00000013467	RBFOX1	71	96.622	ENSCAFG00020024881	RBFOX1	83	96.622	Canis_lupus_dingo
ENSPVAG00000013467	RBFOX1	93	94.359	ENSCHIG00000023549	RBFOX1	98	94.359	Capra_hircus
ENSPVAG00000013467	RBFOX1	93	94.344	ENSTSYG00000005334	RBFOX1	100	94.344	Carlito_syrichta
ENSPVAG00000013467	RBFOX1	100	93.780	ENSCAPG00000017669	RBFOX1	100	93.780	Cavia_aperea
ENSPVAG00000013467	RBFOX1	100	93.780	ENSCPOG00000011314	RBFOX1	100	93.780	Cavia_porcellus
ENSPVAG00000013467	RBFOX1	100	94.019	ENSCCAG00000023031	RBFOX1	100	94.019	Cebus_capucinus
ENSPVAG00000013467	RBFOX1	100	94.019	ENSCATG00000033816	RBFOX1	100	94.019	Cercocebus_atys
ENSPVAG00000013467	RBFOX1	100	93.780	ENSCLAG00000012761	RBFOX1	100	93.780	Chinchilla_lanigera
ENSPVAG00000013467	RBFOX1	72	94.684	ENSCSAG00000008739	RBFOX1	80	94.684	Chlorocebus_sabaeus
ENSPVAG00000013467	RBFOX1	100	77.990	ENSCHOG00000012843	RBFOX1	100	77.990	Choloepus_hoffmanni
ENSPVAG00000013467	RBFOX1	93	90.000	ENSCPBG00000026626	RBFOX1	98	90.000	Chrysemys_picta_bellii
ENSPVAG00000013467	RBFOX1	100	94.019	ENSCANG00000033125	RBFOX1	100	94.019	Colobus_angolensis_palliatus
ENSPVAG00000013467	RBFOX1	100	93.062	ENSCGRG00001013729	Rbfox1	100	93.062	Cricetulus_griseus_chok1gshd
ENSPVAG00000013467	RBFOX1	100	93.062	ENSCGRG00000003272	Rbfox1	100	93.062	Cricetulus_griseus_crigri
ENSPVAG00000013467	RBFOX1	90	66.080	ENSCSEG00000008840	rbfox1	100	66.080	Cynoglossus_semilaevis
ENSPVAG00000013467	RBFOX1	94	75.765	ENSDARG00000014746	rbfox1	100	84.878	Danio_rerio
ENSPVAG00000013467	RBFOX1	94	91.816	ENSDNOG00000043612	RBFOX1	94	92.072	Dasypus_novemcinctus
ENSPVAG00000013467	RBFOX1	93	89.567	ENSDORG00000010024	Rbfox1	97	89.313	Dipodomys_ordii
ENSPVAG00000013467	RBFOX1	100	74.641	ENSETEG00000003771	RBFOX1	100	74.641	Echinops_telfairi
ENSPVAG00000013467	RBFOX1	97	95.062	ENSEASG00005011599	RBFOX1	98	95.128	Equus_asinus_asinus
ENSPVAG00000013467	RBFOX1	97	95.309	ENSECAG00000012667	RBFOX1	98	95.309	Equus_caballus
ENSPVAG00000013467	RBFOX1	81	63.636	ENSELUG00000013096	rbfox1	99	63.636	Esox_lucius
ENSPVAG00000013467	RBFOX1	94	91.646	ENSFCAG00000025322	RBFOX1	90	92.092	Felis_catus
ENSPVAG00000013467	RBFOX1	72	90.698	ENSFALG00000004027	RBFOX1	90	90.698	Ficedula_albicollis
ENSPVAG00000013467	RBFOX1	100	94.258	ENSFDAG00000007388	RBFOX1	100	94.258	Fukomys_damarensis
ENSPVAG00000013467	RBFOX1	100	88.995	ENSGALG00000034325	RBFOX1	100	88.995	Gallus_gallus
ENSPVAG00000013467	RBFOX1	100	88.756	ENSGAGG00000023681	RBFOX1	100	88.756	Gopherus_agassizii
ENSPVAG00000013467	RBFOX1	100	94.019	ENSGGOG00000016871	-	100	94.019	Gorilla_gorilla
ENSPVAG00000013467	RBFOX1	100	94.019	ENSHGLG00000016944	RBFOX1	100	94.019	Heterocephalus_glaber_female
ENSPVAG00000013467	RBFOX1	100	94.019	ENSHGLG00100003272	RBFOX1	100	94.019	Heterocephalus_glaber_male
ENSPVAG00000013467	RBFOX1	81	66.667	ENSHCOG00000016419	rbfox1	91	66.667	Hippocampus_comes
ENSPVAG00000013467	RBFOX1	95	74.307	ENSIPUG00000015215	rbfox1	100	77.249	Ictalurus_punctatus
ENSPVAG00000013467	RBFOX1	100	92.823	ENSSTOG00000000322	RBFOX1	100	92.823	Ictidomys_tridecemlineatus
ENSPVAG00000013467	RBFOX1	100	90.191	ENSJJAG00000002575	Rbfox1	100	90.191	Jaculus_jaculus
ENSPVAG00000013467	RBFOX1	94	69.250	ENSLBEG00000014659	rbfox1	98	68.250	Labrus_bergylta
ENSPVAG00000013467	RBFOX1	94	80.151	ENSLOCG00000006675	rbfox1	99	80.506	Lepisosteus_oculatus
ENSPVAG00000013467	RBFOX1	74	94.156	ENSLAFG00000011480	RBFOX1	100	94.156	Loxodonta_africana
ENSPVAG00000013467	RBFOX1	100	93.780	ENSMFAG00000036447	RBFOX1	100	93.780	Macaca_fascicularis
ENSPVAG00000013467	RBFOX1	100	93.780	ENSMMUG00000003458	RBFOX1	100	93.780	Macaca_mulatta
ENSPVAG00000013467	RBFOX1	100	93.780	ENSMNEG00000032034	RBFOX1	100	93.780	Macaca_nemestrina
ENSPVAG00000013467	RBFOX1	100	94.019	ENSMLEG00000015382	RBFOX1	100	94.019	Mandrillus_leucophaeus
ENSPVAG00000013467	RBFOX1	90	69.466	ENSMAMG00000003142	rbfox1	100	69.975	Mastacembelus_armatus
ENSPVAG00000013467	RBFOX1	68	85.965	ENSMGAG00000008606	RBFOX1	96	85.714	Meleagris_gallopavo
ENSPVAG00000013467	RBFOX1	92	54.922	ENSMAUG00000020570	Rbfox1	96	53.886	Mesocricetus_auratus
ENSPVAG00000013467	RBFOX1	96	84.864	ENSMICG00000034286	RBFOX1	100	85.112	Microcebus_murinus
ENSPVAG00000013467	RBFOX1	100	93.062	ENSMOCG00000020932	Rbfox1	100	93.062	Microtus_ochrogaster
ENSPVAG00000013467	RBFOX1	82	67.052	ENSMMOG00000009716	rbfox1	86	66.862	Mola_mola
ENSPVAG00000013467	RBFOX1	69	93.772	ENSMODG00000005826	RBFOX1	82	93.772	Monodelphis_domestica
ENSPVAG00000013467	RBFOX1	99	66.972	ENSMALG00000003337	rbfox1	98	70.223	Monopterus_albus
ENSPVAG00000013467	RBFOX1	100	93.301	MGP_CAROLIEiJ_G0020427	Rbfox1	100	93.301	Mus_caroli
ENSPVAG00000013467	RBFOX1	100	93.062	ENSMUSG00000008658	Rbfox1	100	93.062	Mus_musculus
ENSPVAG00000013467	RBFOX1	100	93.301	MGP_PahariEiJ_G0016135	Rbfox1	100	93.301	Mus_pahari
ENSPVAG00000013467	RBFOX1	100	92.823	MGP_SPRETEiJ_G0021321	Rbfox1	100	92.823	Mus_spretus
ENSPVAG00000013467	RBFOX1	86	90.000	ENSMPUG00000014822	RBFOX1	84	95.137	Mustela_putorius_furo
ENSPVAG00000013467	RBFOX1	74	91.883	ENSMLUG00000015896	RBFOX1	100	91.883	Myotis_lucifugus
ENSPVAG00000013467	RBFOX1	100	93.541	ENSNGAG00000023276	Rbfox1	100	93.541	Nannospalax_galili
ENSPVAG00000013467	RBFOX1	96	57.209	ENSNBRG00000011084	rbfox1	98	57.209	Neolamprologus_brichardi
ENSPVAG00000013467	RBFOX1	100	93.780	ENSNLEG00000010017	-	100	93.780	Nomascus_leucogenys
ENSPVAG00000013467	RBFOX1	100	81.818	ENSMEUG00000012525	RBFOX1	100	81.818	Notamacropus_eugenii
ENSPVAG00000013467	RBFOX1	100	76.316	ENSOPRG00000006199	-	100	75.120	Ochotona_princeps
ENSPVAG00000013467	RBFOX1	100	93.301	ENSODEG00000013166	RBFOX1	100	93.301	Octodon_degus
ENSPVAG00000013467	RBFOX1	72	92.691	ENSOANG00000002379	RBFOX1	80	92.691	Ornithorhynchus_anatinus
ENSPVAG00000013467	RBFOX1	52	94.037	ENSOCUG00000001205	-	97	94.037	Oryctolagus_cuniculus
ENSPVAG00000013467	RBFOX1	94	91.816	ENSOGAG00000025535	RBFOX1	98	91.816	Otolemur_garnettii
ENSPVAG00000013467	RBFOX1	60	82.470	ENSOARG00000005135	RBFOX1	100	82.470	Ovis_aries
ENSPVAG00000013467	RBFOX1	93	92.288	ENSPPAG00000036238	-	100	92.288	Pan_paniscus
ENSPVAG00000013467	RBFOX1	100	94.498	ENSPPRG00000006546	RBFOX1	100	94.498	Panthera_pardus
ENSPVAG00000013467	RBFOX1	93	80.977	ENSPTIG00000021154	RBFOX1	99	80.000	Panthera_tigris_altaica
ENSPVAG00000013467	RBFOX1	100	94.019	ENSPTRG00000007744	RBFOX1	100	94.019	Pan_troglodytes
ENSPVAG00000013467	RBFOX1	100	94.019	ENSPANG00000026500	RBFOX1	100	94.019	Papio_anubis
ENSPVAG00000013467	RBFOX1	94	76.590	ENSPKIG00000009667	-	95	77.236	Paramormyrops_kingsleyae
ENSPVAG00000013467	RBFOX1	71	81.419	ENSPKIG00000019353	rbfox1	86	81.507	Paramormyrops_kingsleyae
ENSPVAG00000013467	RBFOX1	93	88.205	ENSPSIG00000006523	RBFOX1	97	88.205	Pelodiscus_sinensis
ENSPVAG00000013467	RBFOX1	100	93.301	ENSPEMG00000017607	Rbfox1	100	93.301	Peromyscus_maniculatus_bairdii
ENSPVAG00000013467	RBFOX1	70	86.942	ENSPCIG00000026887	RBFOX1	100	81.518	Phascolarctos_cinereus
ENSPVAG00000013467	RBFOX1	79	94.225	ENSPPYG00000007079	-	84	94.225	Pongo_abelii
ENSPVAG00000013467	RBFOX1	90	85.185	ENSPCAG00000002630	RBFOX1	100	85.185	Procavia_capensis
ENSPVAG00000013467	RBFOX1	100	94.019	ENSPCOG00000025687	RBFOX1	100	94.019	Propithecus_coquereli
ENSPVAG00000013467	RBFOX1	90	75.063	ENSPNAG00000023109	rbfox1	100	75.063	Pygocentrus_nattereri
ENSPVAG00000013467	RBFOX1	100	90.670	ENSRNOG00000002827	Rbfox1	100	90.670	Rattus_norvegicus
ENSPVAG00000013467	RBFOX1	93	92.288	ENSRBIG00000044478	RBFOX1	100	92.288	Rhinopithecus_bieti
ENSPVAG00000013467	RBFOX1	100	94.019	ENSRROG00000044411	RBFOX1	100	94.019	Rhinopithecus_roxellana
ENSPVAG00000013467	RBFOX1	93	92.308	ENSSBOG00000033726	RBFOX1	97	92.308	Saimiri_boliviensis_boliviensis
ENSPVAG00000013467	RBFOX1	94	87.212	ENSSHAG00000009257	RBFOX1	98	87.212	Sarcophilus_harrisii
ENSPVAG00000013467	RBFOX1	88	64.439	ENSSFOG00015009955	-	87	64.439	Scleropages_formosus
ENSPVAG00000013467	RBFOX1	93	65.482	ENSSFOG00015023675	rbfox1	87	89.855	Scleropages_formosus
ENSPVAG00000013467	RBFOX1	97	69.668	ENSSMAG00000015505	rbfox1	96	69.668	Scophthalmus_maximus
ENSPVAG00000013467	RBFOX1	94	70.781	ENSSDUG00000016413	rbfox1	99	70.051	Seriola_dumerili
ENSPVAG00000013467	RBFOX1	81	68.421	ENSSLDG00000009353	rbfox1	93	69.062	Seriola_lalandi_dorsalis
ENSPVAG00000013467	RBFOX1	81	78.299	ENSSPUG00000009732	RBFOX1	87	78.299	Sphenodon_punctatus
ENSPVAG00000013467	RBFOX1	95	69.727	ENSSPAG00000009723	rbfox1	100	70.516	Stegastes_partitus
ENSPVAG00000013467	RBFOX1	97	94.321	ENSSSCG00000007917	RBFOX1	98	94.321	Sus_scrofa
ENSPVAG00000013467	RBFOX1	93	88.205	ENSTGUG00000004562	RBFOX1	100	88.205	Taeniopygia_guttata
ENSPVAG00000013467	RBFOX1	93	70.516	ENSTRUG00000020940	rbfox1	99	70.270	Takifugu_rubripes
ENSPVAG00000013467	RBFOX1	64	50.159	ENSTNIG00000002567	rbfox1	100	52.063	Tetraodon_nigroviridis
ENSPVAG00000013467	RBFOX1	81	93.103	ENSTBEG00000009169	-	81	93.103	Tupaia_belangeri
ENSPVAG00000013467	RBFOX1	100	94.498	ENSTTRG00000005700	RBFOX1	100	94.498	Tursiops_truncatus
ENSPVAG00000013467	RBFOX1	92	90.365	ENSUAMG00000024633	RBFOX1	97	89.091	Ursus_americanus
ENSPVAG00000013467	RBFOX1	92	80.729	ENSUMAG00000003579	RBFOX1	86	97.101	Ursus_maritimus
ENSPVAG00000013467	RBFOX1	81	96.552	ENSVPAG00000001284	RBFOX1	81	96.552	Vicugna_pacos
ENSPVAG00000013467	RBFOX1	94	91.646	ENSVVUG00000017311	RBFOX1	90	92.092	Vulpes_vulpes