EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000013706 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 16804 bases
Position: chrGeneScaffold_2545:42357-59160
Accession: 105303499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012927	AD	PF09793.9	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000013706	LSM12-201	588	-	ENSPVAP00000012927	195 (aa)	XP_011375504	UPI00018B2A33

Gene Model

Click here to download ENSPVAG00000013706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000013706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000013706	LSM12	100	99.487	ENSG00000161654	LSM12	100	99.487	Homo_sapiens
ENSPVAG00000013706	LSM12	100	85.714	ENSAPOG00000007907	lsm12b	100	85.714	Acanthochromis_polyacanthus
ENSPVAG00000013706	LSM12	100	97.475	ENSAMEG00000018321	LSM12	100	97.475	Ailuropoda_melanoleuca
ENSPVAG00000013706	LSM12	100	84.694	ENSACIG00000008538	lsm12b	100	84.694	Amphilophus_citrinellus
ENSPVAG00000013706	LSM12	100	86.224	ENSAOCG00000021847	lsm12b	88	86.224	Amphiprion_ocellaris
ENSPVAG00000013706	LSM12	100	86.224	ENSAPEG00000002252	lsm12b	100	86.224	Amphiprion_percula
ENSPVAG00000013706	LSM12	100	85.714	ENSATEG00000005705	lsm12b	100	85.714	Anabas_testudineus
ENSPVAG00000013706	LSM12	99	93.264	ENSACAG00000004618	LSM12	99	93.264	Anolis_carolinensis
ENSPVAG00000013706	LSM12	100	99.487	ENSANAG00000029011	LSM12	100	99.487	Aotus_nancymaae
ENSPVAG00000013706	LSM12	100	85.204	ENSACLG00000026332	lsm12b	100	85.204	Astatotilapia_calliptera
ENSPVAG00000013706	LSM12	100	79.592	ENSAMXG00000036117	lsm12a	91	79.592	Astyanax_mexicanus
ENSPVAG00000013706	LSM12	100	84.184	ENSAMXG00000032952	lsm12b	100	84.184	Astyanax_mexicanus
ENSPVAG00000013706	LSM12	100	99.487	ENSBTAG00000016252	LSM12	100	99.487	Bos_taurus
ENSPVAG00000013706	LSM12	100	99.487	ENSCJAG00000048480	LSM12	100	99.487	Callithrix_jacchus
ENSPVAG00000013706	LSM12	100	99.487	ENSCAFG00000014379	LSM12	92	99.487	Canis_familiaris
ENSPVAG00000013706	LSM12	100	99.487	ENSCAFG00020012173	LSM12	100	99.487	Canis_lupus_dingo
ENSPVAG00000013706	LSM12	100	99.487	ENSCHIG00000018175	LSM12	100	99.487	Capra_hircus
ENSPVAG00000013706	LSM12	100	99.487	ENSTSYG00000036361	LSM12	100	99.487	Carlito_syrichta
ENSPVAG00000013706	LSM12	83	93.827	ENSCAPG00000009647	LSM12	89	93.827	Cavia_aperea
ENSPVAG00000013706	LSM12	100	97.436	ENSCPOG00000012860	LSM12	100	97.436	Cavia_porcellus
ENSPVAG00000013706	LSM12	100	99.487	ENSCCAG00000032905	LSM12	100	99.487	Cebus_capucinus
ENSPVAG00000013706	LSM12	100	99.487	ENSCATG00000030577	-	100	99.487	Cercocebus_atys
ENSPVAG00000013706	LSM12	100	98.462	ENSCLAG00000015759	LSM12	100	98.462	Chinchilla_lanigera
ENSPVAG00000013706	LSM12	100	98.974	ENSCSAG00000003486	LSM12	100	98.974	Chlorocebus_sabaeus
ENSPVAG00000013706	LSM12	56	99.083	ENSCHOG00000001198	LSM12	100	99.083	Choloepus_hoffmanni
ENSPVAG00000013706	LSM12	99	92.746	ENSCPBG00000027105	LSM12	99	92.746	Chrysemys_picta_bellii
ENSPVAG00000013706	LSM12	100	99.487	ENSCANG00000043328	LSM12	100	99.487	Colobus_angolensis_palliatus
ENSPVAG00000013706	LSM12	100	99.487	ENSCGRG00001002094	Lsm12	100	99.487	Cricetulus_griseus_chok1gshd
ENSPVAG00000013706	LSM12	86	92.262	ENSCGRG00000004316	Lsm12	95	92.262	Cricetulus_griseus_crigri
ENSPVAG00000013706	LSM12	100	85.204	ENSCSEG00000008434	lsm12b	100	85.204	Cynoglossus_semilaevis
ENSPVAG00000013706	LSM12	100	84.184	ENSCVAG00000008755	lsm12b	100	84.184	Cyprinodon_variegatus
ENSPVAG00000013706	LSM12	100	76.531	ENSDARG00000028848	lsm12a	100	76.531	Danio_rerio
ENSPVAG00000013706	LSM12	100	84.694	ENSDARG00000109510	lsm12b	100	84.694	Danio_rerio
ENSPVAG00000013706	LSM12	100	98.974	ENSDNOG00000002418	LSM12	91	98.974	Dasypus_novemcinctus
ENSPVAG00000013706	LSM12	100	99.487	ENSDORG00000016381	Lsm12	100	99.487	Dipodomys_ordii
ENSPVAG00000013706	LSM12	83	33.133	FBgn0030364	Lsm12	76	32.934	Drosophila_melanogaster
ENSPVAG00000013706	LSM12	74	32.278	FBgn0036057	CG14164	83	32.278	Drosophila_melanogaster
ENSPVAG00000013706	LSM12	90	87.429	ENSETEG00000011012	-	100	87.429	Echinops_telfairi
ENSPVAG00000013706	LSM12	100	98.974	ENSETEG00000008374	LSM12	100	98.974	Echinops_telfairi
ENSPVAG00000013706	LSM12	84	62.805	ENSEBUG00000016299	lsm12a	92	62.805	Eptatretus_burgeri
ENSPVAG00000013706	LSM12	100	99.487	ENSEASG00005010155	LSM12	100	99.487	Equus_asinus_asinus
ENSPVAG00000013706	LSM12	100	99.487	ENSECAG00000009071	LSM12	100	99.487	Equus_caballus
ENSPVAG00000013706	LSM12	78	98.039	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSPVAG00000013706	LSM12	100	81.633	ENSELUG00000000256	-	100	81.633	Esox_lucius
ENSPVAG00000013706	LSM12	100	83.673	ENSELUG00000015538	lsm12b	100	79.082	Esox_lucius
ENSPVAG00000013706	LSM12	100	99.487	ENSFCAG00000037021	LSM12	100	99.487	Felis_catus
ENSPVAG00000013706	LSM12	76	98.649	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSPVAG00000013706	LSM12	100	84.184	ENSFHEG00000019913	lsm12b	100	84.184	Fundulus_heteroclitus
ENSPVAG00000013706	LSM12	81	84.810	ENSGMOG00000015449	lsm12b	100	84.810	Gadus_morhua
ENSPVAG00000013706	LSM12	78	93.464	ENSGALG00000039803	LSM12	100	93.464	Gallus_gallus
ENSPVAG00000013706	LSM12	100	84.184	ENSGAFG00000011829	lsm12b	100	84.184	Gambusia_affinis
ENSPVAG00000013706	LSM12	81	85.443	ENSGACG00000003428	lsm12b	100	85.443	Gasterosteus_aculeatus
ENSPVAG00000013706	LSM12	99	93.782	ENSGAGG00000021965	LSM12	99	93.782	Gopherus_agassizii
ENSPVAG00000013706	LSM12	100	99.487	ENSGGOG00000010589	-	100	99.487	Gorilla_gorilla
ENSPVAG00000013706	LSM12	85	86.228	ENSHBUG00000007667	lsm12b	74	86.228	Haplochromis_burtoni
ENSPVAG00000013706	LSM12	100	99.487	ENSHGLG00000011411	LSM12	100	99.487	Heterocephalus_glaber_female
ENSPVAG00000013706	LSM12	91	86.740	ENSHGLG00100000241	LSM12	96	86.740	Heterocephalus_glaber_male
ENSPVAG00000013706	LSM12	100	83.673	ENSHCOG00000002094	lsm12b	100	83.673	Hippocampus_comes
ENSPVAG00000013706	LSM12	100	85.714	ENSIPUG00000014800	lsm12	100	85.714	Ictalurus_punctatus
ENSPVAG00000013706	LSM12	99	75.773	ENSIPUG00000008936	lsm12a	99	75.773	Ictalurus_punctatus
ENSPVAG00000013706	LSM12	100	99.487	ENSSTOG00000007403	LSM12	100	99.487	Ictidomys_tridecemlineatus
ENSPVAG00000013706	LSM12	81	84.277	ENSJJAG00000014652	-	95	84.277	Jaculus_jaculus
ENSPVAG00000013706	LSM12	100	98.462	ENSJJAG00000004364	-	100	98.462	Jaculus_jaculus
ENSPVAG00000013706	LSM12	97	87.368	ENSJJAG00000011793	-	100	87.368	Jaculus_jaculus
ENSPVAG00000013706	LSM12	85	86.228	ENSKMAG00000007704	lsm12b	56	86.228	Kryptolebias_marmoratus
ENSPVAG00000013706	LSM12	100	86.224	ENSLBEG00000027999	lsm12b	100	86.224	Labrus_bergylta
ENSPVAG00000013706	LSM12	99	90.674	ENSLACG00000015981	LSM12	99	90.674	Latimeria_chalumnae
ENSPVAG00000013706	LSM12	100	84.184	ENSLOCG00000013079	lsm12b	99	84.184	Lepisosteus_oculatus
ENSPVAG00000013706	LSM12	100	99.487	ENSLAFG00000005202	LSM12	100	99.487	Loxodonta_africana
ENSPVAG00000013706	LSM12	100	99.487	ENSMFAG00000031376	LSM12	100	99.487	Macaca_fascicularis
ENSPVAG00000013706	LSM12	65	86.207	ENSMMUG00000038408	-	100	86.207	Macaca_mulatta
ENSPVAG00000013706	LSM12	100	99.487	ENSMMUG00000006804	LSM12	100	99.487	Macaca_mulatta
ENSPVAG00000013706	LSM12	65	86.207	ENSMMUG00000042106	-	100	86.207	Macaca_mulatta
ENSPVAG00000013706	LSM12	100	99.487	ENSMNEG00000030594	-	100	99.487	Macaca_nemestrina
ENSPVAG00000013706	LSM12	100	99.487	ENSMLEG00000039934	LSM12	100	99.487	Mandrillus_leucophaeus
ENSPVAG00000013706	LSM12	100	85.714	ENSMAMG00000004279	lsm12b	100	85.714	Mastacembelus_armatus
ENSPVAG00000013706	LSM12	100	85.204	ENSMZEG00005005754	lsm12b	100	85.204	Maylandia_zebra
ENSPVAG00000013706	LSM12	100	98.974	ENSMICG00000037219	LSM12	100	98.974	Microcebus_murinus
ENSPVAG00000013706	LSM12	100	99.487	ENSMOCG00000019878	-	100	99.487	Microtus_ochrogaster
ENSPVAG00000013706	LSM12	100	83.590	ENSMOCG00000017015	-	86	83.590	Microtus_ochrogaster
ENSPVAG00000013706	LSM12	100	85.714	ENSMMOG00000020848	lsm12b	100	85.714	Mola_mola
ENSPVAG00000013706	LSM12	100	85.714	ENSMALG00000007578	lsm12b	100	85.714	Monopterus_albus
ENSPVAG00000013706	LSM12	100	98.974	MGP_CAROLIEiJ_G0017241	Lsm12	100	98.974	Mus_caroli
ENSPVAG00000013706	LSM12	100	99.487	ENSMUSG00000020922	Lsm12	100	99.487	Mus_musculus
ENSPVAG00000013706	LSM12	100	91.509	MGP_PahariEiJ_G0018371	Lsm12	100	91.509	Mus_pahari
ENSPVAG00000013706	LSM12	100	98.974	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSPVAG00000013706	LSM12	100	98.974	ENSMLUG00000006391	LSM12	100	98.974	Myotis_lucifugus
ENSPVAG00000013706	LSM12	100	99.487	ENSNGAG00000001870	Lsm12	100	99.487	Nannospalax_galili
ENSPVAG00000013706	LSM12	100	67.327	ENSNGAG00000015429	-	100	67.327	Nannospalax_galili
ENSPVAG00000013706	LSM12	100	85.204	ENSNBRG00000006266	lsm12b	100	85.204	Neolamprologus_brichardi
ENSPVAG00000013706	LSM12	100	99.487	ENSNLEG00000005580	-	100	99.487	Nomascus_leucogenys
ENSPVAG00000013706	LSM12	85	97.576	ENSMEUG00000007501	-	100	97.576	Notamacropus_eugenii
ENSPVAG00000013706	LSM12	100	99.487	ENSOPRG00000008552	LSM12	100	99.487	Ochotona_princeps
ENSPVAG00000013706	LSM12	100	88.205	ENSODEG00000007886	-	74	88.205	Octodon_degus
ENSPVAG00000013706	LSM12	100	97.949	ENSODEG00000017998	-	100	97.949	Octodon_degus
ENSPVAG00000013706	LSM12	100	85.204	ENSONIG00000007933	lsm12b	100	85.204	Oreochromis_niloticus
ENSPVAG00000013706	LSM12	99	92.784	ENSOCUG00000021254	-	100	92.784	Oryctolagus_cuniculus
ENSPVAG00000013706	LSM12	99	92.784	ENSOCUG00000027889	-	100	92.784	Oryctolagus_cuniculus
ENSPVAG00000013706	LSM12	99	91.753	ENSOCUG00000024823	-	100	91.753	Oryctolagus_cuniculus
ENSPVAG00000013706	LSM12	100	97.475	ENSOCUG00000008566	-	100	97.475	Oryctolagus_cuniculus
ENSPVAG00000013706	LSM12	100	84.694	ENSORLG00000011310	lsm12b	100	84.694	Oryzias_latipes
ENSPVAG00000013706	LSM12	100	84.694	ENSORLG00020002060	lsm12b	92	84.694	Oryzias_latipes_hni
ENSPVAG00000013706	LSM12	100	84.694	ENSORLG00015001647	lsm12b	92	84.694	Oryzias_latipes_hsok
ENSPVAG00000013706	LSM12	100	85.714	ENSOMEG00000006184	lsm12b	92	85.714	Oryzias_melastigma
ENSPVAG00000013706	LSM12	100	98.974	ENSOGAG00000010489	LSM12	100	98.974	Otolemur_garnettii
ENSPVAG00000013706	LSM12	100	96.020	ENSOARG00000006589	LSM12	100	96.020	Ovis_aries
ENSPVAG00000013706	LSM12	100	89.231	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSPVAG00000013706	LSM12	100	99.487	ENSPPRG00000023420	LSM12	100	99.487	Panthera_pardus
ENSPVAG00000013706	LSM12	78	99.346	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSPVAG00000013706	LSM12	73	96.396	ENSPTIG00000014850	-	100	96.396	Panthera_tigris_altaica
ENSPVAG00000013706	LSM12	100	99.487	ENSPTRG00000009261	LSM12	100	99.487	Pan_troglodytes
ENSPVAG00000013706	LSM12	100	99.487	ENSPANG00000021315	-	100	99.487	Papio_anubis
ENSPVAG00000013706	LSM12	99	76.289	ENSPKIG00000017932	-	99	76.289	Paramormyrops_kingsleyae
ENSPVAG00000013706	LSM12	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSPVAG00000013706	LSM12	100	85.204	ENSPMGG00000021344	lsm12b	100	85.204	Periophthalmus_magnuspinnatus
ENSPVAG00000013706	LSM12	100	99.487	ENSPEMG00000012199	Lsm12	100	99.487	Peromyscus_maniculatus_bairdii
ENSPVAG00000013706	LSM12	88	65.698	ENSPMAG00000005461	lsm12a	99	65.698	Petromyzon_marinus
ENSPVAG00000013706	LSM12	100	96.410	ENSPCIG00000020244	LSM12	100	96.410	Phascolarctos_cinereus
ENSPVAG00000013706	LSM12	100	83.163	ENSPFOG00000015930	lsm12b	100	83.163	Poecilia_formosa
ENSPVAG00000013706	LSM12	100	83.163	ENSPLAG00000021089	lsm12b	100	83.163	Poecilia_latipinna
ENSPVAG00000013706	LSM12	100	83.163	ENSPMEG00000012961	lsm12b	100	83.163	Poecilia_mexicana
ENSPVAG00000013706	LSM12	88	85.380	ENSPREG00000010236	lsm12b	95	85.380	Poecilia_reticulata
ENSPVAG00000013706	LSM12	100	99.487	ENSPPYG00000008344	LSM12	100	99.487	Pongo_abelii
ENSPVAG00000013706	LSM12	82	98.742	ENSPCAG00000008790	LSM12	100	98.742	Procavia_capensis
ENSPVAG00000013706	LSM12	100	99.487	ENSPCOG00000027951	LSM12	100	99.487	Propithecus_coquereli
ENSPVAG00000013706	LSM12	100	85.204	ENSPNYG00000003386	lsm12b	100	85.204	Pundamilia_nyererei
ENSPVAG00000013706	LSM12	100	77.551	ENSPNAG00000018435	lsm12a	100	77.551	Pygocentrus_nattereri
ENSPVAG00000013706	LSM12	100	83.673	ENSPNAG00000004186	lsm12b	100	83.673	Pygocentrus_nattereri
ENSPVAG00000013706	LSM12	100	99.487	ENSRNOG00000020894	Lsm12	100	99.487	Rattus_norvegicus
ENSPVAG00000013706	LSM12	100	99.487	ENSRBIG00000027910	LSM12	100	99.487	Rhinopithecus_bieti
ENSPVAG00000013706	LSM12	100	99.487	ENSRROG00000045530	-	100	99.487	Rhinopithecus_roxellana
ENSPVAG00000013706	LSM12	100	60.513	ENSRROG00000000537	-	100	60.513	Rhinopithecus_roxellana
ENSPVAG00000013706	LSM12	100	99.487	ENSSBOG00000025310	LSM12	100	99.487	Saimiri_boliviensis_boliviensis
ENSPVAG00000013706	LSM12	81	93.671	ENSSHAG00000014914	LSM12	100	93.671	Sarcophilus_harrisii
ENSPVAG00000013706	LSM12	100	82.653	ENSSFOG00015020392	lsm12a	100	82.653	Scleropages_formosus
ENSPVAG00000013706	LSM12	100	86.735	ENSSFOG00015009612	lsm12	100	86.735	Scleropages_formosus
ENSPVAG00000013706	LSM12	100	85.714	ENSSMAG00000008089	lsm12b	100	85.714	Scophthalmus_maximus
ENSPVAG00000013706	LSM12	100	86.735	ENSSDUG00000012711	lsm12b	100	86.735	Seriola_dumerili
ENSPVAG00000013706	LSM12	100	86.735	ENSSLDG00000007404	lsm12b	100	86.735	Seriola_lalandi_dorsalis
ENSPVAG00000013706	LSM12	78	98.693	ENSSARG00000005537	LSM12	100	98.693	Sorex_araneus
ENSPVAG00000013706	LSM12	99	94.301	ENSSPUG00000011984	LSM12	99	94.301	Sphenodon_punctatus
ENSPVAG00000013706	LSM12	100	86.224	ENSSPAG00000017058	lsm12b	100	86.224	Stegastes_partitus
ENSPVAG00000013706	LSM12	100	99.487	ENSSSCG00000032394	LSM12	100	99.487	Sus_scrofa
ENSPVAG00000013706	LSM12	100	84.694	ENSTRUG00000007121	lsm12b	100	84.694	Takifugu_rubripes
ENSPVAG00000013706	LSM12	100	84.184	ENSTNIG00000014436	lsm12b	100	84.184	Tetraodon_nigroviridis
ENSPVAG00000013706	LSM12	100	95.897	ENSTBEG00000012392	-	100	95.897	Tupaia_belangeri
ENSPVAG00000013706	LSM12	100	98.974	ENSTBEG00000012523	-	100	98.974	Tupaia_belangeri
ENSPVAG00000013706	LSM12	100	99.487	ENSTTRG00000010433	LSM12	100	99.487	Tursiops_truncatus
ENSPVAG00000013706	LSM12	100	99.487	ENSUAMG00000006313	LSM12	100	99.487	Ursus_americanus
ENSPVAG00000013706	LSM12	81	96.203	ENSUMAG00000012987	LSM12	90	96.203	Ursus_maritimus
ENSPVAG00000013706	LSM12	100	93.846	ENSVPAG00000011145	LSM12	100	93.846	Vicugna_pacos
ENSPVAG00000013706	LSM12	100	99.487	ENSVVUG00000017581	LSM12	100	99.487	Vulpes_vulpes
ENSPVAG00000013706	LSM12	82	65.000	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSPVAG00000013706	LSM12	100	84.184	ENSXCOG00000003994	lsm12b	100	84.184	Xiphophorus_couchianus
ENSPVAG00000013706	LSM12	100	84.184	ENSXMAG00000020950	lsm12b	100	84.184	Xiphophorus_maculatus