EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000013728 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H6
Alias: FLJ41410|FLJ45877|KIAA2035|ZC3HDC6
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 28217 bases
Position: chrGeneScaffold_3646:12575-40791
Accession: 24762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000012949	zf-CCCH	PF00642.24	5.7e-12	1	2
ENSPVAP00000012949	zf-CCCH	PF00642.24	5.7e-12	2	2
ENSPVAP00000012949	zf-CCCH_2	PF14608.6	3.6e-06	1	3
ENSPVAP00000012949	zf-CCCH_2	PF14608.6	3.6e-06	2	3
ENSPVAP00000012949	zf-CCCH_2	PF14608.6	3.6e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000013731	ZC3H6-201	3507	-	ENSPVAP00000012949	1168 (aa)	-	UPI00018B1723

Gene Model

Click here to download ENSPVAG00000013728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000013728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000013728	ZC3H6	70	94.059	ENSG00000188177	ZC3H6	69	94.059	Homo_sapiens
ENSPVAG00000013728	ZC3H6	69	94.059	ENSAMEG00000016194	ZC3H6	69	94.059	Ailuropoda_melanoleuca
ENSPVAG00000013728	ZC3H6	56	42.515	ENSAPEG00000014561	zc3h6	50	53.420	Amphiprion_percula
ENSPVAG00000013728	ZC3H6	61	58.583	ENSAPLG00000014287	ZC3H6	69	70.588	Anas_platyrhynchos
ENSPVAG00000013728	ZC3H6	70	92.079	ENSANAG00000024229	ZC3H6	69	92.079	Aotus_nancymaae
ENSPVAG00000013728	ZC3H6	70	92.079	ENSCJAG00000016479	ZC3H6	69	92.079	Callithrix_jacchus
ENSPVAG00000013728	ZC3H6	70	89.109	ENSCAFG00000007160	ZC3H6	69	86.139	Canis_familiaris
ENSPVAG00000013728	ZC3H6	70	88.119	ENSCAFG00020017525	ZC3H6	69	85.149	Canis_lupus_dingo
ENSPVAG00000013728	ZC3H6	59	67.101	ENSCHIG00000019719	-	69	68.935	Capra_hircus
ENSPVAG00000013728	ZC3H6	70	97.030	ENSTSYG00000031857	ZC3H6	69	97.030	Carlito_syrichta
ENSPVAG00000013728	ZC3H6	70	92.079	ENSCPOG00000003445	ZC3H6	69	92.079	Cavia_porcellus
ENSPVAG00000013728	ZC3H6	70	94.059	ENSCATG00000036595	ZC3H6	69	94.059	Cercocebus_atys
ENSPVAG00000013728	ZC3H6	61	70.204	ENSCLAG00000006605	ZC3H6	67	72.245	Chinchilla_lanigera
ENSPVAG00000013728	ZC3H6	62	70.516	ENSCSAG00000016793	ZC3H6	67	72.803	Chlorocebus_sabaeus
ENSPVAG00000013728	ZC3H6	70	94.059	ENSCANG00000041036	ZC3H6	69	94.059	Colobus_angolensis_palliatus
ENSPVAG00000013728	ZC3H6	70	67.078	ENSCGRG00001022022	Zc3h6	69	67.643	Cricetulus_griseus_chok1gshd
ENSPVAG00000013728	ZC3H6	70	88.119	ENSCGRG00000016162	Zc3h6	70	88.119	Cricetulus_griseus_crigri
ENSPVAG00000013728	ZC3H6	57	41.959	ENSCSEG00000012267	zc3h6	54	52.333	Cynoglossus_semilaevis
ENSPVAG00000013728	ZC3H6	69	85.149	ENSDNOG00000044811	ZC3H6	70	85.149	Dasypus_novemcinctus
ENSPVAG00000013728	ZC3H6	69	87.129	ENSDORG00000013967	Zc3h6	69	88.119	Dipodomys_ordii
ENSPVAG00000013728	ZC3H6	61	72.966	ENSEASG00005006493	ZC3H6	73	74.756	Equus_asinus_asinus
ENSPVAG00000013728	ZC3H6	69	96.040	ENSECAG00000023620	ZC3H6	69	96.040	Equus_caballus
ENSPVAG00000013728	ZC3H6	69	95.050	ENSFCAG00000008089	ZC3H6	69	95.050	Felis_catus
ENSPVAG00000013728	ZC3H6	70	68.627	ENSFALG00000011589	ZC3H6	69	68.627	Ficedula_albicollis
ENSPVAG00000013728	ZC3H6	70	92.079	ENSFDAG00000002521	ZC3H6	69	92.079	Fukomys_damarensis
ENSPVAG00000013728	ZC3H6	61	58.356	ENSGALG00000008269	ZC3H6	68	70.588	Gallus_gallus
ENSPVAG00000013728	ZC3H6	69	77.451	ENSGAGG00000010857	ZC3H6	69	77.451	Gopherus_agassizii
ENSPVAG00000013728	ZC3H6	70	94.059	ENSGGOG00000001665	ZC3H6	69	94.059	Gorilla_gorilla
ENSPVAG00000013728	ZC3H6	70	91.000	ENSHGLG00000011882	ZC3H6	67	91.000	Heterocephalus_glaber_female
ENSPVAG00000013728	ZC3H6	70	91.089	ENSHGLG00100002559	ZC3H6	69	91.089	Heterocephalus_glaber_male
ENSPVAG00000013728	ZC3H6	62	70.083	ENSSTOG00000008120	-	67	69.972	Ictidomys_tridecemlineatus
ENSPVAG00000013728	ZC3H6	70	83.168	ENSJJAG00000013206	Zc3h6	69	75.248	Jaculus_jaculus
ENSPVAG00000013728	ZC3H6	69	59.048	ENSLACG00000012014	ZC3H6	71	63.810	Latimeria_chalumnae
ENSPVAG00000013728	ZC3H6	68	58.416	ENSLOCG00000016548	zc3h6	68	45.554	Lepisosteus_oculatus
ENSPVAG00000013728	ZC3H6	61	68.646	ENSLAFG00000001151	ZC3H6	65	69.541	Loxodonta_africana
ENSPVAG00000013728	ZC3H6	70	94.059	ENSMFAG00000036963	ZC3H6	69	94.059	Macaca_fascicularis
ENSPVAG00000013728	ZC3H6	70	94.059	ENSMMUG00000016430	ZC3H6	69	94.059	Macaca_mulatta
ENSPVAG00000013728	ZC3H6	70	93.069	ENSMNEG00000031225	ZC3H6	69	93.069	Macaca_nemestrina
ENSPVAG00000013728	ZC3H6	70	94.059	ENSMLEG00000038821	ZC3H6	69	94.059	Mandrillus_leucophaeus
ENSPVAG00000013728	ZC3H6	61	58.082	ENSMGAG00000003025	ZC3H6	69	70.588	Meleagris_gallopavo
ENSPVAG00000013728	ZC3H6	70	87.129	ENSMAUG00000017009	Zc3h6	69	87.129	Mesocricetus_auratus
ENSPVAG00000013728	ZC3H6	70	92.079	ENSMICG00000036353	ZC3H6	69	92.079	Microcebus_murinus
ENSPVAG00000013728	ZC3H6	70	88.119	ENSMOCG00000002054	Zc3h6	69	88.119	Microtus_ochrogaster
ENSPVAG00000013728	ZC3H6	68	63.636	ENSMODG00000006612	ZC3H6	69	62.291	Monodelphis_domestica
ENSPVAG00000013728	ZC3H6	70	86.139	MGP_CAROLIEiJ_G0024278	Zc3h6	69	86.139	Mus_caroli
ENSPVAG00000013728	ZC3H6	70	87.129	ENSMUSG00000042851	Zc3h6	69	87.129	Mus_musculus
ENSPVAG00000013728	ZC3H6	70	89.109	MGP_PahariEiJ_G0025723	Zc3h6	69	89.109	Mus_pahari
ENSPVAG00000013728	ZC3H6	70	87.129	MGP_SPRETEiJ_G0025198	Zc3h6	69	87.129	Mus_spretus
ENSPVAG00000013728	ZC3H6	62	74.171	ENSMPUG00000009624	ZC3H6	68	74.860	Mustela_putorius_furo
ENSPVAG00000013728	ZC3H6	69	88.119	ENSMLUG00000004896	ZC3H6	69	89.109	Myotis_lucifugus
ENSPVAG00000013728	ZC3H6	64	76.744	ENSNGAG00000013596	Zc3h6	64	67.972	Nannospalax_galili
ENSPVAG00000013728	ZC3H6	70	93.000	ENSNLEG00000033657	ZC3H6	69	93.000	Nomascus_leucogenys
ENSPVAG00000013728	ZC3H6	70	92.079	ENSOPRG00000012717	ZC3H6	64	92.079	Ochotona_princeps
ENSPVAG00000013728	ZC3H6	65	93.023	ENSODEG00000009099	ZC3H6	66	91.667	Octodon_degus
ENSPVAG00000013728	ZC3H6	70	79.412	ENSOANG00000012054	-	67	79.412	Ornithorhynchus_anatinus
ENSPVAG00000013728	ZC3H6	66	83.673	ENSOCUG00000011125	ZC3H6	66	91.667	Oryctolagus_cuniculus
ENSPVAG00000013728	ZC3H6	70	95.050	ENSOGAG00000002556	ZC3H6	69	95.050	Otolemur_garnettii
ENSPVAG00000013728	ZC3H6	70	90.099	ENSOARG00000014503	ZC3H6	69	90.099	Ovis_aries
ENSPVAG00000013728	ZC3H6	70	94.059	ENSPPAG00000030495	ZC3H6	69	94.059	Pan_paniscus
ENSPVAG00000013728	ZC3H6	69	95.050	ENSPPRG00000005673	ZC3H6	69	95.050	Panthera_pardus
ENSPVAG00000013728	ZC3H6	69	94.059	ENSPTIG00000015800	ZC3H6	69	94.059	Panthera_tigris_altaica
ENSPVAG00000013728	ZC3H6	70	94.059	ENSPTRG00000012363	ZC3H6	69	94.059	Pan_troglodytes
ENSPVAG00000013728	ZC3H6	70	94.059	ENSPANG00000025224	ZC3H6	69	94.059	Papio_anubis
ENSPVAG00000013728	ZC3H6	56	44.023	ENSPKIG00000007353	zc3h6	62	43.786	Paramormyrops_kingsleyae
ENSPVAG00000013728	ZC3H6	69	80.392	ENSPSIG00000002520	ZC3H6	69	80.392	Pelodiscus_sinensis
ENSPVAG00000013728	ZC3H6	70	84.158	ENSPEMG00000000918	Zc3h6	70	84.158	Peromyscus_maniculatus_bairdii
ENSPVAG00000013728	ZC3H6	61	65.181	ENSPCIG00000029741	ZC3H6	67	65.460	Phascolarctos_cinereus
ENSPVAG00000013728	ZC3H6	61	64.138	ENSPCAG00000015468	ZC3H6	60	64.575	Procavia_capensis
ENSPVAG00000013728	ZC3H6	70	93.069	ENSPCOG00000016627	ZC3H6	69	92.079	Propithecus_coquereli
ENSPVAG00000013728	ZC3H6	57	45.997	ENSPNAG00000009331	zc3h6	56	44.369	Pygocentrus_nattereri
ENSPVAG00000013728	ZC3H6	70	85.149	ENSRNOG00000026277	Zc3h6	69	86.139	Rattus_norvegicus
ENSPVAG00000013728	ZC3H6	70	92.079	ENSSBOG00000033489	ZC3H6	69	92.079	Saimiri_boliviensis_boliviensis
ENSPVAG00000013728	ZC3H6	61	63.788	ENSSHAG00000016634	ZC3H6	72	63.788	Sarcophilus_harrisii
ENSPVAG00000013728	ZC3H6	56	43.582	ENSSFOG00015004488	zc3h6	57	41.758	Scleropages_formosus
ENSPVAG00000013728	ZC3H6	64	89.474	ENSSARG00000001035	ZC3H6	64	89.474	Sorex_araneus
ENSPVAG00000013728	ZC3H6	69	91.089	ENSSSCG00000008096	ZC3H6	71	91.089	Sus_scrofa
ENSPVAG00000013728	ZC3H6	69	75.862	ENSTGUG00000007468	ZC3H6	69	70.588	Taeniopygia_guttata
ENSPVAG00000013728	ZC3H6	57	43.219	ENSTRUG00000012901	zc3h6	55	42.939	Takifugu_rubripes
ENSPVAG00000013728	ZC3H6	57	43.870	ENSTNIG00000016608	zc3h6	70	42.657	Tetraodon_nigroviridis
ENSPVAG00000013728	ZC3H6	56	95.833	ENSTBEG00000016232	ZC3H6	59	95.833	Tupaia_belangeri
ENSPVAG00000013728	ZC3H6	50	92.079	ENSTTRG00000013154	ZC3H6	50	92.079	Tursiops_truncatus
ENSPVAG00000013728	ZC3H6	61	74.579	ENSUAMG00000002401	ZC3H6	68	74.579	Ursus_americanus
ENSPVAG00000013728	ZC3H6	61	74.719	ENSUMAG00000008663	ZC3H6	68	74.719	Ursus_maritimus
ENSPVAG00000013728	ZC3H6	69	95.050	ENSVPAG00000005912	ZC3H6	69	95.050	Vicugna_pacos
ENSPVAG00000013728	ZC3H6	62	73.204	ENSVVUG00000028662	ZC3H6	68	73.876	Vulpes_vulpes
ENSPVAG00000013728	ZC3H6	54	65.946	ENSXETG00000013762	zc3h6	51	65.946	Xenopus_tropicalis