EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000014276 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 48074 bases
Position: chrGeneScaffold_422:9695-57768
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000013457	Rif1_N	PF12231.8	6.7e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000014278	RIF1-201	7176	-	ENSPVAP00000013457	2392 (aa)	-	UPI00018B342E

Gene Model

Click here to download ENSPVAG00000014276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000014276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000014276	RIF1	95	89.024	ENSG00000080345	RIF1	93	89.024	Homo_sapiens
ENSPVAG00000014276	RIF1	95	89.452	ENSAMEG00000008461	RIF1	93	89.452	Ailuropoda_melanoleuca
ENSPVAG00000014276	RIF1	57	62.245	ENSACIG00000017765	rif1	59	62.245	Amphilophus_citrinellus
ENSPVAG00000014276	RIF1	58	59.388	ENSAOCG00000017231	rif1	56	59.388	Amphiprion_ocellaris
ENSPVAG00000014276	RIF1	55	59.100	ENSAPEG00000013228	rif1	54	59.100	Amphiprion_percula
ENSPVAG00000014276	RIF1	59	57.959	ENSATEG00000022887	rif1	60	57.959	Anabas_testudineus
ENSPVAG00000014276	RIF1	80	72.985	ENSAPLG00000007092	RIF1	86	72.985	Anas_platyrhynchos
ENSPVAG00000014276	RIF1	80	68.980	ENSACAG00000003714	RIF1	85	68.980	Anolis_carolinensis
ENSPVAG00000014276	RIF1	95	88.618	ENSANAG00000024840	RIF1	93	88.618	Aotus_nancymaae
ENSPVAG00000014276	RIF1	89	93.510	ENSBTAG00000021020	RIF1	92	93.510	Bos_taurus
ENSPVAG00000014276	RIF1	95	88.211	ENSCJAG00000003138	RIF1	93	88.211	Callithrix_jacchus
ENSPVAG00000014276	RIF1	95	88.032	ENSCAFG00000005670	RIF1	90	88.032	Canis_familiaris
ENSPVAG00000014276	RIF1	95	88.032	ENSCAFG00020016401	RIF1	93	88.032	Canis_lupus_dingo
ENSPVAG00000014276	RIF1	95	89.858	ENSCHIG00000020327	RIF1	93	89.858	Capra_hircus
ENSPVAG00000014276	RIF1	95	77.189	ENSTSYG00000008861	RIF1	93	77.189	Carlito_syrichta
ENSPVAG00000014276	RIF1	72	79.070	ENSCAPG00000008957	RIF1	84	79.070	Cavia_aperea
ENSPVAG00000014276	RIF1	95	82.020	ENSCPOG00000037898	RIF1	92	82.020	Cavia_porcellus
ENSPVAG00000014276	RIF1	95	83.333	ENSCCAG00000024760	RIF1	93	83.333	Cebus_capucinus
ENSPVAG00000014276	RIF1	95	89.271	ENSCATG00000033353	RIF1	93	89.271	Cercocebus_atys
ENSPVAG00000014276	RIF1	91	87.406	ENSCLAG00000001517	RIF1	92	87.406	Chinchilla_lanigera
ENSPVAG00000014276	RIF1	95	89.431	ENSCSAG00000016089	RIF1	93	89.431	Chlorocebus_sabaeus
ENSPVAG00000014276	RIF1	92	84.783	ENSCHOG00000007187	RIF1	89	84.783	Choloepus_hoffmanni
ENSPVAG00000014276	RIF1	83	73.224	ENSCPBG00000025885	RIF1	92	70.612	Chrysemys_picta_bellii
ENSPVAG00000014276	RIF1	94	89.069	ENSCANG00000028962	RIF1	95	89.069	Colobus_angolensis_palliatus
ENSPVAG00000014276	RIF1	95	83.000	ENSCGRG00001024589	Rif1	93	83.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000014276	RIF1	94	83.871	ENSCGRG00000010713	Rif1	93	83.871	Cricetulus_griseus_crigri
ENSPVAG00000014276	RIF1	56	58.071	ENSCSEG00000003945	rif1	59	58.012	Cynoglossus_semilaevis
ENSPVAG00000014276	RIF1	57	59.592	ENSCVAG00000022479	rif1	57	59.592	Cyprinodon_variegatus
ENSPVAG00000014276	RIF1	95	81.136	ENSDNOG00000011194	RIF1	90	81.136	Dasypus_novemcinctus
ENSPVAG00000014276	RIF1	85	74.645	ENSETEG00000012421	RIF1	83	74.645	Echinops_telfairi
ENSPVAG00000014276	RIF1	95	91.886	ENSEASG00005023434	RIF1	92	93.399	Equus_asinus_asinus
ENSPVAG00000014276	RIF1	92	98.333	ENSECAG00000012679	RIF1	93	98.333	Equus_caballus
ENSPVAG00000014276	RIF1	59	60.377	ENSELUG00000006826	rif1	50	60.164	Esox_lucius
ENSPVAG00000014276	RIF1	95	90.061	ENSFCAG00000029742	RIF1	93	90.061	Felis_catus
ENSPVAG00000014276	RIF1	73	76.656	ENSFALG00000013874	RIF1	83	76.656	Ficedula_albicollis
ENSPVAG00000014276	RIF1	95	86.410	ENSFDAG00000006538	RIF1	92	86.410	Fukomys_damarensis
ENSPVAG00000014276	RIF1	56	60.081	ENSFHEG00000013721	rif1	56	60.081	Fundulus_heteroclitus
ENSPVAG00000014276	RIF1	51	56.907	ENSGMOG00000003517	rif1	75	57.056	Gadus_morhua
ENSPVAG00000014276	RIF1	73	78.274	ENSGALG00000012484	RIF1	82	78.274	Gallus_gallus
ENSPVAG00000014276	RIF1	57	60.455	ENSGAFG00000017196	rif1	59	60.455	Gambusia_affinis
ENSPVAG00000014276	RIF1	56	58.824	ENSGACG00000008579	rif1	60	58.740	Gasterosteus_aculeatus
ENSPVAG00000014276	RIF1	80	71.538	ENSGAGG00000012595	RIF1	85	73.077	Gopherus_agassizii
ENSPVAG00000014276	RIF1	85	90.625	ENSGGOG00000040178	RIF1	89	90.625	Gorilla_gorilla
ENSPVAG00000014276	RIF1	57	60.656	ENSHBUG00000007125	rif1	60	60.656	Haplochromis_burtoni
ENSPVAG00000014276	RIF1	93	86.207	ENSHGLG00100009807	RIF1	95	86.207	Heterocephalus_glaber_male
ENSPVAG00000014276	RIF1	57	59.109	ENSHCOG00000015943	rif1	51	59.109	Hippocampus_comes
ENSPVAG00000014276	RIF1	56	59.290	ENSIPUG00000021703	rif1	55	59.138	Ictalurus_punctatus
ENSPVAG00000014276	RIF1	95	87.221	ENSSTOG00000020712	RIF1	93	87.221	Ictidomys_tridecemlineatus
ENSPVAG00000014276	RIF1	95	78.000	ENSJJAG00000023000	Rif1	92	78.000	Jaculus_jaculus
ENSPVAG00000014276	RIF1	57	58.351	ENSKMAG00000002852	rif1	57	58.351	Kryptolebias_marmoratus
ENSPVAG00000014276	RIF1	58	60.489	ENSLBEG00000023196	rif1	52	60.489	Labrus_bergylta
ENSPVAG00000014276	RIF1	80	64.906	ENSLACG00000005425	RIF1	81	64.906	Latimeria_chalumnae
ENSPVAG00000014276	RIF1	70	61.382	ENSLOCG00000002657	rif1	77	61.382	Lepisosteus_oculatus
ENSPVAG00000014276	RIF1	95	87.830	ENSLAFG00000009796	RIF1	93	87.830	Loxodonta_africana
ENSPVAG00000014276	RIF1	95	88.866	ENSMFAG00000032233	RIF1	93	88.866	Macaca_fascicularis
ENSPVAG00000014276	RIF1	95	88.664	ENSMMUG00000008611	RIF1	93	88.664	Macaca_mulatta
ENSPVAG00000014276	RIF1	95	88.866	ENSMNEG00000031616	RIF1	93	88.866	Macaca_nemestrina
ENSPVAG00000014276	RIF1	95	89.271	ENSMLEG00000042945	RIF1	93	89.271	Mandrillus_leucophaeus
ENSPVAG00000014276	RIF1	63	58.282	ENSMAMG00000001745	rif1	61	58.282	Mastacembelus_armatus
ENSPVAG00000014276	RIF1	57	61.191	ENSMZEG00005020920	rif1	59	61.191	Maylandia_zebra
ENSPVAG00000014276	RIF1	79	73.203	ENSMGAG00000012732	RIF1	82	73.203	Meleagris_gallopavo
ENSPVAG00000014276	RIF1	90	85.794	ENSMAUG00000013158	Rif1	91	85.794	Mesocricetus_auratus
ENSPVAG00000014276	RIF1	95	88.462	ENSMICG00000046127	RIF1	93	88.462	Microcebus_murinus
ENSPVAG00000014276	RIF1	95	77.485	ENSMOCG00000009381	Rif1	93	77.485	Microtus_ochrogaster
ENSPVAG00000014276	RIF1	56	57.755	ENSMMOG00000006519	rif1	55	57.755	Mola_mola
ENSPVAG00000014276	RIF1	58	60.123	ENSMALG00000016759	rif1	57	60.612	Monopterus_albus
ENSPVAG00000014276	RIF1	95	83.570	MGP_CAROLIEiJ_G0023555	Rif1	93	83.570	Mus_caroli
ENSPVAG00000014276	RIF1	95	82.400	ENSMUSG00000036202	Rif1	93	82.400	Mus_musculus
ENSPVAG00000014276	RIF1	95	74.848	MGP_PahariEiJ_G0025006	Rif1	92	74.848	Mus_pahari
ENSPVAG00000014276	RIF1	95	83.570	MGP_SPRETEiJ_G0024476	Rif1	93	83.570	Mus_spretus
ENSPVAG00000014276	RIF1	95	89.047	ENSMPUG00000000371	RIF1	93	89.047	Mustela_putorius_furo
ENSPVAG00000014276	RIF1	85	91.250	ENSMLUG00000003376	RIF1	92	91.250	Myotis_lucifugus
ENSPVAG00000014276	RIF1	95	84.787	ENSNGAG00000009268	Rif1	92	84.787	Nannospalax_galili
ENSPVAG00000014276	RIF1	56	60.246	ENSNBRG00000014257	rif1	59	59.146	Neolamprologus_brichardi
ENSPVAG00000014276	RIF1	95	85.885	ENSNLEG00000010955	RIF1	93	85.885	Nomascus_leucogenys
ENSPVAG00000014276	RIF1	75	77.232	ENSMEUG00000007601	-	80	77.232	Notamacropus_eugenii
ENSPVAG00000014276	RIF1	95	80.282	ENSODEG00000003950	RIF1	93	81.087	Octodon_degus
ENSPVAG00000014276	RIF1	57	60.692	ENSONIG00000013657	rif1	57	60.692	Oreochromis_niloticus
ENSPVAG00000014276	RIF1	71	79.393	ENSOANG00000006078	-	72	79.393	Ornithorhynchus_anatinus
ENSPVAG00000014276	RIF1	95	86.815	ENSOCUG00000017435	RIF1	93	86.815	Oryctolagus_cuniculus
ENSPVAG00000014276	RIF1	57	56.823	ENSORLG00020001302	rif1	59	56.823	Oryzias_latipes_hni
ENSPVAG00000014276	RIF1	56	56.823	ENSORLG00015000009	rif1	57	56.823	Oryzias_latipes_hsok
ENSPVAG00000014276	RIF1	56	56.998	ENSOMEG00000021513	rif1	58	56.998	Oryzias_melastigma
ENSPVAG00000014276	RIF1	95	87.854	ENSOGAG00000006141	RIF1	93	87.854	Otolemur_garnettii
ENSPVAG00000014276	RIF1	95	89.676	ENSOARG00000008930	RIF1	93	89.676	Ovis_aries
ENSPVAG00000014276	RIF1	95	88.821	ENSPPAG00000023754	RIF1	93	88.821	Pan_paniscus
ENSPVAG00000014276	RIF1	95	90.061	ENSPPRG00000003618	RIF1	93	90.061	Panthera_pardus
ENSPVAG00000014276	RIF1	95	90.061	ENSPTIG00000020652	RIF1	93	90.061	Panthera_tigris_altaica
ENSPVAG00000014276	RIF1	95	88.821	ENSPTRG00000012534	RIF1	93	88.821	Pan_troglodytes
ENSPVAG00000014276	RIF1	95	89.069	ENSPANG00000008525	RIF1	93	89.069	Papio_anubis
ENSPVAG00000014276	RIF1	65	61.031	ENSPKIG00000004267	rif1	59	61.089	Paramormyrops_kingsleyae
ENSPVAG00000014276	RIF1	57	58.678	ENSPMGG00000016141	rif1	66	58.980	Periophthalmus_magnuspinnatus
ENSPVAG00000014276	RIF1	94	85.371	ENSPEMG00000000446	Rif1	92	85.371	Peromyscus_maniculatus_bairdii
ENSPVAG00000014276	RIF1	91	79.192	ENSPCIG00000009185	RIF1	92	79.192	Phascolarctos_cinereus
ENSPVAG00000014276	RIF1	57	60.327	ENSPFOG00000017804	rif1	58	60.327	Poecilia_formosa
ENSPVAG00000014276	RIF1	50	64.127	ENSPFOG00000000554	-	55	63.303	Poecilia_formosa
ENSPVAG00000014276	RIF1	57	59.592	ENSPLAG00000017945	rif1	60	59.063	Poecilia_latipinna
ENSPVAG00000014276	RIF1	57	60.123	ENSPREG00000018052	rif1	57	60.123	Poecilia_reticulata
ENSPVAG00000014276	RIF1	95	89.228	ENSPPYG00000012846	RIF1	93	89.228	Pongo_abelii
ENSPVAG00000014276	RIF1	78	81.818	ENSPCAG00000009032	RIF1	76	81.818	Procavia_capensis
ENSPVAG00000014276	RIF1	95	88.057	ENSPCOG00000027888	RIF1	93	88.057	Propithecus_coquereli
ENSPVAG00000014276	RIF1	57	58.607	ENSPNYG00000012940	rif1	59	58.607	Pundamilia_nyererei
ENSPVAG00000014276	RIF1	59	58.642	ENSPNAG00000016685	rif1	59	58.350	Pygocentrus_nattereri
ENSPVAG00000014276	RIF1	95	83.200	ENSRNOG00000054901	Rif1	93	83.200	Rattus_norvegicus
ENSPVAG00000014276	RIF1	95	89.228	ENSRBIG00000003704	RIF1	93	89.228	Rhinopithecus_bieti
ENSPVAG00000014276	RIF1	95	89.431	ENSRROG00000028206	RIF1	93	89.431	Rhinopithecus_roxellana
ENSPVAG00000014276	RIF1	92	91.398	ENSSBOG00000029530	RIF1	92	91.398	Saimiri_boliviensis_boliviensis
ENSPVAG00000014276	RIF1	93	78.586	ENSSHAG00000018552	RIF1	92	81.024	Sarcophilus_harrisii
ENSPVAG00000014276	RIF1	56	59.635	ENSSFOG00015021539	rif1	60	59.919	Scleropages_formosus
ENSPVAG00000014276	RIF1	57	58.896	ENSSMAG00000011704	rif1	52	58.896	Scophthalmus_maximus
ENSPVAG00000014276	RIF1	56	59.592	ENSSDUG00000015632	rif1	59	59.592	Seriola_dumerili
ENSPVAG00000014276	RIF1	59	82.143	ENSSARG00000007161	-	58	82.143	Sorex_araneus
ENSPVAG00000014276	RIF1	79	71.082	ENSSPUG00000003062	RIF1	85	71.082	Sphenodon_punctatus
ENSPVAG00000014276	RIF1	95	90.669	ENSSSCG00000016395	RIF1	93	90.669	Sus_scrofa
ENSPVAG00000014276	RIF1	57	59.674	ENSTRUG00000015808	rif1	59	59.674	Takifugu_rubripes
ENSPVAG00000014276	RIF1	58	59.959	ENSTNIG00000011538	rif1	60	59.959	Tetraodon_nigroviridis
ENSPVAG00000014276	RIF1	78	95.402	ENSTBEG00000016082	RIF1	75	95.402	Tupaia_belangeri
ENSPVAG00000014276	RIF1	95	90.872	ENSTTRG00000011190	RIF1	93	90.872	Tursiops_truncatus
ENSPVAG00000014276	RIF1	85	88.211	ENSUAMG00000026385	RIF1	92	87.352	Ursus_americanus
ENSPVAG00000014276	RIF1	95	87.830	ENSUMAG00000000337	RIF1	93	87.830	Ursus_maritimus
ENSPVAG00000014276	RIF1	95	88.235	ENSVPAG00000002162	RIF1	93	88.235	Vicugna_pacos
ENSPVAG00000014276	RIF1	95	88.032	ENSVVUG00000011293	RIF1	94	88.032	Vulpes_vulpes
ENSPVAG00000014276	RIF1	56	58.078	ENSXMAG00000000506	rif1	57	58.078	Xiphophorus_maculatus