EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000014316 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 35103 bases
Position: chrGeneScaffold_3826:35753-70855
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000013493	PRP1_N	PF06424.12	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000014317	PRPF6-201	2814	-	ENSPVAP00000013493	937 (aa)	-	UPI00018B1B30

Gene Model

Click here to download ENSPVAG00000014316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000014316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000014316	PRPF6	100	91.392	ENSG00000101161	PRPF6	100	91.392	Homo_sapiens
ENSPVAG00000014316	PRPF6	100	86.823	ENSAPOG00000010395	prpf6	96	87.248	Acanthochromis_polyacanthus
ENSPVAG00000014316	PRPF6	100	91.614	ENSAMEG00000001916	PRPF6	99	91.614	Ailuropoda_melanoleuca
ENSPVAG00000014316	PRPF6	100	86.504	ENSACIG00000019862	prpf6	96	86.929	Amphilophus_citrinellus
ENSPVAG00000014316	PRPF6	100	86.716	ENSAOCG00000012988	prpf6	96	87.141	Amphiprion_ocellaris
ENSPVAG00000014316	PRPF6	100	80.234	ENSAPEG00000008301	prpf6	100	80.659	Amphiprion_percula
ENSPVAG00000014316	PRPF6	100	86.397	ENSATEG00000005581	prpf6	96	86.823	Anabas_testudineus
ENSPVAG00000014316	PRPF6	100	91.392	ENSACAG00000006464	PRPF6	95	91.392	Anolis_carolinensis
ENSPVAG00000014316	PRPF6	100	91.923	ENSANAG00000012661	PRPF6	100	91.923	Aotus_nancymaae
ENSPVAG00000014316	PRPF6	100	86.291	ENSACLG00000025875	prpf6	96	86.716	Astatotilapia_calliptera
ENSPVAG00000014316	PRPF6	99	86.596	ENSAMXG00000001929	prpf6	96	87.021	Astyanax_mexicanus
ENSPVAG00000014316	PRPF6	100	92.667	ENSBTAG00000011656	PRPF6	100	92.667	Bos_taurus
ENSPVAG00000014316	PRPF6	100	91.923	ENSCJAG00000010616	PRPF6	100	91.923	Callithrix_jacchus
ENSPVAG00000014316	PRPF6	100	92.880	ENSCAFG00000013165	PRPF6	100	92.880	Canis_familiaris
ENSPVAG00000014316	PRPF6	100	92.880	ENSCAFG00020002050	PRPF6	100	92.880	Canis_lupus_dingo
ENSPVAG00000014316	PRPF6	100	92.667	ENSCHIG00000018187	PRPF6	100	92.667	Capra_hircus
ENSPVAG00000014316	PRPF6	100	92.242	ENSTSYG00000007814	PRPF6	100	92.242	Carlito_syrichta
ENSPVAG00000014316	PRPF6	97	90.949	ENSCAPG00000015077	PRPF6	100	90.949	Cavia_aperea
ENSPVAG00000014316	PRPF6	100	92.455	ENSCPOG00000007518	PRPF6	100	92.455	Cavia_porcellus
ENSPVAG00000014316	PRPF6	100	89.648	ENSCCAG00000024564	PRPF6	100	89.648	Cebus_capucinus
ENSPVAG00000014316	PRPF6	100	91.286	ENSCATG00000037473	PRPF6	100	91.286	Cercocebus_atys
ENSPVAG00000014316	PRPF6	100	90.011	ENSCLAG00000003854	PRPF6	100	90.011	Chinchilla_lanigera
ENSPVAG00000014316	PRPF6	100	86.378	ENSCSAG00000016742	PRPF6	100	86.378	Chlorocebus_sabaeus
ENSPVAG00000014316	PRPF6	85	73.821	ENSCHOG00000003315	-	98	73.388	Choloepus_hoffmanni
ENSPVAG00000014316	PRPF6	100	90.967	ENSCPBG00000013964	PRPF6	96	91.392	Chrysemys_picta_bellii
ENSPVAG00000014316	PRPF6	99	69.450	ENSCING00000008817	-	99	69.450	Ciona_intestinalis
ENSPVAG00000014316	PRPF6	100	91.286	ENSCANG00000038230	PRPF6	100	91.286	Colobus_angolensis_palliatus
ENSPVAG00000014316	PRPF6	100	92.561	ENSCGRG00001022666	Prpf6	100	92.561	Cricetulus_griseus_chok1gshd
ENSPVAG00000014316	PRPF6	100	80.871	ENSCSEG00000018561	prpf6	100	81.296	Cynoglossus_semilaevis
ENSPVAG00000014316	PRPF6	100	86.929	ENSCVAG00000010550	prpf6	96	87.354	Cyprinodon_variegatus
ENSPVAG00000014316	PRPF6	100	86.397	ENSDARG00000091367	prpf6	99	86.823	Danio_rerio
ENSPVAG00000014316	PRPF6	100	92.136	ENSDNOG00000040544	PRPF6	100	92.136	Dasypus_novemcinctus
ENSPVAG00000014316	PRPF6	91	91.472	ENSDORG00000005406	Prpf6	100	91.472	Dipodomys_ordii
ENSPVAG00000014316	PRPF6	99	67.815	FBgn0036828	CG6841	98	68.133	Drosophila_melanogaster
ENSPVAG00000014316	PRPF6	85	89.916	ENSETEG00000004447	PRPF6	85	89.381	Echinops_telfairi
ENSPVAG00000014316	PRPF6	99	81.760	ENSEBUG00000008835	prpf6	99	81.760	Eptatretus_burgeri
ENSPVAG00000014316	PRPF6	100	93.305	ENSEASG00005023115	PRPF6	100	93.305	Equus_asinus_asinus
ENSPVAG00000014316	PRPF6	100	89.904	ENSECAG00000013983	PRPF6	100	89.904	Equus_caballus
ENSPVAG00000014316	PRPF6	87	100.000	ENSEEUG00000000180	PRPF6	79	100.000	Erinaceus_europaeus
ENSPVAG00000014316	PRPF6	100	85.547	ENSELUG00000001945	prpf6	93	85.547	Esox_lucius
ENSPVAG00000014316	PRPF6	100	92.986	ENSFCAG00000001183	PRPF6	100	92.986	Felis_catus
ENSPVAG00000014316	PRPF6	100	84.060	ENSFALG00000006046	-	97	84.060	Ficedula_albicollis
ENSPVAG00000014316	PRPF6	100	91.286	ENSFALG00000010326	-	97	91.286	Ficedula_albicollis
ENSPVAG00000014316	PRPF6	100	90.967	ENSFDAG00000006451	PRPF6	100	91.950	Fukomys_damarensis
ENSPVAG00000014316	PRPF6	100	87.354	ENSFHEG00000000560	prpf6	96	87.354	Fundulus_heteroclitus
ENSPVAG00000014316	PRPF6	100	83.298	ENSGMOG00000015622	prpf6	99	83.298	Gadus_morhua
ENSPVAG00000014316	PRPF6	100	91.286	ENSGALG00000006001	PRPF6	100	91.286	Gallus_gallus
ENSPVAG00000014316	PRPF6	100	82.253	ENSGAFG00000021109	prpf6	96	82.678	Gambusia_affinis
ENSPVAG00000014316	PRPF6	100	85.228	ENSGACG00000002576	prpf6	99	85.228	Gasterosteus_aculeatus
ENSPVAG00000014316	PRPF6	100	90.861	ENSGAGG00000008653	PRPF6	96	91.286	Gopherus_agassizii
ENSPVAG00000014316	PRPF6	100	91.392	ENSGGOG00000016876	PRPF6	100	91.392	Gorilla_gorilla
ENSPVAG00000014316	PRPF6	100	86.291	ENSHBUG00000004496	prpf6	96	86.716	Haplochromis_burtoni
ENSPVAG00000014316	PRPF6	100	92.242	ENSHGLG00000009222	PRPF6	100	92.242	Heterocephalus_glaber_female
ENSPVAG00000014316	PRPF6	97	92.039	ENSHGLG00100016600	PRPF6	100	92.039	Heterocephalus_glaber_male
ENSPVAG00000014316	PRPF6	100	85.335	ENSHCOG00000011513	prpf6	96	85.760	Hippocampus_comes
ENSPVAG00000014316	PRPF6	100	87.248	ENSIPUG00000004912	prpf6	96	87.248	Ictalurus_punctatus
ENSPVAG00000014316	PRPF6	100	89.915	ENSSTOG00000002922	PRPF6	100	89.703	Ictidomys_tridecemlineatus
ENSPVAG00000014316	PRPF6	100	92.455	ENSJJAG00000000836	Prpf6	100	92.455	Jaculus_jaculus
ENSPVAG00000014316	PRPF6	100	86.397	ENSKMAG00000017800	prpf6	96	86.823	Kryptolebias_marmoratus
ENSPVAG00000014316	PRPF6	100	85.972	ENSLBEG00000012582	prpf6	96	85.972	Labrus_bergylta
ENSPVAG00000014316	PRPF6	100	88.417	ENSLOCG00000004827	prpf6	96	87.460	Lepisosteus_oculatus
ENSPVAG00000014316	PRPF6	100	91.923	ENSLAFG00000005272	PRPF6	100	91.923	Loxodonta_africana
ENSPVAG00000014316	PRPF6	100	91.286	ENSMFAG00000037542	PRPF6	100	91.286	Macaca_fascicularis
ENSPVAG00000014316	PRPF6	100	85.866	ENSMMUG00000015558	PRPF6	98	95.818	Macaca_mulatta
ENSPVAG00000014316	PRPF6	100	78.049	ENSMNEG00000045555	PRPF6	100	78.049	Macaca_nemestrina
ENSPVAG00000014316	PRPF6	100	86.504	ENSMAMG00000010718	prpf6	96	86.929	Mastacembelus_armatus
ENSPVAG00000014316	PRPF6	100	85.987	ENSMZEG00005015261	-	99	86.412	Maylandia_zebra
ENSPVAG00000014316	PRPF6	92	85.912	ENSMZEG00005026539	prpf6	98	85.912	Maylandia_zebra
ENSPVAG00000014316	PRPF6	97	91.058	ENSMGAG00000006634	PRPF6	100	91.058	Meleagris_gallopavo
ENSPVAG00000014316	PRPF6	100	92.667	ENSMAUG00000013969	Prpf6	100	92.667	Mesocricetus_auratus
ENSPVAG00000014316	PRPF6	87	91.484	ENSMICG00000017793	PRPF6	99	91.484	Microcebus_murinus
ENSPVAG00000014316	PRPF6	100	92.774	ENSMOCG00000001701	Prpf6	100	92.774	Microtus_ochrogaster
ENSPVAG00000014316	PRPF6	100	85.654	ENSMMOG00000020419	prpf6	100	86.079	Mola_mola
ENSPVAG00000014316	PRPF6	99	92.848	ENSMODG00000017051	PRPF6	99	92.848	Monodelphis_domestica
ENSPVAG00000014316	PRPF6	99	86.574	ENSMALG00000000089	prpf6	100	86.574	Monopterus_albus
ENSPVAG00000014316	PRPF6	100	85.972	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSPVAG00000014316	PRPF6	100	92.667	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSPVAG00000014316	PRPF6	100	92.667	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSPVAG00000014316	PRPF6	100	92.667	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSPVAG00000014316	PRPF6	93	92.014	ENSMPUG00000008673	PRPF6	99	92.014	Mustela_putorius_furo
ENSPVAG00000014316	PRPF6	100	92.561	ENSNGAG00000003365	Prpf6	100	92.561	Nannospalax_galili
ENSPVAG00000014316	PRPF6	100	86.291	ENSNBRG00000015025	prpf6	96	86.716	Neolamprologus_brichardi
ENSPVAG00000014316	PRPF6	100	91.286	ENSNLEG00000010208	PRPF6	100	91.286	Nomascus_leucogenys
ENSPVAG00000014316	PRPF6	100	87.683	ENSMEUG00000009824	-	90	87.683	Notamacropus_eugenii
ENSPVAG00000014316	PRPF6	100	86.044	ENSODEG00000004841	PRPF6	100	86.044	Octodon_degus
ENSPVAG00000014316	PRPF6	100	86.185	ENSONIG00000017406	prpf6	96	86.610	Oreochromis_niloticus
ENSPVAG00000014316	PRPF6	100	91.711	ENSOANG00000004920	PRPF6	100	91.711	Ornithorhynchus_anatinus
ENSPVAG00000014316	PRPF6	99	90.987	ENSOCUG00000014151	PRPF6	100	90.987	Oryctolagus_cuniculus
ENSPVAG00000014316	PRPF6	100	86.079	ENSORLG00000009592	prpf6	96	86.079	Oryzias_latipes
ENSPVAG00000014316	PRPF6	100	86.185	ENSORLG00020001458	prpf6	96	86.185	Oryzias_latipes_hni
ENSPVAG00000014316	PRPF6	100	86.185	ENSORLG00015018762	prpf6	96	86.185	Oryzias_latipes_hsok
ENSPVAG00000014316	PRPF6	100	86.079	ENSOMEG00000012174	prpf6	96	86.504	Oryzias_melastigma
ENSPVAG00000014316	PRPF6	100	84.820	ENSOGAG00000007573	PRPF6	100	84.820	Otolemur_garnettii
ENSPVAG00000014316	PRPF6	100	92.242	ENSOARG00000008776	PRPF6	99	92.242	Ovis_aries
ENSPVAG00000014316	PRPF6	100	91.392	ENSPPAG00000008686	PRPF6	100	91.392	Pan_paniscus
ENSPVAG00000014316	PRPF6	100	92.986	ENSPPRG00000008497	PRPF6	100	92.986	Panthera_pardus
ENSPVAG00000014316	PRPF6	97	92.803	ENSPTIG00000011184	PRPF6	97	92.803	Panthera_tigris_altaica
ENSPVAG00000014316	PRPF6	100	91.392	ENSPTRG00000013765	PRPF6	100	91.392	Pan_troglodytes
ENSPVAG00000014316	PRPF6	100	90.755	ENSPANG00000024135	PRPF6	100	90.755	Papio_anubis
ENSPVAG00000014316	PRPF6	100	88.310	ENSPKIG00000005627	prpf6	99	88.735	Paramormyrops_kingsleyae
ENSPVAG00000014316	PRPF6	94	91.043	ENSPSIG00000007717	PRPF6	100	91.043	Pelodiscus_sinensis
ENSPVAG00000014316	PRPF6	100	84.272	ENSPMGG00000008925	prpf6	96	84.485	Periophthalmus_magnuspinnatus
ENSPVAG00000014316	PRPF6	100	92.561	ENSPEMG00000016036	Prpf6	100	92.561	Peromyscus_maniculatus_bairdii
ENSPVAG00000014316	PRPF6	99	83.528	ENSPMAG00000006144	prpf6	99	83.528	Petromyzon_marinus
ENSPVAG00000014316	PRPF6	100	91.923	ENSPCIG00000017909	PRPF6	100	91.923	Phascolarctos_cinereus
ENSPVAG00000014316	PRPF6	100	86.929	ENSPFOG00000006431	prpf6	96	87.354	Poecilia_formosa
ENSPVAG00000014316	PRPF6	100	86.823	ENSPLAG00000005974	prpf6	96	87.248	Poecilia_latipinna
ENSPVAG00000014316	PRPF6	100	87.035	ENSPMEG00000009977	prpf6	96	87.460	Poecilia_mexicana
ENSPVAG00000014316	PRPF6	100	86.929	ENSPREG00000017993	prpf6	92	87.354	Poecilia_reticulata
ENSPVAG00000014316	PRPF6	100	90.861	ENSPPYG00000011256	PRPF6	100	90.861	Pongo_abelii
ENSPVAG00000014316	PRPF6	88	96.330	ENSPCAG00000006536	PRPF6	88	96.330	Procavia_capensis
ENSPVAG00000014316	PRPF6	100	92.242	ENSPCOG00000016881	PRPF6	100	92.242	Propithecus_coquereli
ENSPVAG00000014316	PRPF6	100	70.064	ENSPNYG00000001939	prpf6	96	75.133	Pundamilia_nyererei
ENSPVAG00000014316	PRPF6	100	87.141	ENSPNAG00000015606	prpf6	96	87.566	Pygocentrus_nattereri
ENSPVAG00000014316	PRPF6	100	92.561	ENSRNOG00000051498	Prpf6	100	92.561	Rattus_norvegicus
ENSPVAG00000014316	PRPF6	100	91.286	ENSRBIG00000043613	PRPF6	100	91.286	Rhinopithecus_bieti
ENSPVAG00000014316	PRPF6	100	89.066	ENSRROG00000040969	PRPF6	95	96.182	Rhinopithecus_roxellana
ENSPVAG00000014316	PRPF6	84	91.818	ENSSBOG00000020632	PRPF6	91	91.455	Saimiri_boliviensis_boliviensis
ENSPVAG00000014316	PRPF6	100	91.923	ENSSHAG00000016810	PRPF6	100	91.923	Sarcophilus_harrisii
ENSPVAG00000014316	PRPF6	99	88.292	ENSSFOG00015020859	prpf6	100	88.722	Scleropages_formosus
ENSPVAG00000014316	PRPF6	100	85.760	ENSSMAG00000008112	prpf6	96	85.760	Scophthalmus_maximus
ENSPVAG00000014316	PRPF6	100	86.397	ENSSDUG00000016142	prpf6	96	86.823	Seriola_dumerili
ENSPVAG00000014316	PRPF6	100	86.397	ENSSLDG00000025283	prpf6	100	83.422	Seriola_lalandi_dorsalis
ENSPVAG00000014316	PRPF6	94	89.796	ENSSPUG00000018260	PRPF6	100	89.796	Sphenodon_punctatus
ENSPVAG00000014316	PRPF6	100	86.397	ENSSPAG00000015850	prpf6	96	86.823	Stegastes_partitus
ENSPVAG00000014316	PRPF6	100	92.561	ENSSSCG00000029119	PRPF6	100	92.063	Sus_scrofa
ENSPVAG00000014316	PRPF6	100	91.392	ENSTGUG00000007221	PRPF6	99	91.392	Taeniopygia_guttata
ENSPVAG00000014316	PRPF6	100	85.760	ENSTRUG00000002920	prpf6	96	86.185	Takifugu_rubripes
ENSPVAG00000014316	PRPF6	100	79.704	ENSTNIG00000017873	prpf6	100	80.127	Tetraodon_nigroviridis
ENSPVAG00000014316	PRPF6	86	97.790	ENSTBEG00000005348	PRPF6	79	97.790	Tupaia_belangeri
ENSPVAG00000014316	PRPF6	100	92.349	ENSTTRG00000013068	PRPF6	100	92.349	Tursiops_truncatus
ENSPVAG00000014316	PRPF6	98	90.870	ENSUMAG00000021631	PRPF6	98	90.543	Ursus_maritimus
ENSPVAG00000014316	PRPF6	100	92.880	ENSVVUG00000014948	PRPF6	100	92.880	Vulpes_vulpes
ENSPVAG00000014316	PRPF6	100	89.373	ENSXETG00000012054	prpf6	97	89.798	Xenopus_tropicalis
ENSPVAG00000014316	PRPF6	100	87.035	ENSXCOG00000008082	prpf6	96	87.460	Xiphophorus_couchianus
ENSPVAG00000014316	PRPF6	100	87.035	ENSXMAG00000015581	prpf6	96	87.460	Xiphophorus_maculatus