EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000014468 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 29408 bases
Position: chrGeneScaffold_1510:199935-229342
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000013639	POP1	PF06978.11	3.1e-38	1	2
ENSPVAP00000013639	POP1	PF06978.11	3.1e-38	2	2
ENSPVAP00000013639	POPLD	PF08170.12	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000014470	POP1-201	3045	-	ENSPVAP00000013639	1014 (aa)	-	UPI00018B3D46

Gene Model

Click here to download ENSPVAG00000014468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000014468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000014468	POP1	100	82.732	ENSG00000104356	POP1	100	85.792	Homo_sapiens
ENSPVAG00000014468	POP1	100	48.421	ENSAPOG00000008198	pop1	100	47.569	Acanthochromis_polyacanthus
ENSPVAG00000014468	POP1	100	81.250	ENSAMEG00000000556	POP1	100	81.250	Ailuropoda_melanoleuca
ENSPVAG00000014468	POP1	90	48.877	ENSACIG00000004169	POP1	100	45.560	Amphilophus_citrinellus
ENSPVAG00000014468	POP1	100	48.057	ENSAOCG00000010991	pop1	100	47.583	Amphiprion_ocellaris
ENSPVAG00000014468	POP1	91	46.577	ENSAPEG00000007607	pop1	96	47.095	Amphiprion_percula
ENSPVAG00000014468	POP1	100	45.739	ENSATEG00000024814	POP1	100	45.949	Anabas_testudineus
ENSPVAG00000014468	POP1	92	62.286	ENSAPLG00000014418	POP1	99	61.925	Anas_platyrhynchos
ENSPVAG00000014468	POP1	100	55.126	ENSACAG00000016083	POP1	100	54.932	Anolis_carolinensis
ENSPVAG00000014468	POP1	88	86.647	ENSANAG00000026360	POP1	99	86.647	Aotus_nancymaae
ENSPVAG00000014468	POP1	100	47.182	ENSACLG00000010951	pop1	100	46.952	Astatotilapia_calliptera
ENSPVAG00000014468	POP1	100	45.557	ENSAMXG00000014483	POP1	100	45.276	Astyanax_mexicanus
ENSPVAG00000014468	POP1	100	81.238	ENSBTAG00000012596	POP1	100	81.238	Bos_taurus
ENSPVAG00000014468	POP1	100	80.390	ENSCJAG00000015567	POP1	100	80.390	Callithrix_jacchus
ENSPVAG00000014468	POP1	100	81.434	ENSCAFG00000000469	POP1	100	81.384	Canis_familiaris
ENSPVAG00000014468	POP1	100	83.006	ENSCAFG00020026765	POP1	100	83.006	Canis_lupus_dingo
ENSPVAG00000014468	POP1	100	81.256	ENSCHIG00000017066	POP1	100	81.256	Capra_hircus
ENSPVAG00000014468	POP1	100	80.878	ENSTSYG00000003097	POP1	100	80.878	Carlito_syrichta
ENSPVAG00000014468	POP1	100	75.922	ENSCAPG00000007251	POP1	100	75.922	Cavia_aperea
ENSPVAG00000014468	POP1	100	77.680	ENSCPOG00000002901	POP1	100	77.680	Cavia_porcellus
ENSPVAG00000014468	POP1	100	80.878	ENSCCAG00000018939	POP1	94	87.627	Cebus_capucinus
ENSPVAG00000014468	POP1	100	81.756	ENSCATG00000040916	POP1	100	81.756	Cercocebus_atys
ENSPVAG00000014468	POP1	100	78.049	ENSCLAG00000007208	POP1	97	78.049	Chinchilla_lanigera
ENSPVAG00000014468	POP1	90	82.124	ENSCSAG00000012340	POP1	99	82.124	Chlorocebus_sabaeus
ENSPVAG00000014468	POP1	95	78.726	ENSCHOG00000011432	POP1	99	78.726	Choloepus_hoffmanni
ENSPVAG00000014468	POP1	100	64.873	ENSCPBG00000006373	POP1	100	64.160	Chrysemys_picta_bellii
ENSPVAG00000014468	POP1	82	39.200	ENSCING00000008323	-	76	37.319	Ciona_intestinalis
ENSPVAG00000014468	POP1	100	81.951	ENSCANG00000001647	POP1	100	81.951	Colobus_angolensis_palliatus
ENSPVAG00000014468	POP1	100	74.951	ENSCGRG00001017308	Pop1	100	74.854	Cricetulus_griseus_chok1gshd
ENSPVAG00000014468	POP1	100	69.786	ENSCGRG00000010824	Pop1	100	69.688	Cricetulus_griseus_crigri
ENSPVAG00000014468	POP1	100	45.359	ENSCSEG00000008737	POP1	100	45.307	Cynoglossus_semilaevis
ENSPVAG00000014468	POP1	100	47.404	ENSCVAG00000022248	pop1	100	46.917	Cyprinodon_variegatus
ENSPVAG00000014468	POP1	100	76.376	ENSDNOG00000019974	POP1	100	76.376	Dasypus_novemcinctus
ENSPVAG00000014468	POP1	100	70.233	ENSDORG00000015384	Pop1	100	69.455	Dipodomys_ordii
ENSPVAG00000014468	POP1	61	33.175	FBgn0026702	l(1)G0045	69	32.070	Drosophila_melanogaster
ENSPVAG00000014468	POP1	89	69.486	ENSETEG00000007839	POP1	88	69.486	Echinops_telfairi
ENSPVAG00000014468	POP1	100	85.363	ENSEASG00005003189	POP1	98	85.363	Equus_asinus_asinus
ENSPVAG00000014468	POP1	100	85.167	ENSECAG00000024236	POP1	100	85.167	Equus_caballus
ENSPVAG00000014468	POP1	67	77.143	ENSEEUG00000003050	-	70	77.143	Erinaceus_europaeus
ENSPVAG00000014468	POP1	100	46.884	ENSELUG00000003526	pop1	100	47.053	Esox_lucius
ENSPVAG00000014468	POP1	100	84.578	ENSFCAG00000002168	POP1	100	84.578	Felis_catus
ENSPVAG00000014468	POP1	100	58.685	ENSFALG00000005711	POP1	100	59.274	Ficedula_albicollis
ENSPVAG00000014468	POP1	100	78.927	ENSFDAG00000017068	POP1	100	78.927	Fukomys_damarensis
ENSPVAG00000014468	POP1	100	46.391	ENSFHEG00000019518	pop1	100	45.962	Fundulus_heteroclitus
ENSPVAG00000014468	POP1	92	46.074	ENSGMOG00000000659	POP1	97	46.130	Gadus_morhua
ENSPVAG00000014468	POP1	100	47.578	ENSGAFG00000019770	POP1	100	47.087	Gambusia_affinis
ENSPVAG00000014468	POP1	100	46.058	ENSGACG00000003499	pop1	100	45.865	Gasterosteus_aculeatus
ENSPVAG00000014468	POP1	100	63.010	ENSGAGG00000011737	POP1	98	62.682	Gopherus_agassizii
ENSPVAG00000014468	POP1	100	82.634	ENSGGOG00000003176	POP1	100	82.634	Gorilla_gorilla
ENSPVAG00000014468	POP1	100	47.154	ENSHBUG00000021583	pop1	100	46.958	Haplochromis_burtoni
ENSPVAG00000014468	POP1	100	79.024	ENSHGLG00000006029	POP1	100	79.024	Heterocephalus_glaber_female
ENSPVAG00000014468	POP1	100	79.024	ENSHGLG00100016879	POP1	100	79.024	Heterocephalus_glaber_male
ENSPVAG00000014468	POP1	91	49.413	ENSHCOG00000013888	pop1	97	49.151	Hippocampus_comes
ENSPVAG00000014468	POP1	100	44.628	ENSIPUG00000018336	pop1	91	65.823	Ictalurus_punctatus
ENSPVAG00000014468	POP1	100	80.683	ENSSTOG00000011455	POP1	97	80.683	Ictidomys_tridecemlineatus
ENSPVAG00000014468	POP1	100	73.951	ENSJJAG00000013325	Pop1	100	73.073	Jaculus_jaculus
ENSPVAG00000014468	POP1	100	46.884	ENSKMAG00000001346	POP1	100	46.917	Kryptolebias_marmoratus
ENSPVAG00000014468	POP1	100	45.490	ENSLBEG00000024457	POP1	100	45.578	Labrus_bergylta
ENSPVAG00000014468	POP1	93	55.623	ENSLACG00000012498	POP1	99	55.285	Latimeria_chalumnae
ENSPVAG00000014468	POP1	100	51.707	ENSLOCG00000009817	POP1	100	50.879	Lepisosteus_oculatus
ENSPVAG00000014468	POP1	100	81.031	ENSLAFG00000010770	POP1	100	81.031	Loxodonta_africana
ENSPVAG00000014468	POP1	100	81.756	ENSMFAG00000000347	POP1	100	81.756	Macaca_fascicularis
ENSPVAG00000014468	POP1	100	81.366	ENSMNEG00000036870	POP1	100	81.366	Macaca_nemestrina
ENSPVAG00000014468	POP1	100	81.659	ENSMLEG00000034986	POP1	100	81.659	Mandrillus_leucophaeus
ENSPVAG00000014468	POP1	100	46.272	ENSMAMG00000004040	pop1	100	46.300	Mastacembelus_armatus
ENSPVAG00000014468	POP1	100	47.148	ENSMZEG00005025448	pop1	100	46.952	Maylandia_zebra
ENSPVAG00000014468	POP1	100	57.608	ENSMGAG00000012167	POP1	100	57.759	Meleagris_gallopavo
ENSPVAG00000014468	POP1	100	74.854	ENSMAUG00000017537	Pop1	100	74.172	Mesocricetus_auratus
ENSPVAG00000014468	POP1	100	82.732	ENSMICG00000004361	POP1	100	82.732	Microcebus_murinus
ENSPVAG00000014468	POP1	100	73.145	ENSMOCG00000006356	Pop1	100	73.438	Microtus_ochrogaster
ENSPVAG00000014468	POP1	100	43.750	ENSMMOG00000018242	pop1	100	43.327	Mola_mola
ENSPVAG00000014468	POP1	100	67.534	ENSMODG00000006561	POP1	100	67.372	Monodelphis_domestica
ENSPVAG00000014468	POP1	100	47.182	ENSMALG00000012621	POP1	100	47.177	Monopterus_albus
ENSPVAG00000014468	POP1	100	74.146	MGP_CAROLIEiJ_G0019726	Pop1	100	74.146	Mus_caroli
ENSPVAG00000014468	POP1	100	74.439	ENSMUSG00000022325	Pop1	100	74.439	Mus_musculus
ENSPVAG00000014468	POP1	100	74.439	MGP_PahariEiJ_G0019735	Pop1	100	74.341	Mus_pahari
ENSPVAG00000014468	POP1	100	73.854	MGP_SPRETEiJ_G0020622	Pop1	100	73.854	Mus_spretus
ENSPVAG00000014468	POP1	100	82.681	ENSMPUG00000015250	POP1	100	82.681	Mustela_putorius_furo
ENSPVAG00000014468	POP1	100	79.706	ENSMLUG00000010204	POP1	100	79.804	Myotis_lucifugus
ENSPVAG00000014468	POP1	100	78.537	ENSNGAG00000001582	Pop1	100	78.537	Nannospalax_galili
ENSPVAG00000014468	POP1	89	47.747	ENSNBRG00000002356	pop1	94	47.609	Neolamprologus_brichardi
ENSPVAG00000014468	POP1	100	81.659	ENSNLEG00000002541	POP1	100	81.659	Nomascus_leucogenys
ENSPVAG00000014468	POP1	93	59.958	ENSMEUG00000003118	POP1	98	59.896	Notamacropus_eugenii
ENSPVAG00000014468	POP1	100	75.610	ENSOPRG00000007667	POP1	100	75.024	Ochotona_princeps
ENSPVAG00000014468	POP1	100	77.313	ENSODEG00000003984	POP1	100	77.313	Octodon_degus
ENSPVAG00000014468	POP1	100	47.734	ENSONIG00000016445	pop1	100	47.536	Oreochromis_niloticus
ENSPVAG00000014468	POP1	59	68.712	ENSOANG00000001278	-	94	68.712	Ornithorhynchus_anatinus
ENSPVAG00000014468	POP1	100	78.544	ENSOCUG00000017400	POP1	100	78.544	Oryctolagus_cuniculus
ENSPVAG00000014468	POP1	92	48.214	ENSORLG00000002839	pop1	100	46.377	Oryzias_latipes
ENSPVAG00000014468	POP1	90	48.657	ENSORLG00020022450	POP1	96	48.332	Oryzias_latipes_hni
ENSPVAG00000014468	POP1	100	46.635	ENSORLG00015012746	POP1	100	46.473	Oryzias_latipes_hsok
ENSPVAG00000014468	POP1	100	47.363	ENSOMEG00000006915	pop1	99	47.128	Oryzias_melastigma
ENSPVAG00000014468	POP1	100	79.512	ENSOGAG00000001466	POP1	100	79.415	Otolemur_garnettii
ENSPVAG00000014468	POP1	100	82.634	ENSPPAG00000018410	POP1	100	82.634	Pan_paniscus
ENSPVAG00000014468	POP1	100	84.004	ENSPPRG00000005002	POP1	100	84.004	Panthera_pardus
ENSPVAG00000014468	POP1	100	84.200	ENSPTIG00000016527	POP1	100	84.200	Panthera_tigris_altaica
ENSPVAG00000014468	POP1	100	82.634	ENSPTRG00000020458	POP1	100	82.634	Pan_troglodytes
ENSPVAG00000014468	POP1	100	81.463	ENSPANG00000009704	POP1	100	81.463	Papio_anubis
ENSPVAG00000014468	POP1	100	49.516	ENSPKIG00000016325	POP1	100	49.133	Paramormyrops_kingsleyae
ENSPVAG00000014468	POP1	100	62.099	ENSPSIG00000012343	POP1	100	61.919	Pelodiscus_sinensis
ENSPVAG00000014468	POP1	90	49.028	ENSPMGG00000022253	POP1	95	48.712	Periophthalmus_magnuspinnatus
ENSPVAG00000014468	POP1	99	74.280	ENSPEMG00000023633	Pop1	100	74.280	Peromyscus_maniculatus_bairdii
ENSPVAG00000014468	POP1	90	43.487	ENSPMAG00000003209	POP1	100	43.323	Petromyzon_marinus
ENSPVAG00000014468	POP1	100	66.731	ENSPCIG00000012216	POP1	100	66.957	Phascolarctos_cinereus
ENSPVAG00000014468	POP1	100	48.112	ENSPFOG00000012490	POP1	100	47.292	Poecilia_formosa
ENSPVAG00000014468	POP1	100	47.868	ENSPLAG00000004646	POP1	100	47.047	Poecilia_latipinna
ENSPVAG00000014468	POP1	100	47.642	ENSPMEG00000019592	POP1	100	46.957	Poecilia_mexicana
ENSPVAG00000014468	POP1	100	47.919	ENSPREG00000020951	POP1	100	47.430	Poecilia_reticulata
ENSPVAG00000014468	POP1	100	82.146	ENSPPYG00000018777	POP1	100	82.146	Pongo_abelii
ENSPVAG00000014468	POP1	100	75.146	ENSPCAG00000016662	POP1	100	74.366	Procavia_capensis
ENSPVAG00000014468	POP1	100	83.707	ENSPCOG00000019420	POP1	100	83.707	Propithecus_coquereli
ENSPVAG00000014468	POP1	89	48.439	ENSPNYG00000004476	pop1	95	48.453	Pundamilia_nyererei
ENSPVAG00000014468	POP1	100	45.000	ENSPNAG00000000265	pop1	100	42.976	Pygocentrus_nattereri
ENSPVAG00000014468	POP1	100	74.439	ENSRNOG00000005243	Pop1	100	74.439	Rattus_norvegicus
ENSPVAG00000014468	POP1	100	81.659	ENSRBIG00000007996	POP1	100	81.659	Rhinopithecus_bieti
ENSPVAG00000014468	POP1	100	81.854	ENSRROG00000012334	POP1	100	81.854	Rhinopithecus_roxellana
ENSPVAG00000014468	POP1	99	81.441	ENSSBOG00000020830	POP1	100	81.441	Saimiri_boliviensis_boliviensis
ENSPVAG00000014468	POP1	100	66.441	ENSSHAG00000000296	POP1	100	66.441	Sarcophilus_harrisii
ENSPVAG00000014468	POP1	100	47.981	ENSSFOG00015007429	pop1	99	47.788	Scleropages_formosus
ENSPVAG00000014468	POP1	85	51.302	ENSSMAG00000010467	POP1	98	47.461	Scophthalmus_maximus
ENSPVAG00000014468	POP1	100	46.051	ENSSDUG00000007817	POP1	100	45.619	Seriola_dumerili
ENSPVAG00000014468	POP1	100	46.117	ENSSLDG00000012565	POP1	100	46.212	Seriola_lalandi_dorsalis
ENSPVAG00000014468	POP1	100	58.382	ENSSPUG00000003550	-	100	58.333	Sphenodon_punctatus
ENSPVAG00000014468	POP1	90	49.512	ENSSPAG00000014955	pop1	94	48.862	Stegastes_partitus
ENSPVAG00000014468	POP1	100	81.532	ENSSSCG00000006078	POP1	100	81.532	Sus_scrofa
ENSPVAG00000014468	POP1	92	55.983	ENSTGUG00000012011	-	100	55.983	Taeniopygia_guttata
ENSPVAG00000014468	POP1	89	48.587	ENSTRUG00000010856	pop1	92	48.478	Takifugu_rubripes
ENSPVAG00000014468	POP1	93	48.497	ENSTNIG00000013297	pop1	99	48.287	Tetraodon_nigroviridis
ENSPVAG00000014468	POP1	95	76.386	ENSTBEG00000014214	POP1	99	76.386	Tupaia_belangeri
ENSPVAG00000014468	POP1	100	80.452	ENSTTRG00000016071	POP1	100	80.452	Tursiops_truncatus
ENSPVAG00000014468	POP1	99	78.550	ENSUAMG00000017309	POP1	100	78.550	Ursus_americanus
ENSPVAG00000014468	POP1	100	80.818	ENSUMAG00000016952	POP1	100	88.259	Ursus_maritimus
ENSPVAG00000014468	POP1	83	87.591	ENSVPAG00000008278	POP1	82	87.591	Vicugna_pacos
ENSPVAG00000014468	POP1	100	83.006	ENSVVUG00000010994	POP1	100	83.006	Vulpes_vulpes
ENSPVAG00000014468	POP1	100	43.587	ENSXCOG00000017043	POP1	100	42.788	Xiphophorus_couchianus
ENSPVAG00000014468	POP1	100	47.303	ENSXMAG00000002472	POP1	100	46.911	Xiphophorus_maculatus