EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000014798 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 57331 bases
Position: chrGeneScaffold_2881:28611-85941
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000013953	SpoU_methylase	PF00588.19	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000014804	TARBP1-201	4803	-	ENSPVAP00000013953	1601 (aa)	-	UPI00018B1CD6

Gene Model

Click here to download ENSPVAG00000014798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000014798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000014798	TARBP1	99	67.787	ENSG00000059588	TARBP1	99	67.752	Homo_sapiens
ENSPVAG00000014798	TARBP1	86	39.522	ENSAPOG00000016419	si:dkey-85a20.4	82	41.741	Acanthochromis_polyacanthus
ENSPVAG00000014798	TARBP1	85	68.636	ENSAMEG00000003359	TARBP1	99	68.636	Ailuropoda_melanoleuca
ENSPVAG00000014798	TARBP1	92	38.224	ENSATEG00000020266	si:dkey-85a20.4	81	59.298	Anabas_testudineus
ENSPVAG00000014798	TARBP1	84	55.036	ENSAPLG00000007666	TARBP1	99	56.217	Anas_platyrhynchos
ENSPVAG00000014798	TARBP1	98	49.625	ENSACAG00000001142	TARBP1	98	49.156	Anolis_carolinensis
ENSPVAG00000014798	TARBP1	87	64.003	ENSANAG00000022031	TARBP1	90	64.376	Aotus_nancymaae
ENSPVAG00000014798	TARBP1	99	68.619	ENSBTAG00000004517	TARBP1	99	69.051	Bos_taurus
ENSPVAG00000014798	TARBP1	99	67.752	ENSCJAG00000018155	TARBP1	99	67.362	Callithrix_jacchus
ENSPVAG00000014798	TARBP1	88	69.064	ENSCAFG00000011533	TARBP1	99	69.144	Canis_familiaris
ENSPVAG00000014798	TARBP1	99	69.533	ENSCAFG00020027141	TARBP1	99	69.595	Canis_lupus_dingo
ENSPVAG00000014798	TARBP1	99	68.389	ENSCHIG00000011437	TARBP1	99	68.819	Capra_hircus
ENSPVAG00000014798	TARBP1	81	68.482	ENSTSYG00000010382	TARBP1	97	68.482	Carlito_syrichta
ENSPVAG00000014798	TARBP1	79	57.254	ENSCAPG00000010831	TARBP1	92	64.415	Cavia_aperea
ENSPVAG00000014798	TARBP1	99	64.860	ENSCPOG00000013995	TARBP1	99	65.607	Cavia_porcellus
ENSPVAG00000014798	TARBP1	99	67.752	ENSCCAG00000037278	TARBP1	99	67.301	Cebus_capucinus
ENSPVAG00000014798	TARBP1	99	67.831	ENSCATG00000011754	TARBP1	99	67.647	Cercocebus_atys
ENSPVAG00000014798	TARBP1	84	82.500	ENSCLAG00000003655	TARBP1	99	82.500	Chinchilla_lanigera
ENSPVAG00000014798	TARBP1	80	67.907	ENSCSAG00000010100	TARBP1	99	67.907	Chlorocebus_sabaeus
ENSPVAG00000014798	TARBP1	94	53.403	ENSCPBG00000005587	TARBP1	98	55.778	Chrysemys_picta_bellii
ENSPVAG00000014798	TARBP1	85	67.399	ENSCANG00000034343	TARBP1	99	67.399	Colobus_angolensis_palliatus
ENSPVAG00000014798	TARBP1	99	62.578	ENSCGRG00001016690	Tarbp1	99	61.706	Cricetulus_griseus_chok1gshd
ENSPVAG00000014798	TARBP1	90	63.278	ENSCGRG00000016893	Tarbp1	95	63.759	Cricetulus_griseus_crigri
ENSPVAG00000014798	TARBP1	88	57.929	ENSCSEG00000005255	si:dkey-85a20.4	74	60.702	Cynoglossus_semilaevis
ENSPVAG00000014798	TARBP1	99	36.638	ENSDARG00000079055	si:dkey-85a20.4	87	60.215	Danio_rerio
ENSPVAG00000014798	TARBP1	99	67.010	ENSDNOG00000008637	TARBP1	99	67.131	Dasypus_novemcinctus
ENSPVAG00000014798	TARBP1	81	63.748	ENSDORG00000007984	Tarbp1	100	63.671	Dipodomys_ordii
ENSPVAG00000014798	TARBP1	99	70.970	ENSEASG00005000252	TARBP1	99	70.270	Equus_asinus_asinus
ENSPVAG00000014798	TARBP1	99	71.067	ENSECAG00000023673	TARBP1	98	74.138	Equus_caballus
ENSPVAG00000014798	TARBP1	95	57.338	ENSELUG00000012193	si:dkey-85a20.4	81	59.410	Esox_lucius
ENSPVAG00000014798	TARBP1	99	67.096	ENSFCAG00000014183	TARBP1	99	67.096	Felis_catus
ENSPVAG00000014798	TARBP1	81	55.726	ENSFALG00000013565	TARBP1	99	55.335	Ficedula_albicollis
ENSPVAG00000014798	TARBP1	80	63.825	ENSFDAG00000001308	TARBP1	99	64.055	Fukomys_damarensis
ENSPVAG00000014798	TARBP1	94	51.438	ENSFHEG00000007565	si:dkey-85a20.4	82	53.287	Fundulus_heteroclitus
ENSPVAG00000014798	TARBP1	80	60.339	ENSGMOG00000004549	si:dkey-85a20.4	93	60.274	Gadus_morhua
ENSPVAG00000014798	TARBP1	99	50.961	ENSGALG00000011000	TARBP1	99	50.310	Gallus_gallus
ENSPVAG00000014798	TARBP1	86	39.118	ENSGAFG00000007387	si:dkey-85a20.4	85	39.118	Gambusia_affinis
ENSPVAG00000014798	TARBP1	85	39.498	ENSGACG00000005865	si:dkey-85a20.4	99	39.353	Gasterosteus_aculeatus
ENSPVAG00000014798	TARBP1	99	54.540	ENSGAGG00000012102	TARBP1	97	56.942	Gopherus_agassizii
ENSPVAG00000014798	TARBP1	85	64.621	ENSGGOG00000022879	TARBP1	99	65.192	Gorilla_gorilla
ENSPVAG00000014798	TARBP1	87	40.056	ENSHBUG00000008877	si:dkey-85a20.4	81	60.351	Haplochromis_burtoni
ENSPVAG00000014798	TARBP1	99	65.586	ENSHGLG00000011592	TARBP1	99	65.274	Heterocephalus_glaber_female
ENSPVAG00000014798	TARBP1	92	65.741	ENSHGLG00100015169	TARBP1	99	65.741	Heterocephalus_glaber_male
ENSPVAG00000014798	TARBP1	96	58.333	ENSIPUG00000005249	si:dkey-85a20.4	80	60.150	Ictalurus_punctatus
ENSPVAG00000014798	TARBP1	87	71.429	ENSSTOG00000032291	TARBP1	99	71.429	Ictidomys_tridecemlineatus
ENSPVAG00000014798	TARBP1	89	63.933	ENSJJAG00000017840	Tarbp1	95	72.770	Jaculus_jaculus
ENSPVAG00000014798	TARBP1	80	43.709	ENSKMAG00000017546	si:dkey-85a20.4	71	43.484	Kryptolebias_marmoratus
ENSPVAG00000014798	TARBP1	63	55.272	ENSLBEG00000012132	si:dkey-85a20.4	69	57.785	Labrus_bergylta
ENSPVAG00000014798	TARBP1	99	44.888	ENSLACG00000004337	TARBP1	99	43.874	Latimeria_chalumnae
ENSPVAG00000014798	TARBP1	97	60.131	ENSLOCG00000016214	si:dkey-85a20.4	81	62.857	Lepisosteus_oculatus
ENSPVAG00000014798	TARBP1	96	64.524	ENSLAFG00000011394	TARBP1	99	65.469	Loxodonta_africana
ENSPVAG00000014798	TARBP1	97	68.610	ENSMFAG00000041068	TARBP1	98	68.610	Macaca_fascicularis
ENSPVAG00000014798	TARBP1	97	68.610	ENSMMUG00000021703	TARBP1	98	68.610	Macaca_mulatta
ENSPVAG00000014798	TARBP1	99	68.015	ENSMNEG00000045002	TARBP1	99	67.525	Macaca_nemestrina
ENSPVAG00000014798	TARBP1	84	67.621	ENSMLEG00000044182	TARBP1	99	67.621	Mandrillus_leucophaeus
ENSPVAG00000014798	TARBP1	91	38.467	ENSMAMG00000021760	si:dkey-85a20.4	82	59.441	Mastacembelus_armatus
ENSPVAG00000014798	TARBP1	87	40.014	ENSMZEG00005005751	si:dkey-85a20.4	81	60.000	Maylandia_zebra
ENSPVAG00000014798	TARBP1	99	61.994	ENSMAUG00000020968	Tarbp1	99	61.121	Mesocricetus_auratus
ENSPVAG00000014798	TARBP1	94	68.258	ENSMICG00000015280	TARBP1	87	77.073	Microcebus_murinus
ENSPVAG00000014798	TARBP1	99	61.620	ENSMOCG00000004128	Tarbp1	99	60.810	Microtus_ochrogaster
ENSPVAG00000014798	TARBP1	99	36.353	ENSMMOG00000007795	si:dkey-85a20.4	85	38.017	Mola_mola
ENSPVAG00000014798	TARBP1	99	59.041	ENSMODG00000008504	TARBP1	99	59.041	Monodelphis_domestica
ENSPVAG00000014798	TARBP1	85	38.977	ENSMALG00000002916	si:dkey-85a20.4	85	39.009	Monopterus_albus
ENSPVAG00000014798	TARBP1	99	61.596	MGP_CAROLIEiJ_G0031729	Tarbp1	99	60.910	Mus_caroli
ENSPVAG00000014798	TARBP1	99	61.284	ENSMUSG00000090290	Tarbp1	99	60.661	Mus_musculus
ENSPVAG00000014798	TARBP1	99	61.582	MGP_PahariEiJ_G0023326	Tarbp1	99	60.897	Mus_pahari
ENSPVAG00000014798	TARBP1	99	61.534	MGP_SPRETEiJ_G0032846	Tarbp1	99	60.910	Mus_spretus
ENSPVAG00000014798	TARBP1	78	68.896	ENSMPUG00000002802	TARBP1	99	68.896	Mustela_putorius_furo
ENSPVAG00000014798	TARBP1	85	66.013	ENSMLUG00000002414	TARBP1	99	66.158	Myotis_lucifugus
ENSPVAG00000014798	TARBP1	99	67.726	ENSNLEG00000002518	TARBP1	99	67.730	Nomascus_leucogenys
ENSPVAG00000014798	TARBP1	62	81.176	ENSMEUG00000011370	-	62	81.176	Notamacropus_eugenii
ENSPVAG00000014798	TARBP1	72	72.924	ENSOPRG00000013822	TARBP1	72	72.425	Ochotona_princeps
ENSPVAG00000014798	TARBP1	99	62.251	ENSODEG00000005238	TARBP1	99	62.065	Octodon_degus
ENSPVAG00000014798	TARBP1	85	40.157	ENSONIG00000009789	si:dkey-85a20.4	94	61.053	Oreochromis_niloticus
ENSPVAG00000014798	TARBP1	99	68.658	ENSOCUG00000017418	TARBP1	99	68.165	Oryctolagus_cuniculus
ENSPVAG00000014798	TARBP1	99	37.105	ENSORLG00000010529	si:dkey-85a20.4	80	61.404	Oryzias_latipes
ENSPVAG00000014798	TARBP1	99	37.204	ENSORLG00020019264	si:dkey-85a20.4	80	61.404	Oryzias_latipes_hni
ENSPVAG00000014798	TARBP1	99	36.661	ENSORLG00015003276	si:dkey-85a20.4	80	61.053	Oryzias_latipes_hsok
ENSPVAG00000014798	TARBP1	99	66.400	ENSOGAG00000002379	TARBP1	99	65.848	Otolemur_garnettii
ENSPVAG00000014798	TARBP1	91	78.261	ENSOARG00000003434	TARBP1	99	67.414	Ovis_aries
ENSPVAG00000014798	TARBP1	85	67.298	ENSPPAG00000028097	TARBP1	99	67.886	Pan_paniscus
ENSPVAG00000014798	TARBP1	79	72.374	ENSPPRG00000013561	TARBP1	88	72.374	Panthera_pardus
ENSPVAG00000014798	TARBP1	84	69.099	ENSPTIG00000009281	TARBP1	99	69.099	Panthera_tigris_altaica
ENSPVAG00000014798	TARBP1	99	67.766	ENSPTRG00000002124	TARBP1	99	67.708	Pan_troglodytes
ENSPVAG00000014798	TARBP1	99	68.260	ENSPANG00000021933	TARBP1	99	67.831	Papio_anubis
ENSPVAG00000014798	TARBP1	96	58.863	ENSPKIG00000016716	si:dkey-85a20.4	80	59.375	Paramormyrops_kingsleyae
ENSPVAG00000014798	TARBP1	80	56.942	ENSPSIG00000010699	TARBP1	99	56.942	Pelodiscus_sinensis
ENSPVAG00000014798	TARBP1	97	63.380	ENSPEMG00000006888	Tarbp1	99	63.225	Peromyscus_maniculatus_bairdii
ENSPVAG00000014798	TARBP1	90	71.859	ENSPCIG00000029710	TARBP1	98	71.859	Phascolarctos_cinereus
ENSPVAG00000014798	TARBP1	86	39.604	ENSPFOG00000013020	si:dkey-85a20.4	99	39.546	Poecilia_formosa
ENSPVAG00000014798	TARBP1	94	38.111	ENSPLAG00000006044	si:dkey-85a20.4	81	60.563	Poecilia_latipinna
ENSPVAG00000014798	TARBP1	94	38.061	ENSPMEG00000017857	si:dkey-85a20.4	81	60.563	Poecilia_mexicana
ENSPVAG00000014798	TARBP1	85	39.957	ENSPREG00000022753	si:dkey-85a20.4	79	60.563	Poecilia_reticulata
ENSPVAG00000014798	TARBP1	91	68.733	ENSPPYG00000000102	TARBP1	99	68.913	Pongo_abelii
ENSPVAG00000014798	TARBP1	85	85.714	ENSPCAG00000004808	TARBP1	85	85.714	Procavia_capensis
ENSPVAG00000014798	TARBP1	99	66.667	ENSPCOG00000005666	TARBP1	99	66.111	Propithecus_coquereli
ENSPVAG00000014798	TARBP1	80	43.298	ENSPNYG00000019135	si:dkey-85a20.4	76	59.649	Pundamilia_nyererei
ENSPVAG00000014798	TARBP1	99	57.980	ENSRNOG00000053574	Tarbp1	99	57.170	Rattus_norvegicus
ENSPVAG00000014798	TARBP1	94	68.284	ENSRBIG00000043362	TARBP1	97	68.284	Rhinopithecus_bieti
ENSPVAG00000014798	TARBP1	99	64.496	ENSRROG00000029527	TARBP1	99	64.742	Rhinopithecus_roxellana
ENSPVAG00000014798	TARBP1	87	72.414	ENSSBOG00000034503	TARBP1	99	72.414	Saimiri_boliviensis_boliviensis
ENSPVAG00000014798	TARBP1	84	59.941	ENSSHAG00000000013	TARBP1	99	59.941	Sarcophilus_harrisii
ENSPVAG00000014798	TARBP1	85	39.337	ENSSFOG00015002660	si:dkey-85a20.4	91	60.279	Scleropages_formosus
ENSPVAG00000014798	TARBP1	91	38.962	ENSSMAG00000007081	si:dkey-85a20.4	78	59.091	Scophthalmus_maximus
ENSPVAG00000014798	TARBP1	96	57.929	ENSSDUG00000023566	si:dkey-85a20.4	82	60.702	Seriola_dumerili
ENSPVAG00000014798	TARBP1	85	39.813	ENSSLDG00000020200	si:dkey-85a20.4	84	39.813	Seriola_lalandi_dorsalis
ENSPVAG00000014798	TARBP1	85	85.075	ENSSARG00000012207	TARBP1	84	85.075	Sorex_araneus
ENSPVAG00000014798	TARBP1	97	59.567	ENSSPUG00000015364	TARBP1	97	59.567	Sphenodon_punctatus
ENSPVAG00000014798	TARBP1	92	38.537	ENSSPAG00000007213	si:dkey-85a20.4	85	39.749	Stegastes_partitus
ENSPVAG00000014798	TARBP1	95	75.115	ENSSSCG00000010160	TARBP1	99	73.502	Sus_scrofa
ENSPVAG00000014798	TARBP1	81	55.183	ENSTGUG00000010214	TARBP1	99	55.183	Taeniopygia_guttata
ENSPVAG00000014798	TARBP1	91	55.556	ENSTNIG00000016586	si:dkey-85a20.4	95	58.131	Tetraodon_nigroviridis
ENSPVAG00000014798	TARBP1	92	78.947	ENSTTRG00000008707	TARBP1	96	79.167	Tursiops_truncatus
ENSPVAG00000014798	TARBP1	81	69.588	ENSUMAG00000006730	TARBP1	98	69.588	Ursus_maritimus
ENSPVAG00000014798	TARBP1	69	83.505	ENSVPAG00000007665	TARBP1	78	83.505	Vicugna_pacos
ENSPVAG00000014798	TARBP1	85	68.913	ENSVVUG00000007460	TARBP1	97	68.913	Vulpes_vulpes
ENSPVAG00000014798	TARBP1	84	45.806	ENSXETG00000016224	tarbp1	99	45.806	Xenopus_tropicalis
ENSPVAG00000014798	TARBP1	78	42.409	ENSXCOG00000011779	si:dkey-85a20.4	86	58.545	Xiphophorus_couchianus
ENSPVAG00000014798	TARBP1	65	38.626	ENSXMAG00000009600	si:dkey-85a20.4	94	54.622	Xiphophorus_maculatus