EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000015076 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 7086 bases
Position: chrGeneScaffold_3312:115370-122455
Accession: 105307181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000014210	zf-CCCH	PF00642.24	1.1e-05	1	1
ENSPVAP00000014210	TRM	PF02005.16	2.6e-150	1	1
ENSPVAP00000014210	Met_10	PF02475.16	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000015076	TRMT1-201	1977	XM_011382549	ENSPVAP00000014210	658 (aa)	XP_011380851	UPI00018B3FBD

Gene Model

Click here to download ENSPVAG00000015076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000015076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000015076	TRMT1	98	88.941	ENSG00000104907	TRMT1	100	95.288	Homo_sapiens
ENSPVAG00000015076	TRMT1	99	88.991	ENSAMEG00000012598	TRMT1	97	88.991	Ailuropoda_melanoleuca
ENSPVAG00000015076	TRMT1	87	58.844	ENSACIG00000018680	trmt1	88	58.844	Amphilophus_citrinellus
ENSPVAG00000015076	TRMT1	91	63.861	ENSAOCG00000006781	trmt1	89	63.861	Amphiprion_ocellaris
ENSPVAG00000015076	TRMT1	91	63.921	ENSAPEG00000007712	trmt1	89	63.921	Amphiprion_percula
ENSPVAG00000015076	TRMT1	88	67.354	ENSATEG00000001872	trmt1	86	67.354	Anabas_testudineus
ENSPVAG00000015076	TRMT1	88	67.642	ENSACAG00000003825	TRMT1	93	67.642	Anolis_carolinensis
ENSPVAG00000015076	TRMT1	98	83.975	ENSANAG00000023016	TRMT1	99	86.224	Aotus_nancymaae
ENSPVAG00000015076	TRMT1	87	64.098	ENSACLG00000010073	trmt1	92	64.098	Astatotilapia_calliptera
ENSPVAG00000015076	TRMT1	89	66.273	ENSAMXG00000012026	trmt1	88	66.273	Astyanax_mexicanus
ENSPVAG00000015076	TRMT1	99	88.092	ENSBTAG00000019325	TRMT1	93	88.092	Bos_taurus
ENSPVAG00000015076	TRMT1	78	41.300	WBGene00006613	trm-1	93	41.300	Caenorhabditis_elegans
ENSPVAG00000015076	TRMT1	98	83.538	ENSCJAG00000004566	TRMT1	99	83.538	Callithrix_jacchus
ENSPVAG00000015076	TRMT1	99	91.131	ENSCAFG00000017070	TRMT1	100	91.366	Canis_familiaris
ENSPVAG00000015076	TRMT1	98	89.783	ENSCAFG00020005397	TRMT1	99	87.156	Canis_lupus_dingo
ENSPVAG00000015076	TRMT1	99	87.805	ENSCHIG00000013569	TRMT1	99	87.805	Capra_hircus
ENSPVAG00000015076	TRMT1	98	82.919	ENSTSYG00000003207	TRMT1	99	82.801	Carlito_syrichta
ENSPVAG00000015076	TRMT1	86	80.177	ENSCAPG00000003355	TRMT1	99	80.177	Cavia_aperea
ENSPVAG00000015076	TRMT1	99	82.308	ENSCPOG00000011754	TRMT1	98	82.308	Cavia_porcellus
ENSPVAG00000015076	TRMT1	99	82.209	ENSCCAG00000022263	TRMT1	99	85.552	Cebus_capucinus
ENSPVAG00000015076	TRMT1	84	74.207	ENSCATG00000038220	-	98	74.207	Cercocebus_atys
ENSPVAG00000015076	TRMT1	99	88.550	ENSCATG00000039850	TRMT1	99	88.550	Cercocebus_atys
ENSPVAG00000015076	TRMT1	98	86.293	ENSCLAG00000015295	TRMT1	95	86.293	Chinchilla_lanigera
ENSPVAG00000015076	TRMT1	79	90.631	ENSCSAG00000006500	TRMT1	99	90.631	Chlorocebus_sabaeus
ENSPVAG00000015076	TRMT1	93	67.647	ENSCPBG00000023866	TRMT1	89	68.464	Chrysemys_picta_bellii
ENSPVAG00000015076	TRMT1	83	45.374	ENSCING00000002884	-	97	45.374	Ciona_intestinalis
ENSPVAG00000015076	TRMT1	83	45.848	ENSCSAVG00000010927	-	100	46.097	Ciona_savignyi
ENSPVAG00000015076	TRMT1	100	71.818	ENSCANG00000040631	TRMT1	100	71.818	Colobus_angolensis_palliatus
ENSPVAG00000015076	TRMT1	92	69.536	ENSCANG00000031650	-	96	69.243	Colobus_angolensis_palliatus
ENSPVAG00000015076	TRMT1	99	81.639	ENSCGRG00001022594	Trmt1	99	81.639	Cricetulus_griseus_chok1gshd
ENSPVAG00000015076	TRMT1	99	81.639	ENSCGRG00000017732	Trmt1	99	81.639	Cricetulus_griseus_crigri
ENSPVAG00000015076	TRMT1	93	63.577	ENSCSEG00000001643	trmt1	88	66.239	Cynoglossus_semilaevis
ENSPVAG00000015076	TRMT1	87	67.250	ENSCVAG00000011886	trmt1	85	67.250	Cyprinodon_variegatus
ENSPVAG00000015076	TRMT1	87	65.749	ENSDARG00000010978	trmt1	85	65.749	Danio_rerio
ENSPVAG00000015076	TRMT1	84	63.214	ENSDNOG00000048240	-	95	63.214	Dasypus_novemcinctus
ENSPVAG00000015076	TRMT1	99	82.012	ENSDORG00000014298	Trmt1	99	82.012	Dipodomys_ordii
ENSPVAG00000015076	TRMT1	78	49.035	FBgn0032430	CG6388	87	49.035	Drosophila_melanogaster
ENSPVAG00000015076	TRMT1	55	83.217	ENSETEG00000015483	-	54	83.217	Echinops_telfairi
ENSPVAG00000015076	TRMT1	78	53.216	ENSEBUG00000003449	trmt1	88	48.922	Eptatretus_burgeri
ENSPVAG00000015076	TRMT1	95	88.782	ENSEASG00005004050	TRMT1	100	88.697	Equus_asinus_asinus
ENSPVAG00000015076	TRMT1	95	88.782	ENSECAG00000016149	TRMT1	100	88.697	Equus_caballus
ENSPVAG00000015076	TRMT1	60	71.537	ENSEEUG00000014102	-	100	71.537	Erinaceus_europaeus
ENSPVAG00000015076	TRMT1	93	62.075	ENSELUG00000021659	trmt1	91	62.075	Esox_lucius
ENSPVAG00000015076	TRMT1	99	88.584	ENSFCAG00000000483	TRMT1	99	88.584	Felis_catus
ENSPVAG00000015076	TRMT1	99	83.817	ENSFDAG00000007386	TRMT1	99	83.817	Fukomys_damarensis
ENSPVAG00000015076	TRMT1	89	64.527	ENSFHEG00000012865	trmt1	90	67.831	Fundulus_heteroclitus
ENSPVAG00000015076	TRMT1	87	60.627	ENSGMOG00000006564	trmt1	98	61.150	Gadus_morhua
ENSPVAG00000015076	TRMT1	89	67.009	ENSGAFG00000011862	trmt1	90	67.295	Gambusia_affinis
ENSPVAG00000015076	TRMT1	89	63.265	ENSGACG00000000227	trmt1	94	63.265	Gasterosteus_aculeatus
ENSPVAG00000015076	TRMT1	92	68.249	ENSGAGG00000016432	TRMT1	89	68.249	Gopherus_agassizii
ENSPVAG00000015076	TRMT1	98	89.097	ENSGGOG00000014007	TRMT1	99	88.855	Gorilla_gorilla
ENSPVAG00000015076	TRMT1	89	56.684	ENSHBUG00000008821	trmt1	97	56.684	Haplochromis_burtoni
ENSPVAG00000015076	TRMT1	99	84.332	ENSHGLG00000015972	TRMT1	99	84.332	Heterocephalus_glaber_female
ENSPVAG00000015076	TRMT1	99	78.528	ENSHGLG00100018112	TRMT1	99	78.528	Heterocephalus_glaber_male
ENSPVAG00000015076	TRMT1	87	63.700	ENSHCOG00000009447	trmt1	88	63.700	Hippocampus_comes
ENSPVAG00000015076	TRMT1	89	65.109	ENSIPUG00000002899	trmt1	87	65.109	Ictalurus_punctatus
ENSPVAG00000015076	TRMT1	99	86.738	ENSSTOG00000012531	TRMT1	99	86.738	Ictidomys_tridecemlineatus
ENSPVAG00000015076	TRMT1	94	82.553	ENSJJAG00000017154	Trmt1	99	80.611	Jaculus_jaculus
ENSPVAG00000015076	TRMT1	87	67.776	ENSKMAG00000011809	trmt1	98	64.214	Kryptolebias_marmoratus
ENSPVAG00000015076	TRMT1	90	65.488	ENSLBEG00000012703	trmt1	87	65.488	Labrus_bergylta
ENSPVAG00000015076	TRMT1	88	57.290	ENSLACG00000014585	TRMT1	96	56.807	Latimeria_chalumnae
ENSPVAG00000015076	TRMT1	87	62.586	ENSLOCG00000006479	trmt1	97	63.103	Lepisosteus_oculatus
ENSPVAG00000015076	TRMT1	95	90.209	ENSLAFG00000014072	TRMT1	96	90.209	Loxodonta_africana
ENSPVAG00000015076	TRMT1	99	88.702	ENSMFAG00000033143	TRMT1	99	88.702	Macaca_fascicularis
ENSPVAG00000015076	TRMT1	99	81.887	ENSMMUG00000001167	TRMT1	100	81.887	Macaca_mulatta
ENSPVAG00000015076	TRMT1	99	88.550	ENSMNEG00000037867	TRMT1	99	88.550	Macaca_nemestrina
ENSPVAG00000015076	TRMT1	100	87.860	ENSMLEG00000016142	TRMT1	100	87.860	Mandrillus_leucophaeus
ENSPVAG00000015076	TRMT1	90	65.657	ENSMAMG00000004357	trmt1	88	65.657	Mastacembelus_armatus
ENSPVAG00000015076	TRMT1	87	64.623	ENSMZEG00005014510	trmt1	85	64.623	Maylandia_zebra
ENSPVAG00000015076	TRMT1	98	81.649	ENSMAUG00000011134	Trmt1	99	81.032	Mesocricetus_auratus
ENSPVAG00000015076	TRMT1	99	88.991	ENSMICG00000000793	TRMT1	99	88.991	Microcebus_murinus
ENSPVAG00000015076	TRMT1	97	82.683	ENSMOCG00000015895	Trmt1	99	81.942	Microtus_ochrogaster
ENSPVAG00000015076	TRMT1	87	66.550	ENSMMOG00000011097	trmt1	92	66.550	Mola_mola
ENSPVAG00000015076	TRMT1	92	77.723	ENSMODG00000011619	TRMT1	97	77.723	Monodelphis_domestica
ENSPVAG00000015076	TRMT1	99	82.398	MGP_CAROLIEiJ_G0031304	Trmt1	99	82.398	Mus_caroli
ENSPVAG00000015076	TRMT1	99	81.791	ENSMUSG00000001909	Trmt1	99	81.791	Mus_musculus
ENSPVAG00000015076	TRMT1	99	81.639	MGP_SPRETEiJ_G0032422	Trmt1	99	81.639	Mus_spretus
ENSPVAG00000015076	TRMT1	99	89.313	ENSMPUG00000004210	TRMT1	94	89.313	Mustela_putorius_furo
ENSPVAG00000015076	TRMT1	99	91.145	ENSMLUG00000012809	TRMT1	98	91.145	Myotis_lucifugus
ENSPVAG00000015076	TRMT1	98	82.791	ENSNGAG00000022486	Trmt1	97	82.791	Nannospalax_galili
ENSPVAG00000015076	TRMT1	75	68.657	ENSNBRG00000024376	trmt1	85	68.657	Neolamprologus_brichardi
ENSPVAG00000015076	TRMT1	79	87.761	ENSNLEG00000013019	-	99	87.021	Nomascus_leucogenys
ENSPVAG00000015076	TRMT1	90	77.234	ENSMEUG00000013756	TRMT1	99	77.234	Notamacropus_eugenii
ENSPVAG00000015076	TRMT1	79	90.071	ENSOPRG00000009471	-	79	90.071	Ochotona_princeps
ENSPVAG00000015076	TRMT1	98	84.031	ENSODEG00000010323	TRMT1	98	84.031	Octodon_degus
ENSPVAG00000015076	TRMT1	94	63.738	ENSONIG00000000400	trmt1	99	63.738	Oreochromis_niloticus
ENSPVAG00000015076	TRMT1	79	88.719	ENSOCUG00000021934	TRMT1	99	88.719	Oryctolagus_cuniculus
ENSPVAG00000015076	TRMT1	87	61.684	ENSORLG00000020074	trmt1	91	61.684	Oryzias_latipes
ENSPVAG00000015076	TRMT1	87	64.799	ENSORLG00020007561	trmt1	89	64.623	Oryzias_latipes_hni
ENSPVAG00000015076	TRMT1	87	65.149	ENSORLG00015006547	trmt1	86	65.149	Oryzias_latipes_hsok
ENSPVAG00000015076	TRMT1	89	65.180	ENSOMEG00000019343	trmt1	88	65.180	Oryzias_melastigma
ENSPVAG00000015076	TRMT1	96	84.019	ENSOGAG00000025576	TRMT1	99	84.019	Otolemur_garnettii
ENSPVAG00000015076	TRMT1	99	71.775	ENSOARG00000009397	TRMT1	93	72.231	Ovis_aries
ENSPVAG00000015076	TRMT1	99	80.462	ENSPPRG00000012117	TRMT1	100	80.462	Panthera_pardus
ENSPVAG00000015076	TRMT1	77	90.274	ENSPTIG00000008833	TRMT1	97	90.274	Panthera_tigris_altaica
ENSPVAG00000015076	TRMT1	98	88.941	ENSPTRG00000010557	TRMT1	99	88.702	Pan_troglodytes
ENSPVAG00000015076	TRMT1	95	68.312	ENSPTRG00000050421	-	96	68.312	Pan_troglodytes
ENSPVAG00000015076	TRMT1	99	88.702	ENSPANG00000009247	TRMT1	99	88.702	Papio_anubis
ENSPVAG00000015076	TRMT1	86	72.951	ENSPANG00000034058	-	98	72.951	Papio_anubis
ENSPVAG00000015076	TRMT1	88	67.637	ENSPKIG00000005309	trmt1	85	67.637	Paramormyrops_kingsleyae
ENSPVAG00000015076	TRMT1	86	59.752	ENSPSIG00000008762	TRMT1	80	59.752	Pelodiscus_sinensis
ENSPVAG00000015076	TRMT1	87	65.157	ENSPMGG00000019764	trmt1	90	65.157	Periophthalmus_magnuspinnatus
ENSPVAG00000015076	TRMT1	97	84.483	ENSPEMG00000016247	Trmt1	99	83.308	Peromyscus_maniculatus_bairdii
ENSPVAG00000015076	TRMT1	94	56.522	ENSPMAG00000004329	trmt1	96	56.522	Petromyzon_marinus
ENSPVAG00000015076	TRMT1	96	74.531	ENSPCIG00000019273	TRMT1	99	74.531	Phascolarctos_cinereus
ENSPVAG00000015076	TRMT1	87	69.634	ENSPFOG00000008527	trmt1	88	69.634	Poecilia_formosa
ENSPVAG00000015076	TRMT1	87	69.459	ENSPLAG00000018788	trmt1	87	72.340	Poecilia_latipinna
ENSPVAG00000015076	TRMT1	87	69.459	ENSPMEG00000013120	trmt1	88	69.459	Poecilia_mexicana
ENSPVAG00000015076	TRMT1	87	68.293	ENSPREG00000000211	trmt1	85	68.586	Poecilia_reticulata
ENSPVAG00000015076	TRMT1	98	89.252	ENSPPYG00000009622	TRMT1	99	89.008	Pongo_abelii
ENSPVAG00000015076	TRMT1	98	79.598	ENSPCAG00000003698	TRMT1	99	79.598	Procavia_capensis
ENSPVAG00000015076	TRMT1	99	88.532	ENSPCOG00000008653	TRMT1	99	88.532	Propithecus_coquereli
ENSPVAG00000015076	TRMT1	87	63.222	ENSPNYG00000013960	trmt1	92	63.222	Pundamilia_nyererei
ENSPVAG00000015076	TRMT1	85	68.815	ENSPNAG00000024859	trmt1	90	68.815	Pygocentrus_nattereri
ENSPVAG00000015076	TRMT1	96	82.862	ENSRNOG00000002914	Trmt1	99	82.862	Rattus_norvegicus
ENSPVAG00000015076	TRMT1	99	88.244	ENSRBIG00000038324	TRMT1	99	88.244	Rhinopithecus_bieti
ENSPVAG00000015076	TRMT1	92	70.248	ENSRBIG00000037505	-	97	69.936	Rhinopithecus_bieti
ENSPVAG00000015076	TRMT1	92	69.256	ENSRROG00000031847	-	96	68.971	Rhinopithecus_roxellana
ENSPVAG00000015076	TRMT1	99	88.092	ENSRROG00000028599	TRMT1	99	88.092	Rhinopithecus_roxellana
ENSPVAG00000015076	TRMT1	77	37.687	YDR120C	-	92	37.757	Saccharomyces_cerevisiae
ENSPVAG00000015076	TRMT1	99	82.822	ENSSBOG00000028861	TRMT1	99	85.390	Saimiri_boliviensis_boliviensis
ENSPVAG00000015076	TRMT1	89	78.535	ENSSHAG00000014381	TRMT1	98	77.100	Sarcophilus_harrisii
ENSPVAG00000015076	TRMT1	88	67.241	ENSSFOG00015004139	trmt1	88	65.781	Scleropages_formosus
ENSPVAG00000015076	TRMT1	87	67.247	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSPVAG00000015076	TRMT1	87	67.308	ENSSDUG00000012740	trmt1	84	67.308	Seriola_dumerili
ENSPVAG00000015076	TRMT1	87	66.958	ENSSLDG00000005971	trmt1	84	66.958	Seriola_lalandi_dorsalis
ENSPVAG00000015076	TRMT1	85	84.574	ENSSARG00000005138	TRMT1	99	84.574	Sorex_araneus
ENSPVAG00000015076	TRMT1	79	58.935	ENSSPUG00000001084	TRMT1	89	59.316	Sphenodon_punctatus
ENSPVAG00000015076	TRMT1	91	63.411	ENSSPAG00000007153	trmt1	99	63.054	Stegastes_partitus
ENSPVAG00000015076	TRMT1	97	90.439	ENSSSCG00000013744	TRMT1	100	90.439	Sus_scrofa
ENSPVAG00000015076	TRMT1	85	63.093	ENSTRUG00000010700	trmt1	85	63.573	Takifugu_rubripes
ENSPVAG00000015076	TRMT1	87	65.909	ENSTNIG00000018808	trmt1	97	65.909	Tetraodon_nigroviridis
ENSPVAG00000015076	TRMT1	98	86.801	ENSTTRG00000006379	TRMT1	99	86.260	Tursiops_truncatus
ENSPVAG00000015076	TRMT1	99	89.555	ENSUAMG00000022911	TRMT1	99	89.555	Ursus_americanus
ENSPVAG00000015076	TRMT1	97	90.110	ENSUMAG00000006027	TRMT1	100	90.110	Ursus_maritimus
ENSPVAG00000015076	TRMT1	99	90.979	ENSVVUG00000024177	TRMT1	99	90.979	Vulpes_vulpes
ENSPVAG00000015076	TRMT1	70	71.367	ENSXETG00000033863	TRMT1	92	71.367	Xenopus_tropicalis
ENSPVAG00000015076	TRMT1	87	68.293	ENSXCOG00000015733	trmt1	88	68.586	Xiphophorus_couchianus
ENSPVAG00000015076	TRMT1	88	67.764	ENSXMAG00000013823	trmt1	98	67.938	Xiphophorus_maculatus