EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000015243 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 23465 bases
Position: chrGeneScaffold_3146:36072-59536
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000014368	Fox-1_C	PF12414.8	6.1e-42	1	1
ENSPVAP00000014368	RRM_1	PF00076.22	6.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000015243	RBFOX3-201	1080	-	ENSPVAP00000014368	359 (aa)	-	UPI00018B175F

Gene Model

Click here to download ENSPVAG00000015243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000015243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000015243	RBFOX3	67	46.290	ENSPVAG00000015844	RBFOX2	63	44.876
ENSPVAG00000015243	RBFOX3	100	50.515	ENSPVAG00000013467	RBFOX1	78	48.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000015243	RBFOX3	96	86.957	ENSG00000167281	RBFOX3	100	85.127	Homo_sapiens
ENSPVAG00000015243	RBFOX3	100	63.812	ENSAPOG00000021630	rbfox3b	81	59.366	Acanthochromis_polyacanthus
ENSPVAG00000015243	RBFOX3	81	83.673	ENSAPOG00000015658	-	80	86.207	Acanthochromis_polyacanthus
ENSPVAG00000015243	RBFOX3	96	70.799	ENSAMEG00000014170	RBFOX3	80	68.320	Ailuropoda_melanoleuca
ENSPVAG00000015243	RBFOX3	83	77.551	ENSACIG00000010817	rbfox3b	85	86.207	Amphilophus_citrinellus
ENSPVAG00000015243	RBFOX3	72	64.130	ENSACIG00000003768	-	72	63.602	Amphilophus_citrinellus
ENSPVAG00000015243	RBFOX3	100	63.812	ENSAOCG00000012358	rbfox3b	81	59.366	Amphiprion_ocellaris
ENSPVAG00000015243	RBFOX3	79	83.673	ENSAOCG00000010786	-	71	86.207	Amphiprion_ocellaris
ENSPVAG00000015243	RBFOX3	80	72.093	ENSAPEG00000019081	rbfox3b	73	86.207	Amphiprion_percula
ENSPVAG00000015243	RBFOX3	79	83.673	ENSAPEG00000015891	-	71	86.207	Amphiprion_percula
ENSPVAG00000015243	RBFOX3	100	64.738	ENSATEG00000019945	rbfox3b	95	62.069	Anabas_testudineus
ENSPVAG00000015243	RBFOX3	96	60.920	ENSATEG00000023101	-	92	57.759	Anabas_testudineus
ENSPVAG00000015243	RBFOX3	100	69.890	ENSACAG00000016093	RBFOX3	83	68.300	Anolis_carolinensis
ENSPVAG00000015243	RBFOX3	100	79.224	ENSANAG00000023457	RBFOX3	91	79.224	Aotus_nancymaae
ENSPVAG00000015243	RBFOX3	100	63.361	ENSACLG00000025552	-	81	59.195	Astatotilapia_calliptera
ENSPVAG00000015243	RBFOX3	100	63.231	ENSACLG00000020011	rbfox3b	95	59.078	Astatotilapia_calliptera
ENSPVAG00000015243	RBFOX3	96	62.571	ENSAMXG00000037246	rbfox3a	90	60.286	Astyanax_mexicanus
ENSPVAG00000015243	RBFOX3	100	62.088	ENSAMXG00000042841	rbfox3b	85	57.880	Astyanax_mexicanus
ENSPVAG00000015243	RBFOX3	100	79.501	ENSBTAG00000006280	RBFOX3	100	79.501	Bos_taurus
ENSPVAG00000015243	RBFOX3	96	86.087	ENSCJAG00000009563	RBFOX3	96	85.217	Callithrix_jacchus
ENSPVAG00000015243	RBFOX3	83	68.896	ENSCAFG00000005547	RBFOX3	85	69.825	Canis_familiaris
ENSPVAG00000015243	RBFOX3	96	87.536	ENSCAFG00020008126	RBFOX3	92	86.416	Canis_lupus_dingo
ENSPVAG00000015243	RBFOX3	96	85.838	ENSCHIG00000009124	RBFOX3	92	84.971	Capra_hircus
ENSPVAG00000015243	RBFOX3	96	88.696	ENSTSYG00000029617	RBFOX3	96	86.667	Carlito_syrichta
ENSPVAG00000015243	RBFOX3	96	87.608	ENSCPOG00000021703	RBFOX3	96	87.320	Cavia_porcellus
ENSPVAG00000015243	RBFOX3	100	79.224	ENSCCAG00000028450	RBFOX3	100	79.224	Cebus_capucinus
ENSPVAG00000015243	RBFOX3	96	82.899	ENSCATG00000018349	RBFOX3	81	93.103	Cercocebus_atys
ENSPVAG00000015243	RBFOX3	96	87.861	ENSCLAG00000006449	RBFOX3	96	85.838	Chinchilla_lanigera
ENSPVAG00000015243	RBFOX3	96	74.493	ENSCSAG00000002355	RBFOX3	95	73.623	Chlorocebus_sabaeus
ENSPVAG00000015243	RBFOX3	96	68.696	ENSCPBG00000010904	RBFOX3	95	68.116	Chrysemys_picta_bellii
ENSPVAG00000015243	RBFOX3	96	86.994	ENSCANG00000043120	RBFOX3	92	86.127	Colobus_angolensis_palliatus
ENSPVAG00000015243	RBFOX3	96	86.994	ENSCGRG00001019476	Rbfox3	96	86.994	Cricetulus_griseus_chok1gshd
ENSPVAG00000015243	RBFOX3	96	86.994	ENSCGRG00000003268	Rbfox3	96	86.994	Cricetulus_griseus_crigri
ENSPVAG00000015243	RBFOX3	100	51.507	ENSCSEG00000020606	RBFOX3	83	50.898	Cynoglossus_semilaevis
ENSPVAG00000015243	RBFOX3	84	83.673	ENSCSEG00000015567	RBFOX3	71	86.207	Cynoglossus_semilaevis
ENSPVAG00000015243	RBFOX3	100	63.812	ENSCVAG00000006882	rbfox3b	81	59.366	Cyprinodon_variegatus
ENSPVAG00000015243	RBFOX3	83	75.510	ENSDARG00000074310	rbfox3b	82	79.310	Danio_rerio
ENSPVAG00000015243	RBFOX3	96	61.714	ENSDARG00000010083	rbfox3a	91	60.000	Danio_rerio
ENSPVAG00000015243	RBFOX3	86	75.649	ENSDNOG00000039391	RBFOX3	81	74.675	Dasypus_novemcinctus
ENSPVAG00000015243	RBFOX3	96	76.232	ENSDORG00000005352	Rbfox3	95	72.384	Dipodomys_ordii
ENSPVAG00000015243	RBFOX3	100	55.467	ENSEBUG00000002129	RBFOX3	88	55.833	Eptatretus_burgeri
ENSPVAG00000015243	RBFOX3	86	46.273	ENSEBUG00000013559	RBFOX3	71	45.875	Eptatretus_burgeri
ENSPVAG00000015243	RBFOX3	96	77.101	ENSEASG00005005059	RBFOX3	95	77.101	Equus_asinus_asinus
ENSPVAG00000015243	RBFOX3	96	76.812	ENSECAG00000023811	RBFOX3	95	76.812	Equus_caballus
ENSPVAG00000015243	RBFOX3	78	92.593	ENSEEUG00000013974	RBFOX3	75	88.506	Erinaceus_europaeus
ENSPVAG00000015243	RBFOX3	100	63.536	ENSELUG00000017963	rbfox3b	95	50.432	Esox_lucius
ENSPVAG00000015243	RBFOX3	96	76.012	ENSFCAG00000002555	RBFOX3	95	75.434	Felis_catus
ENSPVAG00000015243	RBFOX3	96	59.384	ENSFALG00000012288	RBFOX3	60	84.483	Ficedula_albicollis
ENSPVAG00000015243	RBFOX3	96	87.896	ENSFDAG00000007489	RBFOX3	96	87.608	Fukomys_damarensis
ENSPVAG00000015243	RBFOX3	100	54.972	ENSFHEG00000008550	rbfox3b	95	50.720	Fundulus_heteroclitus
ENSPVAG00000015243	RBFOX3	100	56.593	ENSGMOG00000019304	-	86	61.246	Gadus_morhua
ENSPVAG00000015243	RBFOX3	96	70.725	ENSGALG00000032889	RBFOX3	83	69.855	Gallus_gallus
ENSPVAG00000015243	RBFOX3	83	77.551	ENSGAFG00000005025	rbfox3b	74	86.207	Gambusia_affinis
ENSPVAG00000015243	RBFOX3	96	64.205	ENSGACG00000002138	-	92	62.784	Gasterosteus_aculeatus
ENSPVAG00000015243	RBFOX3	96	68.696	ENSGAGG00000020025	RBFOX3	95	68.116	Gopherus_agassizii
ENSPVAG00000015243	RBFOX3	96	86.705	ENSGGOG00000012546	RBFOX3	85	93.103	Gorilla_gorilla
ENSPVAG00000015243	RBFOX3	100	63.231	ENSHBUG00000018099	rbfox3b	81	59.366	Haplochromis_burtoni
ENSPVAG00000015243	RBFOX3	100	63.085	ENSHBUG00000023098	-	86	59.195	Haplochromis_burtoni
ENSPVAG00000015243	RBFOX3	96	86.819	ENSHGLG00000008679	RBFOX3	96	85.673	Heterocephalus_glaber_female
ENSPVAG00000015243	RBFOX3	96	84.814	ENSHGLG00100014739	RBFOX3	92	84.814	Heterocephalus_glaber_male
ENSPVAG00000015243	RBFOX3	79	82.222	ENSHCOG00000001863	RBFOX3	80	82.759	Hippocampus_comes
ENSPVAG00000015243	RBFOX3	96	58.382	ENSHCOG00000007444	RBFOX3	76	56.686	Hippocampus_comes
ENSPVAG00000015243	RBFOX3	96	61.429	ENSIPUG00000012010	rbfox3a	70	80.769	Ictalurus_punctatus
ENSPVAG00000015243	RBFOX3	100	55.989	ENSIPUG00000021966	rbfox3b	94	54.942	Ictalurus_punctatus
ENSPVAG00000015243	RBFOX3	96	70.145	ENSSTOG00000026817	RBFOX3	94	76.692	Ictidomys_tridecemlineatus
ENSPVAG00000015243	RBFOX3	96	86.705	ENSJJAG00000014167	Rbfox3	96	85.838	Jaculus_jaculus
ENSPVAG00000015243	RBFOX3	100	63.812	ENSKMAG00000006726	rbfox3b	71	86.207	Kryptolebias_marmoratus
ENSPVAG00000015243	RBFOX3	100	63.536	ENSLBEG00000004030	rbfox3b	85	86.207	Labrus_bergylta
ENSPVAG00000015243	RBFOX3	96	63.506	ENSLBEG00000022508	-	81	59.483	Labrus_bergylta
ENSPVAG00000015243	RBFOX3	96	59.140	ENSLACG00000018409	-	83	59.140	Latimeria_chalumnae
ENSPVAG00000015243	RBFOX3	96	65.517	ENSLOCG00000012267	rbfox3a	90	63.793	Lepisosteus_oculatus
ENSPVAG00000015243	RBFOX3	96	85.217	ENSLAFG00000016623	RBFOX3	92	84.638	Loxodonta_africana
ENSPVAG00000015243	RBFOX3	96	86.957	ENSMFAG00000002247	RBFOX3	96	86.087	Macaca_fascicularis
ENSPVAG00000015243	RBFOX3	100	80.055	ENSMMUG00000023028	RBFOX3	100	80.055	Macaca_mulatta
ENSPVAG00000015243	RBFOX3	96	82.899	ENSMNEG00000041147	RBFOX3	92	82.370	Macaca_nemestrina
ENSPVAG00000015243	RBFOX3	96	82.899	ENSMLEG00000025686	RBFOX3	95	73.333	Mandrillus_leucophaeus
ENSPVAG00000015243	RBFOX3	83	77.551	ENSMAMG00000019810	rbfox3b	84	86.207	Mastacembelus_armatus
ENSPVAG00000015243	RBFOX3	96	58.790	ENSMAMG00000020600	-	85	55.043	Mastacembelus_armatus
ENSPVAG00000015243	RBFOX3	100	63.231	ENSMZEG00005000781	rbfox3b	81	59.366	Maylandia_zebra
ENSPVAG00000015243	RBFOX3	66	60.448	ENSMZEG00005003055	-	54	72.000	Maylandia_zebra
ENSPVAG00000015243	RBFOX3	96	85.879	ENSMAUG00000013543	Rbfox3	96	83.573	Mesocricetus_auratus
ENSPVAG00000015243	RBFOX3	100	85.319	ENSMICG00000014898	RBFOX3	93	85.549	Microcebus_murinus
ENSPVAG00000015243	RBFOX3	96	84.104	ENSMOCG00000015373	Rbfox3	96	84.104	Microtus_ochrogaster
ENSPVAG00000015243	RBFOX3	100	62.912	ENSMMOG00000020193	rbfox3b	81	59.599	Mola_mola
ENSPVAG00000015243	RBFOX3	96	70.725	ENSMODG00000002089	RBFOX3	83	69.855	Monodelphis_domestica
ENSPVAG00000015243	RBFOX3	84	85.714	ENSMALG00000018270	-	82	89.655	Monopterus_albus
ENSPVAG00000015243	RBFOX3	100	62.983	ENSMALG00000020407	rbfox3b	81	58.501	Monopterus_albus
ENSPVAG00000015243	RBFOX3	96	85.549	MGP_CAROLIEiJ_G0017487	Rbfox3	91	94.156	Mus_caroli
ENSPVAG00000015243	RBFOX3	96	86.705	ENSMUSG00000025576	Rbfox3	91	93.506	Mus_musculus
ENSPVAG00000015243	RBFOX3	96	87.861	MGP_PahariEiJ_G0018614	Rbfox3	91	94.156	Mus_pahari
ENSPVAG00000015243	RBFOX3	96	85.260	MGP_SPRETEiJ_G0018331	Rbfox3	91	94.156	Mus_spretus
ENSPVAG00000015243	RBFOX3	96	65.707	ENSMPUG00000012319	RBFOX3	87	66.754	Mustela_putorius_furo
ENSPVAG00000015243	RBFOX3	96	85.549	ENSNGAG00000018006	Rbfox3	96	85.549	Nannospalax_galili
ENSPVAG00000015243	RBFOX3	100	62.674	ENSNBRG00000010102	rbfox3b	74	85.185	Neolamprologus_brichardi
ENSPVAG00000015243	RBFOX3	78	86.667	ENSNBRG00000022885	-	77	86.207	Neolamprologus_brichardi
ENSPVAG00000015243	RBFOX3	60	92.593	ENSNLEG00000000153	-	75	92.593	Nomascus_leucogenys
ENSPVAG00000015243	RBFOX3	96	60.290	ENSMEUG00000004218	-	96	58.551	Notamacropus_eugenii
ENSPVAG00000015243	RBFOX3	62	90.184	ENSOPRG00000016279	-	63	90.184	Ochotona_princeps
ENSPVAG00000015243	RBFOX3	96	87.861	ENSODEG00000009433	RBFOX3	92	85.838	Octodon_degus
ENSPVAG00000015243	RBFOX3	100	68.493	ENSONIG00000009549	rbfox3b	92	66.286	Oreochromis_niloticus
ENSPVAG00000015243	RBFOX3	100	63.636	ENSONIG00000007282	-	87	59.483	Oreochromis_niloticus
ENSPVAG00000015243	RBFOX3	84	68.182	ENSOCUG00000014217	RBFOX3	84	67.532	Oryctolagus_cuniculus
ENSPVAG00000015243	RBFOX3	100	63.812	ENSORLG00000000905	rbfox3b	64	59.366	Oryzias_latipes
ENSPVAG00000015243	RBFOX3	100	63.812	ENSORLG00020018030	rbfox3b	81	59.366	Oryzias_latipes_hni
ENSPVAG00000015243	RBFOX3	100	63.536	ENSORLG00015009200	rbfox3b	85	86.207	Oryzias_latipes_hsok
ENSPVAG00000015243	RBFOX3	66	65.891	ENSOMEG00000014677	rbfox3b	76	58.025	Oryzias_melastigma
ENSPVAG00000015243	RBFOX3	96	73.623	ENSOGAG00000029595	RBFOX3	80	72.754	Otolemur_garnettii
ENSPVAG00000015243	RBFOX3	63	84.483	ENSOARG00000002908	RBFOX3	61	72.059	Ovis_aries
ENSPVAG00000015243	RBFOX3	83	87.919	ENSPPAG00000025383	RBFOX3	85	87.919	Pan_paniscus
ENSPVAG00000015243	RBFOX3	96	84.928	ENSPPRG00000007819	RBFOX3	96	84.058	Panthera_pardus
ENSPVAG00000015243	RBFOX3	96	86.705	ENSPTRG00000009727	RBFOX3	92	85.838	Pan_troglodytes
ENSPVAG00000015243	RBFOX3	96	82.899	ENSPANG00000019837	RBFOX3	95	73.333	Papio_anubis
ENSPVAG00000015243	RBFOX3	96	66.092	ENSPKIG00000010299	rbfox3a	77	58.213	Paramormyrops_kingsleyae
ENSPVAG00000015243	RBFOX3	100	53.889	ENSPKIG00000022633	-	80	50.435	Paramormyrops_kingsleyae
ENSPVAG00000015243	RBFOX3	86	61.981	ENSPMGG00000008000	rbfox3b	77	58.863	Periophthalmus_magnuspinnatus
ENSPVAG00000015243	RBFOX3	96	84.393	ENSPEMG00000010500	Rbfox3	96	84.393	Peromyscus_maniculatus_bairdii
ENSPVAG00000015243	RBFOX3	62	51.271	ENSPMAG00000008689	rbfox3b	93	52.542	Petromyzon_marinus
ENSPVAG00000015243	RBFOX3	96	83.815	ENSPCIG00000005766	RBFOX3	96	82.081	Phascolarctos_cinereus
ENSPVAG00000015243	RBFOX3	100	63.536	ENSPFOG00000018294	rbfox3b	92	54.261	Poecilia_formosa
ENSPVAG00000015243	RBFOX3	63	77.551	ENSPLAG00000000481	rbfox3b	65	86.207	Poecilia_latipinna
ENSPVAG00000015243	RBFOX3	100	54.972	ENSPMEG00000022997	rbfox3b	95	50.720	Poecilia_mexicana
ENSPVAG00000015243	RBFOX3	100	63.361	ENSPREG00000012886	rbfox3b	86	59.195	Poecilia_reticulata
ENSPVAG00000015243	RBFOX3	83	73.154	ENSPPYG00000008704	RBFOX3	74	73.154	Pongo_abelii
ENSPVAG00000015243	RBFOX3	96	84.012	ENSPCAG00000001401	RBFOX3	96	84.012	Procavia_capensis
ENSPVAG00000015243	RBFOX3	100	86.111	ENSPCOG00000012689	RBFOX3	97	86.087	Propithecus_coquereli
ENSPVAG00000015243	RBFOX3	74	85.185	ENSPNYG00000010414	rbfox3b	74	85.185	Pundamilia_nyererei
ENSPVAG00000015243	RBFOX3	78	86.667	ENSPNYG00000009079	-	73	86.207	Pundamilia_nyererei
ENSPVAG00000015243	RBFOX3	83	79.592	ENSPNAG00000018173	rbfox3b	76	82.759	Pygocentrus_nattereri
ENSPVAG00000015243	RBFOX3	96	62.286	ENSPNAG00000002889	rbfox3a	93	48.433	Pygocentrus_nattereri
ENSPVAG00000015243	RBFOX3	96	87.861	ENSRNOG00000003386	Rbfox3	92	87.861	Rattus_norvegicus
ENSPVAG00000015243	RBFOX3	96	83.188	ENSRBIG00000040449	RBFOX3	77	93.103	Rhinopithecus_bieti
ENSPVAG00000015243	RBFOX3	96	83.188	ENSRROG00000000766	RBFOX3	95	73.623	Rhinopithecus_roxellana
ENSPVAG00000015243	RBFOX3	96	86.087	ENSSBOG00000031591	RBFOX3	96	85.217	Saimiri_boliviensis_boliviensis
ENSPVAG00000015243	RBFOX3	96	65.252	ENSSHAG00000016076	RBFOX3	95	60.870	Sarcophilus_harrisii
ENSPVAG00000015243	RBFOX3	96	64.655	ENSSFOG00015023260	rbfox3a	81	62.931	Scleropages_formosus
ENSPVAG00000015243	RBFOX3	96	52.874	ENSSFOG00015004716	RBFOX3	84	52.161	Scleropages_formosus
ENSPVAG00000015243	RBFOX3	100	61.214	ENSSMAG00000012618	rbfox3b	71	56.593	Scophthalmus_maximus
ENSPVAG00000015243	RBFOX3	100	62.431	ENSSMAG00000019052	-	95	57.925	Scophthalmus_maximus
ENSPVAG00000015243	RBFOX3	100	54.972	ENSSDUG00000023183	rbfox3b	95	50.720	Seriola_dumerili
ENSPVAG00000015243	RBFOX3	78	76.364	ENSSDUG00000015801	-	73	86.207	Seriola_dumerili
ENSPVAG00000015243	RBFOX3	80	83.673	ENSSLDG00000016098	-	71	86.207	Seriola_lalandi_dorsalis
ENSPVAG00000015243	RBFOX3	100	63.812	ENSSLDG00000000149	rbfox3b	81	59.366	Seriola_lalandi_dorsalis
ENSPVAG00000015243	RBFOX3	96	69.452	ENSSPUG00000011733	RBFOX3	95	68.876	Sphenodon_punctatus
ENSPVAG00000015243	RBFOX3	88	57.500	ENSSPAG00000004898	-	75	54.000	Stegastes_partitus
ENSPVAG00000015243	RBFOX3	83	77.551	ENSSPAG00000017571	rbfox3b	71	86.207	Stegastes_partitus
ENSPVAG00000015243	RBFOX3	88	84.858	ENSSSCG00000039498	RBFOX3	96	84.858	Sus_scrofa
ENSPVAG00000015243	RBFOX3	100	60.388	ENSTRUG00000004894	rbfox3b	86	57.345	Takifugu_rubripes
ENSPVAG00000015243	RBFOX3	100	58.376	ENSTNIG00000011278	rbfox3b	82	54.090	Tetraodon_nigroviridis
ENSPVAG00000015243	RBFOX3	88	58.044	ENSTBEG00000004296	-	59	71.429	Tupaia_belangeri
ENSPVAG00000015243	RBFOX3	96	81.449	ENSTTRG00000003676	RBFOX3	96	80.580	Tursiops_truncatus
ENSPVAG00000015243	RBFOX3	96	74.493	ENSUAMG00000004668	RBFOX3	95	71.884	Ursus_americanus
ENSPVAG00000015243	RBFOX3	96	87.283	ENSVVUG00000017864	RBFOX3	85	86.416	Vulpes_vulpes
ENSPVAG00000015243	RBFOX3	100	58.056	ENSXETG00000020236	rbfox3	61	81.429	Xenopus_tropicalis
ENSPVAG00000015243	RBFOX3	92	75.000	ENSXCOG00000018262	rbfox3b	95	84.000	Xiphophorus_couchianus
ENSPVAG00000015243	RBFOX3	100	63.812	ENSXMAG00000012939	rbfox3b	81	59.366	Xiphophorus_maculatus