EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000015597 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 10895 bases
Position: chrGeneScaffold_1294:203108-214002
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000014705	zf-U1	PF06220.12	6.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000015596	SNRPC-201	546	-	ENSPVAP00000014705	181 (aa)	-	UPI00018B42B3

Gene Model

Click here to download ENSPVAG00000015597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000015597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000015597	SNRPC	100	93.923	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSPVAG00000015597	SNRPC	100	93.923	ENSAMEG00000000963	SNRPC	100	93.923	Ailuropoda_melanoleuca
ENSPVAG00000015597	SNRPC	94	90.588	ENSACAG00000015721	SNRPC	94	90.588	Anolis_carolinensis
ENSPVAG00000015597	SNRPC	87	74.522	ENSANAG00000021444	-	61	79.167	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	87	86.624	ENSANAG00000021026	-	100	78.616	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	100	93.923	ENSANAG00000019696	-	99	98.726	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	87	98.089	ENSANAG00000007843	-	99	98.089	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	93	83.140	ENSANAG00000019726	-	100	83.721	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	87	94.268	ENSANAG00000019157	-	100	93.082	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	87	91.083	ENSANAG00000020588	-	91	91.667	Aotus_nancymaae
ENSPVAG00000015597	SNRPC	87	83.439	ENSAMXG00000032641	snrpc	87	82.390	Astyanax_mexicanus
ENSPVAG00000015597	SNRPC	87	98.726	ENSBTAG00000024549	SNRPC	99	98.726	Bos_taurus
ENSPVAG00000015597	SNRPC	87	97.452	ENSCJAG00000043055	-	99	97.452	Callithrix_jacchus
ENSPVAG00000015597	SNRPC	87	96.178	ENSCJAG00000041822	-	99	96.178	Callithrix_jacchus
ENSPVAG00000015597	SNRPC	100	92.818	ENSCJAG00000015321	-	99	98.726	Callithrix_jacchus
ENSPVAG00000015597	SNRPC	87	77.070	ENSCAFG00000025525	-	100	76.101	Canis_familiaris
ENSPVAG00000015597	SNRPC	87	94.268	ENSCAFG00000031775	-	100	93.082	Canis_familiaris
ENSPVAG00000015597	SNRPC	87	96.203	ENSCAFG00000028988	-	99	96.203	Canis_familiaris
ENSPVAG00000015597	SNRPC	64	98.276	ENSCAFG00000001231	-	91	98.276	Canis_familiaris
ENSPVAG00000015597	SNRPC	91	85.976	ENSCAFG00020009944	-	93	85.976	Canis_lupus_dingo
ENSPVAG00000015597	SNRPC	87	77.273	ENSCAFG00020026577	-	100	82.584	Canis_lupus_dingo
ENSPVAG00000015597	SNRPC	87	94.268	ENSCAFG00020017383	-	100	93.082	Canis_lupus_dingo
ENSPVAG00000015597	SNRPC	87	98.726	ENSCAFG00020005945	-	99	98.726	Canis_lupus_dingo
ENSPVAG00000015597	SNRPC	88	94.340	ENSCAFG00020005758	-	100	94.340	Canis_lupus_dingo
ENSPVAG00000015597	SNRPC	87	98.089	ENSCHIG00000012087	-	99	98.089	Capra_hircus
ENSPVAG00000015597	SNRPC	87	71.338	ENSCHIG00000005039	-	100	69.182	Capra_hircus
ENSPVAG00000015597	SNRPC	85	88.961	ENSTSYG00000029745	-	63	90.400	Carlito_syrichta
ENSPVAG00000015597	SNRPC	87	98.726	ENSTSYG00000011216	-	99	98.726	Carlito_syrichta
ENSPVAG00000015597	SNRPC	87	81.529	ENSTSYG00000025721	-	100	71.698	Carlito_syrichta
ENSPVAG00000015597	SNRPC	78	99.296	ENSCAPG00000005161	SNRPC	100	99.296	Cavia_aperea
ENSPVAG00000015597	SNRPC	87	98.726	ENSCPOG00000008563	SNRPC	99	98.726	Cavia_porcellus
ENSPVAG00000015597	SNRPC	86	80.000	ENSCCAG00000026624	-	66	73.248	Cebus_capucinus
ENSPVAG00000015597	SNRPC	87	68.153	ENSCCAG00000028293	-	63	85.366	Cebus_capucinus
ENSPVAG00000015597	SNRPC	87	92.994	ENSCCAG00000036059	-	89	91.824	Cebus_capucinus
ENSPVAG00000015597	SNRPC	89	89.441	ENSCCAG00000022751	-	98	89.441	Cebus_capucinus
ENSPVAG00000015597	SNRPC	100	72.376	ENSCCAG00000022209	-	100	72.376	Cebus_capucinus
ENSPVAG00000015597	SNRPC	99	93.296	ENSCATG00000035787	SNRPC	99	98.726	Cercocebus_atys
ENSPVAG00000015597	SNRPC	86	81.410	ENSCLAG00000010242	-	96	81.410	Chinchilla_lanigera
ENSPVAG00000015597	SNRPC	87	98.726	ENSCLAG00000016920	SNRPC	99	98.726	Chinchilla_lanigera
ENSPVAG00000015597	SNRPC	87	77.841	ENSCSAG00000009821	SNRPC	100	83.146	Chlorocebus_sabaeus
ENSPVAG00000015597	SNRPC	88	81.761	ENSCHOG00000011439	SNRPC	93	80.120	Choloepus_hoffmanni
ENSPVAG00000015597	SNRPC	87	96.178	ENSCPBG00000027142	SNRPC	99	96.178	Chrysemys_picta_bellii
ENSPVAG00000015597	SNRPC	84	47.368	ENSCING00000021229	ci-zf(matrin)-4	51	79.032	Ciona_intestinalis
ENSPVAG00000015597	SNRPC	87	98.726	ENSCANG00000028035	SNRPC	99	98.726	Colobus_angolensis_palliatus
ENSPVAG00000015597	SNRPC	87	85.987	ENSCGRG00001021483	-	100	83.019	Cricetulus_griseus_chok1gshd
ENSPVAG00000015597	SNRPC	87	98.089	ENSCGRG00001009011	-	99	98.089	Cricetulus_griseus_chok1gshd
ENSPVAG00000015597	SNRPC	88	98.113	ENSCGRG00000005005	Snrpc	100	98.113	Cricetulus_griseus_crigri
ENSPVAG00000015597	SNRPC	87	83.439	ENSDARG00000009871	snrpc	100	82.390	Danio_rerio
ENSPVAG00000015597	SNRPC	87	97.452	ENSDNOG00000034699	-	98	97.452	Dasypus_novemcinctus
ENSPVAG00000015597	SNRPC	65	97.436	ENSDNOG00000042403	-	93	97.436	Dasypus_novemcinctus
ENSPVAG00000015597	SNRPC	82	79.866	ENSDORG00000029823	-	56	90.909	Dipodomys_ordii
ENSPVAG00000015597	SNRPC	99	80.000	ENSDORG00000005955	Snrpc	75	78.333	Dipodomys_ordii
ENSPVAG00000015597	SNRPC	85	94.805	ENSETEG00000008268	-	100	93.590	Echinops_telfairi
ENSPVAG00000015597	SNRPC	85	90.909	ENSETEG00000011265	-	100	89.744	Echinops_telfairi
ENSPVAG00000015597	SNRPC	58	81.905	ENSETEG00000008756	-	94	80.808	Echinops_telfairi
ENSPVAG00000015597	SNRPC	87	98.726	ENSEASG00005021007	SNRPC	99	98.726	Equus_asinus_asinus
ENSPVAG00000015597	SNRPC	87	98.726	ENSECAG00000026848	SNRPC	99	98.726	Equus_caballus
ENSPVAG00000015597	SNRPC	100	74.586	ENSEEUG00000014633	SNRPC	100	74.586	Erinaceus_europaeus
ENSPVAG00000015597	SNRPC	87	77.070	ENSELUG00000000815	SNRPC	50	89.744	Esox_lucius
ENSPVAG00000015597	SNRPC	97	94.886	ENSFCAG00000044077	-	99	98.726	Felis_catus
ENSPVAG00000015597	SNRPC	87	91.720	ENSFCAG00000031775	-	87	91.720	Felis_catus
ENSPVAG00000015597	SNRPC	87	97.452	ENSFALG00000003756	SNRPC	99	97.452	Ficedula_albicollis
ENSPVAG00000015597	SNRPC	87	98.726	ENSFDAG00000018111	SNRPC	99	98.726	Fukomys_damarensis
ENSPVAG00000015597	SNRPC	87	95.570	ENSGALG00000002773	SNRPC	99	95.570	Gallus_gallus
ENSPVAG00000015597	SNRPC	87	96.178	ENSGAGG00000003063	SNRPC	99	96.178	Gopherus_agassizii
ENSPVAG00000015597	SNRPC	87	98.726	ENSGGOG00000012499	SNRPC	99	98.726	Gorilla_gorilla
ENSPVAG00000015597	SNRPC	70	74.016	ENSHGLG00000005871	-	100	73.585	Heterocephalus_glaber_female
ENSPVAG00000015597	SNRPC	87	79.618	ENSHGLG00000017741	-	100	76.101	Heterocephalus_glaber_female
ENSPVAG00000015597	SNRPC	87	98.726	ENSHGLG00000013981	SNRPC	99	99.359	Heterocephalus_glaber_female
ENSPVAG00000015597	SNRPC	87	93.631	ENSHGLG00100017764	-	100	92.453	Heterocephalus_glaber_male
ENSPVAG00000015597	SNRPC	87	98.726	ENSHGLG00100009478	SNRPC	99	99.359	Heterocephalus_glaber_male
ENSPVAG00000015597	SNRPC	87	79.618	ENSHGLG00100010786	-	100	76.101	Heterocephalus_glaber_male
ENSPVAG00000015597	SNRPC	87	84.076	ENSIPUG00000024851	snrpc	100	83.019	Ictalurus_punctatus
ENSPVAG00000015597	SNRPC	87	98.726	ENSSTOG00000013786	SNRPC	99	98.726	Ictidomys_tridecemlineatus
ENSPVAG00000015597	SNRPC	87	98.089	ENSJJAG00000021741	Snrpc	99	98.089	Jaculus_jaculus
ENSPVAG00000015597	SNRPC	91	85.119	ENSLACG00000013753	SNRPC	93	86.905	Latimeria_chalumnae
ENSPVAG00000015597	SNRPC	87	98.726	ENSLAFG00000013534	SNRPC	99	98.726	Loxodonta_africana
ENSPVAG00000015597	SNRPC	100	86.188	ENSMFAG00000031764	-	99	98.726	Macaca_fascicularis
ENSPVAG00000015597	SNRPC	87	98.089	ENSMFAG00000030525	-	99	98.089	Macaca_fascicularis
ENSPVAG00000015597	SNRPC	87	97.452	ENSMMUG00000039415	-	99	97.452	Macaca_mulatta
ENSPVAG00000015597	SNRPC	86	99.359	ENSMMUG00000000869	-	95	99.359	Macaca_mulatta
ENSPVAG00000015597	SNRPC	87	89.172	ENSMMUG00000045425	-	100	88.050	Macaca_mulatta
ENSPVAG00000015597	SNRPC	100	93.370	ENSMNEG00000032731	SNRPC	99	98.726	Macaca_nemestrina
ENSPVAG00000015597	SNRPC	94	85.294	ENSMLEG00000040224	-	97	85.294	Mandrillus_leucophaeus
ENSPVAG00000015597	SNRPC	85	72.078	ENSMLEG00000039724	-	81	70.779	Mandrillus_leucophaeus
ENSPVAG00000015597	SNRPC	100	93.923	ENSMLEG00000033916	-	99	98.726	Mandrillus_leucophaeus
ENSPVAG00000015597	SNRPC	87	95.541	ENSMGAG00000006054	SNRPC	99	95.541	Meleagris_gallopavo
ENSPVAG00000015597	SNRPC	92	83.234	ENSMICG00000036552	-	92	77.246	Microcebus_murinus
ENSPVAG00000015597	SNRPC	87	86.624	ENSMICG00000009130	-	100	86.164	Microcebus_murinus
ENSPVAG00000015597	SNRPC	100	89.503	ENSMICG00000007339	-	99	98.089	Microcebus_murinus
ENSPVAG00000015597	SNRPC	87	98.089	ENSMICG00000032183	-	99	98.089	Microcebus_murinus
ENSPVAG00000015597	SNRPC	87	98.089	ENSMOCG00000017609	Snrpc	99	98.089	Microtus_ochrogaster
ENSPVAG00000015597	SNRPC	87	97.452	ENSMODG00000013904	-	99	97.452	Monodelphis_domestica
ENSPVAG00000015597	SNRPC	87	64.968	ENSMALG00000001197	snrpc	100	64.634	Monopterus_albus
ENSPVAG00000015597	SNRPC	87	98.089	MGP_CAROLIEiJ_G0021308	Snrpc	99	98.089	Mus_caroli
ENSPVAG00000015597	SNRPC	87	98.089	ENSMUSG00000024217	Snrpc	99	98.089	Mus_musculus
ENSPVAG00000015597	SNRPC	64	97.414	MGP_SPRETEiJ_G0022221	-	97	97.414	Mus_spretus
ENSPVAG00000015597	SNRPC	88	98.742	ENSMPUG00000003210	SNRPC	100	98.742	Mustela_putorius_furo
ENSPVAG00000015597	SNRPC	88	98.742	ENSMLUG00000002488	SNRPC	100	98.742	Myotis_lucifugus
ENSPVAG00000015597	SNRPC	87	98.089	ENSNGAG00000019686	Snrpc	99	98.089	Nannospalax_galili
ENSPVAG00000015597	SNRPC	100	93.923	ENSNLEG00000034810	SNRPC	99	98.726	Nomascus_leucogenys
ENSPVAG00000015597	SNRPC	78	98.592	ENSMEUG00000009300	SNRPC	100	98.592	Notamacropus_eugenii
ENSPVAG00000015597	SNRPC	87	98.726	ENSODEG00000020370	-	99	98.726	Octodon_degus
ENSPVAG00000015597	SNRPC	87	97.452	ENSODEG00000019633	-	99	97.452	Octodon_degus
ENSPVAG00000015597	SNRPC	87	98.726	ENSODEG00000018985	-	99	98.726	Octodon_degus
ENSPVAG00000015597	SNRPC	67	92.562	ENSODEG00000006008	-	88	91.057	Octodon_degus
ENSPVAG00000015597	SNRPC	87	98.089	ENSODEG00000020201	-	99	98.089	Octodon_degus
ENSPVAG00000015597	SNRPC	87	98.726	ENSODEG00000017080	-	99	98.726	Octodon_degus
ENSPVAG00000015597	SNRPC	80	94.595	ENSOANG00000003405	SNRPC	100	94.595	Ornithorhynchus_anatinus
ENSPVAG00000015597	SNRPC	89	95.652	ENSOCUG00000026430	-	100	95.652	Oryctolagus_cuniculus
ENSPVAG00000015597	SNRPC	87	98.726	ENSOCUG00000026668	-	99	98.726	Oryctolagus_cuniculus
ENSPVAG00000015597	SNRPC	87	96.178	ENSOCUG00000023292	-	99	96.178	Oryctolagus_cuniculus
ENSPVAG00000015597	SNRPC	99	93.333	ENSOGAG00000008755	-	100	93.889	Otolemur_garnettii
ENSPVAG00000015597	SNRPC	85	83.007	ENSOGAG00000028405	-	99	80.392	Otolemur_garnettii
ENSPVAG00000015597	SNRPC	87	96.815	ENSOGAG00000026269	-	99	96.815	Otolemur_garnettii
ENSPVAG00000015597	SNRPC	87	98.726	ENSOARG00000010823	SNRPC	99	98.726	Ovis_aries
ENSPVAG00000015597	SNRPC	87	98.726	ENSPPAG00000043871	SNRPC	99	98.726	Pan_paniscus
ENSPVAG00000015597	SNRPC	91	56.886	ENSPPRG00000016017	-	93	53.293	Panthera_pardus
ENSPVAG00000015597	SNRPC	99	93.855	ENSPPRG00000008647	-	99	98.726	Panthera_pardus
ENSPVAG00000015597	SNRPC	99	93.855	ENSPTIG00000021867	-	99	98.726	Panthera_tigris_altaica
ENSPVAG00000015597	SNRPC	85	58.170	ENSPTIG00000013329	-	50	77.922	Panthera_tigris_altaica
ENSPVAG00000015597	SNRPC	87	98.726	ENSPTRG00000018070	SNRPC	99	98.726	Pan_troglodytes
ENSPVAG00000015597	SNRPC	87	87.261	ENSPANG00000018228	-	95	85.714	Papio_anubis
ENSPVAG00000015597	SNRPC	99	93.296	ENSPANG00000022802	-	99	98.726	Papio_anubis
ENSPVAG00000015597	SNRPC	51	84.783	ENSPKIG00000003136	snrpc	50	87.179	Paramormyrops_kingsleyae
ENSPVAG00000015597	SNRPC	99	84.865	ENSPSIG00000004876	SNRPC	91	84.865	Pelodiscus_sinensis
ENSPVAG00000015597	SNRPC	87	98.089	ENSPEMG00000010773	Snrpc	99	98.089	Peromyscus_maniculatus_bairdii
ENSPVAG00000015597	SNRPC	87	85.987	ENSPEMG00000002763	-	100	83.019	Peromyscus_maniculatus_bairdii
ENSPVAG00000015597	SNRPC	95	93.605	ENSPCAG00000016885	SNRPC	95	93.605	Procavia_capensis
ENSPVAG00000015597	SNRPC	100	94.475	ENSPCOG00000004904	SNRPC	99	98.726	Propithecus_coquereli
ENSPVAG00000015597	SNRPC	87	98.089	ENSRNOG00000000493	Snrpc	99	98.089	Rattus_norvegicus
ENSPVAG00000015597	SNRPC	87	98.089	ENSRBIG00000014819	-	99	98.089	Rhinopithecus_bieti
ENSPVAG00000015597	SNRPC	91	83.626	ENSRBIG00000036353	-	86	85.542	Rhinopithecus_bieti
ENSPVAG00000015597	SNRPC	87	98.089	ENSRBIG00000022998	-	99	98.089	Rhinopithecus_bieti
ENSPVAG00000015597	SNRPC	100	93.923	ENSRBIG00000037567	-	99	98.726	Rhinopithecus_bieti
ENSPVAG00000015597	SNRPC	100	93.923	ENSRROG00000041300	SNRPC	99	98.726	Rhinopithecus_roxellana
ENSPVAG00000015597	SNRPC	100	92.818	ENSSBOG00000031528	-	99	98.726	Saimiri_boliviensis_boliviensis
ENSPVAG00000015597	SNRPC	82	82.432	ENSSBOG00000032361	-	66	78.125	Saimiri_boliviensis_boliviensis
ENSPVAG00000015597	SNRPC	85	81.818	ENSSBOG00000023189	-	91	80.769	Saimiri_boliviensis_boliviensis
ENSPVAG00000015597	SNRPC	87	79.747	ENSSBOG00000032882	-	95	79.747	Saimiri_boliviensis_boliviensis
ENSPVAG00000015597	SNRPC	100	88.398	ENSSHAG00000000945	-	100	88.398	Sarcophilus_harrisii
ENSPVAG00000015597	SNRPC	87	79.618	ENSSFOG00015019150	snrpc	100	78.616	Scleropages_formosus
ENSPVAG00000015597	SNRPC	94	74.269	ENSSARG00000008970	SNRPC	93	75.449	Sorex_araneus
ENSPVAG00000015597	SNRPC	87	96.815	ENSSPUG00000002502	SNRPC	99	96.815	Sphenodon_punctatus
ENSPVAG00000015597	SNRPC	87	98.726	ENSSSCG00000001531	SNRPC	99	98.726	Sus_scrofa
ENSPVAG00000015597	SNRPC	87	98.089	ENSTGUG00000001773	SNRPC	99	98.089	Taeniopygia_guttata
ENSPVAG00000015597	SNRPC	85	72.078	ENSTBEG00000015356	-	68	87.500	Tupaia_belangeri
ENSPVAG00000015597	SNRPC	78	71.831	ENSTBEG00000016759	-	79	71.831	Tupaia_belangeri
ENSPVAG00000015597	SNRPC	85	90.909	ENSTBEG00000013022	-	100	89.744	Tupaia_belangeri
ENSPVAG00000015597	SNRPC	100	95.604	ENSTTRG00000007827	SNRPC	100	95.604	Tursiops_truncatus
ENSPVAG00000015597	SNRPC	65	97.436	ENSUAMG00000014125	SNRPC	79	97.436	Ursus_americanus
ENSPVAG00000015597	SNRPC	87	88.068	ENSUMAG00000010869	SNRPC	99	88.068	Ursus_maritimus
ENSPVAG00000015597	SNRPC	100	62.983	ENSVPAG00000003106	SNRPC	100	62.983	Vicugna_pacos
ENSPVAG00000015597	SNRPC	85	94.156	ENSVVUG00000010467	-	92	91.018	Vulpes_vulpes
ENSPVAG00000015597	SNRPC	87	98.089	ENSVVUG00000021947	-	99	98.089	Vulpes_vulpes
ENSPVAG00000015597	SNRPC	87	88.535	ENSXETG00000024721	snrpc	100	87.421	Xenopus_tropicalis