EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000015617 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 100178 bases
Position: chrscaffold_1168:96741-196918
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000014728	ResIII	PF04851.15	1.9e-05	1	1
ENSPVAP00000014728	BRK	PF07533.16	2.1e-30	1	2
ENSPVAP00000014728	BRK	PF07533.16	2.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000015620	CHD9-201	8553	-	ENSPVAP00000014728	2850 (aa)	-	UPI00018B3331

Gene Model

Click here to download ENSPVAG00000015617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000015617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000015617	CHD9	71	64.025	ENSPVAG00000000272	CHD8	74	64.103
ENSPVAG00000015617	CHD9	67	69.672	ENSPVAG00000011873	CHD7	82	69.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000015617	CHD9	98	93.032	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSPVAG00000015617	CHD9	85	72.663	ENSAPOG00000023034	chd9	94	72.601	Acanthochromis_polyacanthus
ENSPVAG00000015617	CHD9	98	94.925	ENSAMEG00000016232	CHD9	97	95.010	Ailuropoda_melanoleuca
ENSPVAG00000015617	CHD9	78	71.860	ENSACIG00000004097	chd9	82	57.771	Amphilophus_citrinellus
ENSPVAG00000015617	CHD9	81	74.186	ENSAOCG00000005487	chd9	96	72.601	Amphiprion_ocellaris
ENSPVAG00000015617	CHD9	90	73.031	ENSAPEG00000009859	chd9	95	72.601	Amphiprion_percula
ENSPVAG00000015617	CHD9	81	74.781	ENSATEG00000002748	chd9	97	59.538	Anabas_testudineus
ENSPVAG00000015617	CHD9	97	80.689	ENSAPLG00000002826	CHD9	85	80.689	Anas_platyrhynchos
ENSPVAG00000015617	CHD9	97	77.979	ENSACAG00000016150	CHD9	95	78.091	Anolis_carolinensis
ENSPVAG00000015617	CHD9	98	93.321	ENSANAG00000015630	CHD9	97	93.180	Aotus_nancymaae
ENSPVAG00000015617	CHD9	76	73.132	ENSACLG00000016899	chd9	83	58.804	Astatotilapia_calliptera
ENSPVAG00000015617	CHD9	78	73.798	ENSAMXG00000005652	chd9	96	57.729	Astyanax_mexicanus
ENSPVAG00000015617	CHD9	98	93.509	ENSBTAG00000002287	CHD9	97	93.276	Bos_taurus
ENSPVAG00000015617	CHD9	98	90.899	ENSCJAG00000001573	CHD9	90	100.000	Callithrix_jacchus
ENSPVAG00000015617	CHD9	98	95.202	ENSCAFG00000009699	CHD9	97	95.101	Canis_familiaris
ENSPVAG00000015617	CHD9	98	95.202	ENSCAFG00020002879	CHD9	97	95.101	Canis_lupus_dingo
ENSPVAG00000015617	CHD9	84	90.463	ENSCHIG00000021000	CHD9	85	90.463	Capra_hircus
ENSPVAG00000015617	CHD9	98	94.068	ENSTSYG00000007693	CHD9	97	94.135	Carlito_syrichta
ENSPVAG00000015617	CHD9	80	72.818	ENSCAPG00000011604	CHD9	81	73.408	Cavia_aperea
ENSPVAG00000015617	CHD9	98	88.889	ENSCPOG00000036544	CHD9	97	87.692	Cavia_porcellus
ENSPVAG00000015617	CHD9	98	90.842	ENSCCAG00000036178	CHD9	90	100.000	Cebus_capucinus
ENSPVAG00000015617	CHD9	98	92.105	ENSCATG00000036753	CHD9	90	100.000	Cercocebus_atys
ENSPVAG00000015617	CHD9	97	92.610	ENSCLAG00000007137	CHD9	97	92.404	Chinchilla_lanigera
ENSPVAG00000015617	CHD9	98	93.146	ENSCSAG00000005311	CHD9	97	93.289	Chlorocebus_sabaeus
ENSPVAG00000015617	CHD9	70	98.077	ENSCHOG00000003935	CHD9	73	98.077	Choloepus_hoffmanni
ENSPVAG00000015617	CHD9	97	82.421	ENSCPBG00000012459	CHD9	96	87.149	Chrysemys_picta_bellii
ENSPVAG00000015617	CHD9	98	93.703	ENSCANG00000030349	CHD9	97	93.666	Colobus_angolensis_palliatus
ENSPVAG00000015617	CHD9	97	88.739	ENSCGRG00001016150	Chd9	97	87.959	Cricetulus_griseus_chok1gshd
ENSPVAG00000015617	CHD9	97	88.739	ENSCGRG00000012850	Chd9	99	86.705	Cricetulus_griseus_crigri
ENSPVAG00000015617	CHD9	81	71.927	ENSCSEG00000009209	chd9	78	71.965	Cynoglossus_semilaevis
ENSPVAG00000015617	CHD9	83	72.971	ENSCVAG00000016195	chd9	84	57.755	Cyprinodon_variegatus
ENSPVAG00000015617	CHD9	78	72.253	ENSDARG00000074498	chd9	94	71.108	Danio_rerio
ENSPVAG00000015617	CHD9	78	92.286	ENSDNOG00000006045	CHD9	96	92.123	Dasypus_novemcinctus
ENSPVAG00000015617	CHD9	67	89.212	ENSDORG00000008523	-	95	89.272	Dipodomys_ordii
ENSPVAG00000015617	CHD9	94	97.895	ENSETEG00000009565	CHD9	93	97.895	Echinops_telfairi
ENSPVAG00000015617	CHD9	97	94.919	ENSEASG00005014832	CHD9	96	96.386	Equus_asinus_asinus
ENSPVAG00000015617	CHD9	98	94.549	ENSECAG00000011505	CHD9	97	94.626	Equus_caballus
ENSPVAG00000015617	CHD9	75	99.291	ENSEEUG00000014515	CHD9	81	99.291	Erinaceus_europaeus
ENSPVAG00000015617	CHD9	78	73.318	ENSELUG00000006031	chd9	94	72.755	Esox_lucius
ENSPVAG00000015617	CHD9	98	94.727	ENSFCAG00000022534	CHD9	97	95.096	Felis_catus
ENSPVAG00000015617	CHD9	80	85.171	ENSFALG00000013276	CHD9	96	85.171	Ficedula_albicollis
ENSPVAG00000015617	CHD9	98	92.460	ENSFDAG00000021037	CHD9	97	92.300	Fukomys_damarensis
ENSPVAG00000015617	CHD9	81	73.646	ENSFHEG00000006068	chd9	78	72.283	Fundulus_heteroclitus
ENSPVAG00000015617	CHD9	64	80.315	ENSGMOG00000006040	chd9	80	80.315	Gadus_morhua
ENSPVAG00000015617	CHD9	93	82.334	ENSGALG00000039178	CHD9	97	82.165	Gallus_gallus
ENSPVAG00000015617	CHD9	81	73.806	ENSGAFG00000010014	chd9	63	72.270	Gambusia_affinis
ENSPVAG00000015617	CHD9	76	72.915	ENSGACG00000016694	chd9	93	72.915	Gasterosteus_aculeatus
ENSPVAG00000015617	CHD9	98	93.697	ENSGGOG00000014816	CHD9	97	93.660	Gorilla_gorilla
ENSPVAG00000015617	CHD9	76	73.588	ENSHBUG00000023322	chd9	87	86.567	Haplochromis_burtoni
ENSPVAG00000015617	CHD9	98	90.452	ENSHGLG00000014938	CHD9	97	90.673	Heterocephalus_glaber_female
ENSPVAG00000015617	CHD9	86	65.994	ENSHCOG00000000937	chd9	77	72.900	Hippocampus_comes
ENSPVAG00000015617	CHD9	79	73.317	ENSIPUG00000016448	chd9	90	85.075	Ictalurus_punctatus
ENSPVAG00000015617	CHD9	98	91.329	ENSSTOG00000022273	CHD9	97	90.786	Ictidomys_tridecemlineatus
ENSPVAG00000015617	CHD9	67	88.878	ENSJJAG00000015741	-	95	89.028	Jaculus_jaculus
ENSPVAG00000015617	CHD9	82	72.742	ENSKMAG00000016784	chd9	91	72.601	Kryptolebias_marmoratus
ENSPVAG00000015617	CHD9	76	72.958	ENSLBEG00000012077	chd9	95	71.308	Labrus_bergylta
ENSPVAG00000015617	CHD9	97	71.483	ENSLACG00000005557	CHD9	84	72.321	Latimeria_chalumnae
ENSPVAG00000015617	CHD9	85	75.926	ENSLOCG00000007225	chd9	96	76.059	Lepisosteus_oculatus
ENSPVAG00000015617	CHD9	98	92.756	ENSLAFG00000015374	CHD9	97	92.795	Loxodonta_africana
ENSPVAG00000015617	CHD9	98	93.797	ENSMFAG00000041354	CHD9	97	93.762	Macaca_fascicularis
ENSPVAG00000015617	CHD9	98	93.797	ENSMMUG00000016310	CHD9	97	93.762	Macaca_mulatta
ENSPVAG00000015617	CHD9	98	93.709	ENSMNEG00000031494	CHD9	97	94.459	Macaca_nemestrina
ENSPVAG00000015617	CHD9	98	93.703	ENSMLEG00000043219	CHD9	97	93.666	Mandrillus_leucophaeus
ENSPVAG00000015617	CHD9	81	73.997	ENSMAMG00000003909	chd9	94	58.383	Mastacembelus_armatus
ENSPVAG00000015617	CHD9	81	74.385	ENSMZEG00005006581	chd9	79	72.967	Maylandia_zebra
ENSPVAG00000015617	CHD9	92	77.756	ENSMGAG00000004642	CHD9	70	85.172	Meleagris_gallopavo
ENSPVAG00000015617	CHD9	98	93.402	ENSMICG00000016679	CHD9	97	93.455	Microcebus_murinus
ENSPVAG00000015617	CHD9	82	73.113	ENSMMOG00000016406	chd9	84	58.583	Mola_mola
ENSPVAG00000015617	CHD9	70	85.599	ENSMODG00000013142	-	94	89.310	Monodelphis_domestica
ENSPVAG00000015617	CHD9	81	73.419	ENSMALG00000013306	chd9	81	58.986	Monopterus_albus
ENSPVAG00000015617	CHD9	97	87.044	MGP_CAROLIEiJ_G0031364	Chd9	97	86.372	Mus_caroli
ENSPVAG00000015617	CHD9	97	86.237	ENSMUSG00000056608	Chd9	99	85.566	Mus_musculus
ENSPVAG00000015617	CHD9	97	85.658	MGP_PahariEiJ_G0022964	Chd9	97	85.424	Mus_pahari
ENSPVAG00000015617	CHD9	97	86.814	MGP_SPRETEiJ_G0032483	Chd9	97	86.237	Mus_spretus
ENSPVAG00000015617	CHD9	98	93.503	ENSMPUG00000003285	CHD9	97	93.365	Mustela_putorius_furo
ENSPVAG00000015617	CHD9	98	92.844	ENSMLUG00000004456	CHD9	97	92.788	Myotis_lucifugus
ENSPVAG00000015617	CHD9	81	74.385	ENSNBRG00000009423	chd9	79	72.798	Neolamprologus_brichardi
ENSPVAG00000015617	CHD9	87	95.065	ENSNLEG00000001026	CHD9	97	95.065	Nomascus_leucogenys
ENSPVAG00000015617	CHD9	72	98.214	ENSMEUG00000008222	-	79	98.214	Notamacropus_eugenii
ENSPVAG00000015617	CHD9	81	100.000	ENSOPRG00000011168	CHD9	80	100.000	Ochotona_princeps
ENSPVAG00000015617	CHD9	97	92.123	ENSODEG00000004466	CHD9	97	91.451	Octodon_degus
ENSPVAG00000015617	CHD9	77	74.426	ENSONIG00000002816	chd9	96	72.840	Oreochromis_niloticus
ENSPVAG00000015617	CHD9	100	80.626	ENSOANG00000013401	CHD9	97	86.372	Ornithorhynchus_anatinus
ENSPVAG00000015617	CHD9	81	94.262	ENSOCUG00000001016	CHD9	96	94.044	Oryctolagus_cuniculus
ENSPVAG00000015617	CHD9	81	74.104	ENSORLG00000013810	chd9	96	57.672	Oryzias_latipes
ENSPVAG00000015617	CHD9	81	73.083	ENSORLG00020020665	chd9	84	58.228	Oryzias_latipes_hni
ENSPVAG00000015617	CHD9	81	74.024	ENSORLG00015019126	chd9	94	58.333	Oryzias_latipes_hsok
ENSPVAG00000015617	CHD9	98	93.321	ENSOGAG00000002110	CHD9	97	93.564	Otolemur_garnettii
ENSPVAG00000015617	CHD9	98	93.039	ENSOARG00000017664	CHD9	97	92.988	Ovis_aries
ENSPVAG00000015617	CHD9	80	93.503	ENSPPAG00000039388	-	96	93.558	Pan_paniscus
ENSPVAG00000015617	CHD9	98	94.539	ENSPPRG00000004801	CHD9	97	94.904	Panthera_pardus
ENSPVAG00000015617	CHD9	98	94.821	ENSPTIG00000021854	CHD9	97	95.192	Panthera_tigris_altaica
ENSPVAG00000015617	CHD9	98	94.068	ENSPTRG00000008113	CHD9	97	94.038	Pan_troglodytes
ENSPVAG00000015617	CHD9	98	93.797	ENSPANG00000019307	CHD9	97	93.762	Papio_anubis
ENSPVAG00000015617	CHD9	96	56.517	ENSPKIG00000025401	-	84	56.716	Paramormyrops_kingsleyae
ENSPVAG00000015617	CHD9	94	59.768	ENSPKIG00000021876	chd9	78	73.680	Paramormyrops_kingsleyae
ENSPVAG00000015617	CHD9	60	80.056	ENSPSIG00000008099	CHD9	94	80.056	Pelodiscus_sinensis
ENSPVAG00000015617	CHD9	56	65.129	ENSPMAG00000006035	-	68	65.129	Petromyzon_marinus
ENSPVAG00000015617	CHD9	86	84.918	ENSPCIG00000017215	CHD9	97	90.278	Phascolarctos_cinereus
ENSPVAG00000015617	CHD9	81	73.806	ENSPFOG00000015839	chd9	63	68.417	Poecilia_formosa
ENSPVAG00000015617	CHD9	81	73.885	ENSPLAG00000011118	chd9	95	72.516	Poecilia_latipinna
ENSPVAG00000015617	CHD9	81	72.908	ENSPMEG00000015106	chd9	87	67.447	Poecilia_mexicana
ENSPVAG00000015617	CHD9	81	74.142	ENSPREG00000006473	chd9	87	68.515	Poecilia_reticulata
ENSPVAG00000015617	CHD9	98	93.691	ENSPPYG00000007348	CHD9	97	93.654	Pongo_abelii
ENSPVAG00000015617	CHD9	74	94.444	ENSPCAG00000007564	CHD9	82	94.444	Procavia_capensis
ENSPVAG00000015617	CHD9	95	99.296	ENSPCOG00000028433	CHD9	95	99.296	Propithecus_coquereli
ENSPVAG00000015617	CHD9	81	74.385	ENSPNYG00000010947	chd9	79	72.798	Pundamilia_nyererei
ENSPVAG00000015617	CHD9	77	74.121	ENSPNAG00000024141	chd9	95	72.918	Pygocentrus_nattereri
ENSPVAG00000015617	CHD9	87	85.659	ENSRNOG00000049302	Chd9	92	94.872	Rattus_norvegicus
ENSPVAG00000015617	CHD9	80	93.891	ENSRBIG00000035553	CHD9	90	100.000	Rhinopithecus_bieti
ENSPVAG00000015617	CHD9	80	93.803	ENSRROG00000033278	CHD9	90	100.000	Rhinopithecus_roxellana
ENSPVAG00000015617	CHD9	98	93.133	ENSSBOG00000030240	CHD9	97	92.603	Saimiri_boliviensis_boliviensis
ENSPVAG00000015617	CHD9	97	84.851	ENSSHAG00000002719	CHD9	97	85.014	Sarcophilus_harrisii
ENSPVAG00000015617	CHD9	95	59.758	ENSSFOG00015020209	chd9	95	74.123	Scleropages_formosus
ENSPVAG00000015617	CHD9	95	59.519	ENSSFOG00015001327	chd9	78	73.035	Scleropages_formosus
ENSPVAG00000015617	CHD9	81	73.089	ENSSMAG00000008953	chd9	91	71.495	Scophthalmus_maximus
ENSPVAG00000015617	CHD9	81	73.889	ENSSDUG00000006139	chd9	90	74.048	Seriola_dumerili
ENSPVAG00000015617	CHD9	90	73.583	ENSSLDG00000017818	chd9	90	74.048	Seriola_lalandi_dorsalis
ENSPVAG00000015617	CHD9	95	91.923	ENSSARG00000010632	CHD9	81	92.150	Sorex_araneus
ENSPVAG00000015617	CHD9	81	73.948	ENSSPAG00000021649	chd9	94	72.368	Stegastes_partitus
ENSPVAG00000015617	CHD9	84	92.857	ENSSSCG00000033591	CHD9	85	92.836	Sus_scrofa
ENSPVAG00000015617	CHD9	90	79.426	ENSTGUG00000007476	CHD9	97	84.197	Taeniopygia_guttata
ENSPVAG00000015617	CHD9	65	73.583	ENSTRUG00000009125	chd9	84	58.132	Takifugu_rubripes
ENSPVAG00000015617	CHD9	53	76.613	ENSTNIG00000003825	chd9	79	76.613	Tetraodon_nigroviridis
ENSPVAG00000015617	CHD9	65	94.595	ENSTBEG00000016052	-	81	94.595	Tupaia_belangeri
ENSPVAG00000015617	CHD9	87	91.634	ENSTTRG00000012674	CHD9	88	91.634	Tursiops_truncatus
ENSPVAG00000015617	CHD9	61	93.603	ENSUAMG00000022706	CHD9	90	100.000	Ursus_americanus
ENSPVAG00000015617	CHD9	87	94.935	ENSUMAG00000004043	CHD9	96	94.935	Ursus_maritimus
ENSPVAG00000015617	CHD9	94	95.010	ENSVPAG00000001374	CHD9	94	95.096	Vicugna_pacos
ENSPVAG00000015617	CHD9	98	95.296	ENSVVUG00000019435	CHD9	97	95.197	Vulpes_vulpes
ENSPVAG00000015617	CHD9	97	71.726	ENSXETG00000000349	chd9	93	71.894	Xenopus_tropicalis
ENSPVAG00000015617	CHD9	76	74.142	ENSXCOG00000012997	chd9	95	72.438	Xiphophorus_couchianus
ENSPVAG00000015617	CHD9	81	73.806	ENSXMAG00000016192	chd9	95	73.965	Xiphophorus_maculatus