EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000015753 (Gene tree)
Gene ID: -
Gene Symbol: CPSF6
Alias: CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 18803 bases
Position: chrscaffold_3250:94244-113046
Accession: 13871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000014859	RRM_1	PF00076.22	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000015753	CPSF6-201	1764	-	ENSPVAP00000014859	587 (aa)	-	UPI00018B2607

Gene Model

Click here to download ENSPVAG00000015753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000015753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000015753	CPSF6	61	55.670	ENSPVAG00000010675	CPSF7	71	56.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000015753	CPSF6	66	55.155	ENSG00000149532	CPSF7	98	54.913	Homo_sapiens
ENSPVAG00000015753	CPSF6	100	99.490	ENSG00000111605	CPSF6	100	99.490	Homo_sapiens
ENSPVAG00000015753	CPSF6	100	99.320	ENSAMEG00000011781	CPSF6	100	99.320	Ailuropoda_melanoleuca
ENSPVAG00000015753	CPSF6	61	39.899	ENSAOCG00000012357	CPSF7	73	42.169	Amphiprion_ocellaris
ENSPVAG00000015753	CPSF6	97	99.474	ENSANAG00000019240	CPSF6	99	99.474	Aotus_nancymaae
ENSPVAG00000015753	CPSF6	59	50.500	ENSANAG00000024635	CPSF7	69	50.556	Aotus_nancymaae
ENSPVAG00000015753	CPSF6	58	89.759	ENSAMXG00000016745	CPSF6	75	88.415	Astyanax_mexicanus
ENSPVAG00000015753	CPSF6	61	55.670	ENSBTAG00000015263	CPSF7	71	55.747	Bos_taurus
ENSPVAG00000015753	CPSF6	100	99.320	ENSBTAG00000007323	CPSF6	100	99.320	Bos_taurus
ENSPVAG00000015753	CPSF6	66	55.155	ENSCJAG00000019282	CPSF7	84	55.172	Callithrix_jacchus
ENSPVAG00000015753	CPSF6	100	99.321	ENSCJAG00000001798	CPSF6	100	99.336	Callithrix_jacchus
ENSPVAG00000015753	CPSF6	61	55.670	ENSCAFG00000016152	CPSF7	71	56.322	Canis_familiaris
ENSPVAG00000015753	CPSF6	97	99.473	ENSCAFG00000000424	CPSF6	100	99.473	Canis_familiaris
ENSPVAG00000015753	CPSF6	100	99.490	ENSCAFG00020016950	CPSF6	100	99.490	Canis_lupus_dingo
ENSPVAG00000015753	CPSF6	61	55.670	ENSCAFG00020012753	CPSF7	71	56.322	Canis_lupus_dingo
ENSPVAG00000015753	CPSF6	61	55.670	ENSCHIG00000014655	CPSF7	71	55.747	Capra_hircus
ENSPVAG00000015753	CPSF6	100	99.320	ENSCHIG00000010792	CPSF6	100	99.320	Capra_hircus
ENSPVAG00000015753	CPSF6	97	99.472	ENSTSYG00000008591	CPSF6	100	99.336	Carlito_syrichta
ENSPVAG00000015753	CPSF6	61	55.670	ENSTSYG00000010138	-	71	56.322	Carlito_syrichta
ENSPVAG00000015753	CPSF6	57	55.670	ENSCAPG00000006384	CPSF7	70	56.322	Cavia_aperea
ENSPVAG00000015753	CPSF6	61	55.670	ENSCPOG00000009980	CPSF7	71	56.322	Cavia_porcellus
ENSPVAG00000015753	CPSF6	100	99.150	ENSCPOG00000015201	CPSF6	100	99.150	Cavia_porcellus
ENSPVAG00000015753	CPSF6	61	55.155	ENSCCAG00000032367	CPSF7	71	55.747	Cebus_capucinus
ENSPVAG00000015753	CPSF6	100	99.321	ENSCCAG00000028149	CPSF6	100	99.321	Cebus_capucinus
ENSPVAG00000015753	CPSF6	66	55.155	ENSCATG00000042801	CPSF7	79	55.747	Cercocebus_atys
ENSPVAG00000015753	CPSF6	100	99.490	ENSCATG00000039288	CPSF6	100	99.490	Cercocebus_atys
ENSPVAG00000015753	CPSF6	97	99.120	ENSCLAG00000010149	CPSF6	100	99.120	Chinchilla_lanigera
ENSPVAG00000015753	CPSF6	61	55.670	ENSCLAG00000003174	CPSF7	71	55.747	Chinchilla_lanigera
ENSPVAG00000015753	CPSF6	66	55.155	ENSCSAG00000006414	CPSF7	79	55.747	Chlorocebus_sabaeus
ENSPVAG00000015753	CPSF6	100	99.490	ENSCSAG00000004232	CPSF6	100	99.490	Chlorocebus_sabaeus
ENSPVAG00000015753	CPSF6	97	99.472	ENSCANG00000037294	CPSF6	100	99.472	Colobus_angolensis_palliatus
ENSPVAG00000015753	CPSF6	61	56.186	ENSCGRG00001020382	Cpsf7	71	58.046	Cricetulus_griseus_chok1gshd
ENSPVAG00000015753	CPSF6	100	99.490	ENSCGRG00001018082	Cpsf6	100	99.490	Cricetulus_griseus_chok1gshd
ENSPVAG00000015753	CPSF6	97	99.472	ENSCGRG00000016909	Cpsf6	100	99.472	Cricetulus_griseus_crigri
ENSPVAG00000015753	CPSF6	69	54.630	ENSCGRG00000017954	Cpsf7	77	58.046	Cricetulus_griseus_crigri
ENSPVAG00000015753	CPSF6	66	36.036	ENSCVAG00000007392	CPSF7	51	44.521	Cyprinodon_variegatus
ENSPVAG00000015753	CPSF6	61	55.670	ENSDNOG00000018517	CPSF7	84	55.747	Dasypus_novemcinctus
ENSPVAG00000015753	CPSF6	97	99.472	ENSDORG00000002950	Cpsf6	100	99.472	Dipodomys_ordii
ENSPVAG00000015753	CPSF6	100	92.517	ENSETEG00000002097	CPSF6	100	92.517	Echinops_telfairi
ENSPVAG00000015753	CPSF6	84	54.872	ENSETEG00000003765	CPSF7	71	56.897	Echinops_telfairi
ENSPVAG00000015753	CPSF6	100	99.490	ENSEASG00005008066	CPSF6	100	99.490	Equus_asinus_asinus
ENSPVAG00000015753	CPSF6	61	55.670	ENSEASG00005008196	CPSF7	71	56.322	Equus_asinus_asinus
ENSPVAG00000015753	CPSF6	100	99.490	ENSECAG00000015988	CPSF6	100	99.490	Equus_caballus
ENSPVAG00000015753	CPSF6	63	53.591	ENSECAG00000018521	CPSF7	93	55.747	Equus_caballus
ENSPVAG00000015753	CPSF6	97	98.768	ENSEEUG00000015039	CPSF6	100	98.768	Erinaceus_europaeus
ENSPVAG00000015753	CPSF6	100	99.320	ENSFCAG00000002855	CPSF6	100	99.320	Felis_catus
ENSPVAG00000015753	CPSF6	68	53.591	ENSFCAG00000013677	CPSF7	93	55.747	Felis_catus
ENSPVAG00000015753	CPSF6	60	53.723	ENSFALG00000011927	CPSF7	76	56.140	Ficedula_albicollis
ENSPVAG00000015753	CPSF6	61	56.186	ENSFDAG00000003919	CPSF7	71	56.322	Fukomys_damarensis
ENSPVAG00000015753	CPSF6	97	98.427	ENSFDAG00000002281	CPSF6	97	98.427	Fukomys_damarensis
ENSPVAG00000015753	CPSF6	50	93.333	ENSGMOG00000012951	cpsf6	53	92.500	Gadus_morhua
ENSPVAG00000015753	CPSF6	58	55.000	ENSGALG00000040962	CPSF7	63	56.395	Gallus_gallus
ENSPVAG00000015753	CPSF6	100	99.321	ENSGGOG00000008211	CPSF6	100	99.321	Gorilla_gorilla
ENSPVAG00000015753	CPSF6	100	98.980	ENSHGLG00000000792	CPSF6	100	98.980	Heterocephalus_glaber_female
ENSPVAG00000015753	CPSF6	66	56.186	ENSHGLG00000019090	-	79	56.322	Heterocephalus_glaber_female
ENSPVAG00000015753	CPSF6	97	98.944	ENSHGLG00100013861	CPSF6	100	98.944	Heterocephalus_glaber_male
ENSPVAG00000015753	CPSF6	98	98.103	ENSSTOG00000014133	CPSF6	100	92.958	Ictidomys_tridecemlineatus
ENSPVAG00000015753	CPSF6	61	55.670	ENSSTOG00000007708	CPSF7	71	56.322	Ictidomys_tridecemlineatus
ENSPVAG00000015753	CPSF6	97	99.472	ENSJJAG00000014647	Cpsf6	100	99.472	Jaculus_jaculus
ENSPVAG00000015753	CPSF6	66	55.670	ENSJJAG00000019390	Cpsf7	79	56.322	Jaculus_jaculus
ENSPVAG00000015753	CPSF6	57	38.764	ENSLBEG00000000947	CPSF7	60	50.450	Labrus_bergylta
ENSPVAG00000015753	CPSF6	59	44.304	ENSLACG00000005542	CPSF7	70	44.304	Latimeria_chalumnae
ENSPVAG00000015753	CPSF6	88	56.186	ENSLAFG00000032084	CPSF7	71	56.897	Loxodonta_africana
ENSPVAG00000015753	CPSF6	69	93.970	ENSLAFG00000030413	CPSF6	100	93.197	Loxodonta_africana
ENSPVAG00000015753	CPSF6	100	99.321	ENSMFAG00000045318	CPSF6	100	99.321	Macaca_fascicularis
ENSPVAG00000015753	CPSF6	61	55.155	ENSMFAG00000001401	CPSF7	71	55.747	Macaca_fascicularis
ENSPVAG00000015753	CPSF6	100	99.321	ENSMMUG00000002921	CPSF6	100	99.321	Macaca_mulatta
ENSPVAG00000015753	CPSF6	66	55.155	ENSMMUG00000015280	CPSF7	79	55.747	Macaca_mulatta
ENSPVAG00000015753	CPSF6	100	99.321	ENSMNEG00000036311	CPSF6	100	99.333	Macaca_nemestrina
ENSPVAG00000015753	CPSF6	66	55.155	ENSMNEG00000029585	CPSF7	79	55.747	Macaca_nemestrina
ENSPVAG00000015753	CPSF6	61	55.155	ENSMLEG00000031269	CPSF7	69	55.747	Mandrillus_leucophaeus
ENSPVAG00000015753	CPSF6	97	99.472	ENSMLEG00000003957	CPSF6	100	99.472	Mandrillus_leucophaeus
ENSPVAG00000015753	CPSF6	96	41.796	ENSMGAG00000004876	CPSF7	62	61.310	Meleagris_gallopavo
ENSPVAG00000015753	CPSF6	61	55.670	ENSMAUG00000013020	Cpsf7	71	56.322	Mesocricetus_auratus
ENSPVAG00000015753	CPSF6	100	99.490	ENSMAUG00000013240	Cpsf6	100	99.490	Mesocricetus_auratus
ENSPVAG00000015753	CPSF6	61	55.670	ENSMICG00000013788	CPSF7	71	56.322	Microcebus_murinus
ENSPVAG00000015753	CPSF6	100	99.490	ENSMICG00000007385	-	100	99.490	Microcebus_murinus
ENSPVAG00000015753	CPSF6	100	99.490	ENSMOCG00000013982	Cpsf6	100	99.490	Microtus_ochrogaster
ENSPVAG00000015753	CPSF6	61	55.670	ENSMOCG00000000072	Cpsf7	71	56.322	Microtus_ochrogaster
ENSPVAG00000015753	CPSF6	70	89.119	ENSMALG00000014908	cpsf6	76	90.303	Monopterus_albus
ENSPVAG00000015753	CPSF6	61	55.670	MGP_CAROLIEiJ_G0022690	Cpsf7	71	56.322	Mus_caroli
ENSPVAG00000015753	CPSF6	100	99.490	MGP_CAROLIEiJ_G0015834	Cpsf6	100	99.490	Mus_caroli
ENSPVAG00000015753	CPSF6	100	99.150	ENSMUSG00000055531	Cpsf6	100	99.150	Mus_musculus
ENSPVAG00000015753	CPSF6	61	55.670	ENSMUSG00000034820	Cpsf7	71	56.322	Mus_musculus
ENSPVAG00000015753	CPSF6	61	55.670	MGP_PahariEiJ_G0014184	Cpsf7	71	56.322	Mus_pahari
ENSPVAG00000015753	CPSF6	86	99.377	MGP_PahariEiJ_G0031253	Cpsf6	95	90.844	Mus_pahari
ENSPVAG00000015753	CPSF6	61	55.670	MGP_SPRETEiJ_G0023604	Cpsf7	71	56.322	Mus_spretus
ENSPVAG00000015753	CPSF6	100	99.150	MGP_SPRETEiJ_G0016657	Cpsf6	100	99.150	Mus_spretus
ENSPVAG00000015753	CPSF6	57	54.639	ENSMPUG00000014163	CPSF7	66	55.172	Mustela_putorius_furo
ENSPVAG00000015753	CPSF6	66	55.670	ENSMLUG00000013278	CPSF7	79	56.322	Myotis_lucifugus
ENSPVAG00000015753	CPSF6	76	93.478	ENSMLUG00000028728	-	93	81.212	Myotis_lucifugus
ENSPVAG00000015753	CPSF6	68	84.153	ENSMLUG00000023960	-	81	83.256	Myotis_lucifugus
ENSPVAG00000015753	CPSF6	100	99.490	ENSNGAG00000015901	Cpsf6	100	99.490	Nannospalax_galili
ENSPVAG00000015753	CPSF6	61	55.670	ENSNGAG00000005031	Cpsf7	71	56.322	Nannospalax_galili
ENSPVAG00000015753	CPSF6	61	55.155	ENSNLEG00000002529	CPSF7	65	55.747	Nomascus_leucogenys
ENSPVAG00000015753	CPSF6	100	99.151	ENSNLEG00000003798	CPSF6	100	99.333	Nomascus_leucogenys
ENSPVAG00000015753	CPSF6	61	53.093	ENSMEUG00000002261	CPSF7	71	55.172	Notamacropus_eugenii
ENSPVAG00000015753	CPSF6	100	96.259	ENSMEUG00000015041	CPSF6	99	96.259	Notamacropus_eugenii
ENSPVAG00000015753	CPSF6	97	98.944	ENSOPRG00000005199	CPSF6	100	98.944	Ochotona_princeps
ENSPVAG00000015753	CPSF6	61	53.299	ENSODEG00000002610	CPSF7	71	55.932	Octodon_degus
ENSPVAG00000015753	CPSF6	74	77.483	ENSODEG00000007109	-	87	76.101	Octodon_degus
ENSPVAG00000015753	CPSF6	75	98.795	ENSODEG00000004418	-	88	98.400	Octodon_degus
ENSPVAG00000015753	CPSF6	100	99.490	ENSOCUG00000013505	CPSF6	100	99.490	Oryctolagus_cuniculus
ENSPVAG00000015753	CPSF6	72	49.767	ENSOCUG00000024726	CPSF7	71	55.747	Oryctolagus_cuniculus
ENSPVAG00000015753	CPSF6	59	37.629	ENSORLG00000006495	CPSF7	63	43.939	Oryzias_latipes
ENSPVAG00000015753	CPSF6	59	37.629	ENSORLG00020012657	CPSF7	66	41.667	Oryzias_latipes_hni
ENSPVAG00000015753	CPSF6	59	37.629	ENSORLG00015011091	CPSF7	63	43.939	Oryzias_latipes_hsok
ENSPVAG00000015753	CPSF6	69	37.981	ENSOMEG00000000539	CPSF7	68	37.647	Oryzias_melastigma
ENSPVAG00000015753	CPSF6	61	55.670	ENSOGAG00000027958	CPSF7	66	56.322	Otolemur_garnettii
ENSPVAG00000015753	CPSF6	61	55.670	ENSOARG00000012937	CPSF7	64	55.747	Ovis_aries
ENSPVAG00000015753	CPSF6	97	98.949	ENSOARG00000020532	CPSF6	100	99.254	Ovis_aries
ENSPVAG00000015753	CPSF6	61	55.155	ENSPPAG00000028232	CPSF7	70	55.747	Pan_paniscus
ENSPVAG00000015753	CPSF6	97	96.329	ENSPPAG00000005301	CPSF6	98	96.329	Pan_paniscus
ENSPVAG00000015753	CPSF6	100	99.320	ENSPPRG00000021620	CPSF6	100	99.320	Panthera_pardus
ENSPVAG00000015753	CPSF6	61	55.670	ENSPPRG00000008538	CPSF7	71	56.322	Panthera_pardus
ENSPVAG00000015753	CPSF6	61	55.670	ENSPTIG00000021699	CPSF7	71	56.322	Panthera_tigris_altaica
ENSPVAG00000015753	CPSF6	91	99.254	ENSPTIG00000004079	CPSF6	100	99.254	Panthera_tigris_altaica
ENSPVAG00000015753	CPSF6	61	55.155	ENSPTRG00000003742	CPSF7	71	55.747	Pan_troglodytes
ENSPVAG00000015753	CPSF6	100	99.321	ENSPTRG00000005205	CPSF6	100	99.321	Pan_troglodytes
ENSPVAG00000015753	CPSF6	61	55.155	ENSPANG00000006037	CPSF7	68	55.747	Papio_anubis
ENSPVAG00000015753	CPSF6	100	99.490	ENSPANG00000011641	CPSF6	100	99.490	Papio_anubis
ENSPVAG00000015753	CPSF6	57	47.159	ENSPKIG00000018054	CPSF7	72	47.500	Paramormyrops_kingsleyae
ENSPVAG00000015753	CPSF6	56	94.512	ENSPSIG00000016360	CPSF6	76	94.512	Pelodiscus_sinensis
ENSPVAG00000015753	CPSF6	97	99.296	ENSPEMG00000007973	Cpsf6	100	99.296	Peromyscus_maniculatus_bairdii
ENSPVAG00000015753	CPSF6	66	55.670	ENSPEMG00000012648	Cpsf7	79	56.322	Peromyscus_maniculatus_bairdii
ENSPVAG00000015753	CPSF6	100	98.810	ENSPCIG00000019063	CPSF6	100	98.810	Phascolarctos_cinereus
ENSPVAG00000015753	CPSF6	64	48.603	ENSPCIG00000002551	CPSF7	70	69.492	Phascolarctos_cinereus
ENSPVAG00000015753	CPSF6	55	73.457	ENSPMEG00000001353	cpsf6	54	70.312	Poecilia_mexicana
ENSPVAG00000015753	CPSF6	61	55.155	ENSPPYG00000003188	CPSF7	71	55.747	Pongo_abelii
ENSPVAG00000015753	CPSF6	100	99.490	ENSPCAG00000011574	CPSF6	100	99.490	Procavia_capensis
ENSPVAG00000015753	CPSF6	61	55.670	ENSPCOG00000011976	CPSF7	71	56.322	Propithecus_coquereli
ENSPVAG00000015753	CPSF6	100	99.151	ENSPCOG00000024384	CPSF6	100	99.151	Propithecus_coquereli
ENSPVAG00000015753	CPSF6	51	46.795	ENSPNAG00000015073	CPSF7	75	44.633	Pygocentrus_nattereri
ENSPVAG00000015753	CPSF6	66	55.155	ENSRNOG00000020668	Cpsf7	79	55.747	Rattus_norvegicus
ENSPVAG00000015753	CPSF6	66	55.155	ENSRBIG00000031429	CPSF7	93	55.172	Rhinopithecus_bieti
ENSPVAG00000015753	CPSF6	100	99.151	ENSRBIG00000042827	CPSF6	100	99.151	Rhinopithecus_bieti
ENSPVAG00000015753	CPSF6	61	55.155	ENSRROG00000045009	CPSF7	71	55.747	Rhinopithecus_roxellana
ENSPVAG00000015753	CPSF6	100	99.320	ENSRROG00000042758	CPSF6	100	99.320	Rhinopithecus_roxellana
ENSPVAG00000015753	CPSF6	61	55.155	ENSSBOG00000018431	CPSF7	71	55.747	Saimiri_boliviensis_boliviensis
ENSPVAG00000015753	CPSF6	97	98.951	ENSSBOG00000010652	CPSF6	100	99.440	Saimiri_boliviensis_boliviensis
ENSPVAG00000015753	CPSF6	69	41.667	ENSSFOG00015010288	cpsf7	78	40.000	Scleropages_formosus
ENSPVAG00000015753	CPSF6	100	92.007	ENSSARG00000006743	CPSF6	100	92.007	Sorex_araneus
ENSPVAG00000015753	CPSF6	61	56.250	ENSSPUG00000019344	CPSF7	73	56.977	Sphenodon_punctatus
ENSPVAG00000015753	CPSF6	61	55.670	ENSSSCG00000013083	CPSF7	84	55.747	Sus_scrofa
ENSPVAG00000015753	CPSF6	100	99.490	ENSSSCG00000038031	CPSF6	100	99.490	Sus_scrofa
ENSPVAG00000015753	CPSF6	58	51.397	ENSTGUG00000006513	CPSF7	71	56.647	Taeniopygia_guttata
ENSPVAG00000015753	CPSF6	61	55.670	ENSUAMG00000017809	CPSF7	71	56.322	Ursus_americanus
ENSPVAG00000015753	CPSF6	91	92.537	ENSUAMG00000023492	CPSF6	100	92.537	Ursus_americanus
ENSPVAG00000015753	CPSF6	91	99.440	ENSUMAG00000020779	CPSF6	100	99.440	Ursus_maritimus
ENSPVAG00000015753	CPSF6	66	55.670	ENSUMAG00000011825	CPSF7	79	56.322	Ursus_maritimus
ENSPVAG00000015753	CPSF6	97	99.472	ENSVPAG00000008469	CPSF6	100	99.472	Vicugna_pacos
ENSPVAG00000015753	CPSF6	91	99.440	ENSVVUG00000010156	-	100	99.440	Vulpes_vulpes
ENSPVAG00000015753	CPSF6	61	55.670	ENSVVUG00000004939	CPSF7	84	55.747	Vulpes_vulpes
ENSPVAG00000015753	CPSF6	97	40.172	ENSXETG00000006715	cpsf7	85	34.672	Xenopus_tropicalis