EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000016265 (Gene tree)
Gene ID: -
Gene Symbol: XRN1
Alias: SEP1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 108699 bases
Position: chrGeneScaffold_3182:114532-223230
Accession: 30654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000015349	XRN_N	PF03159.18	3.1e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000016269	XRN1-201	5115	-	ENSPVAP00000015349	1704 (aa)	-	UPI00018B4865

Gene Model

Click here to download ENSPVAG00000016265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000016265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000016265	XRN1	96	92.028	ENSG00000114127	XRN1	100	96.970	Homo_sapiens
ENSPVAG00000016265	XRN1	86	83.478	ENSAPOG00000000622	xrn1	93	68.803	Acanthochromis_polyacanthus
ENSPVAG00000016265	XRN1	96	92.913	ENSAMEG00000012538	XRN1	94	92.913	Ailuropoda_melanoleuca
ENSPVAG00000016265	XRN1	91	70.060	ENSACIG00000001057	xrn1	89	70.060	Amphilophus_citrinellus
ENSPVAG00000016265	XRN1	92	70.130	ENSAOCG00000014097	xrn1	80	84.426	Amphiprion_ocellaris
ENSPVAG00000016265	XRN1	87	70.390	ENSAPEG00000006620	xrn1	86	70.390	Amphiprion_percula
ENSPVAG00000016265	XRN1	88	69.775	ENSATEG00000009752	xrn1	90	69.775	Anabas_testudineus
ENSPVAG00000016265	XRN1	90	82.270	ENSAPLG00000004905	XRN1	87	82.270	Anas_platyrhynchos
ENSPVAG00000016265	XRN1	96	80.606	ENSACAG00000004985	XRN1	94	80.606	Anolis_carolinensis
ENSPVAG00000016265	XRN1	96	92.114	ENSANAG00000029013	XRN1	99	91.101	Aotus_nancymaae
ENSPVAG00000016265	XRN1	91	70.319	ENSACLG00000004806	xrn1	86	70.319	Astatotilapia_calliptera
ENSPVAG00000016265	XRN1	91	68.626	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSPVAG00000016265	XRN1	96	91.941	ENSBTAG00000011524	XRN1	96	91.941	Bos_taurus
ENSPVAG00000016265	XRN1	63	64.873	WBGene00012730	xrn-1	68	64.972	Caenorhabditis_elegans
ENSPVAG00000016265	XRN1	96	92.114	ENSCJAG00000001872	XRN1	96	92.114	Callithrix_jacchus
ENSPVAG00000016265	XRN1	96	91.854	ENSCAFG00000007783	XRN1	96	91.854	Canis_familiaris
ENSPVAG00000016265	XRN1	93	92.981	ENSCAFG00020009120	XRN1	99	97.289	Canis_lupus_dingo
ENSPVAG00000016265	XRN1	96	92.201	ENSCHIG00000019192	XRN1	94	92.201	Capra_hircus
ENSPVAG00000016265	XRN1	93	91.941	ENSTSYG00000002705	XRN1	94	91.941	Carlito_syrichta
ENSPVAG00000016265	XRN1	96	92.374	ENSCCAG00000034800	XRN1	99	95.482	Cebus_capucinus
ENSPVAG00000016265	XRN1	96	92.548	ENSCATG00000041794	XRN1	96	92.548	Cercocebus_atys
ENSPVAG00000016265	XRN1	96	90.555	ENSCLAG00000001451	XRN1	99	93.072	Chinchilla_lanigera
ENSPVAG00000016265	XRN1	96	92.721	ENSCSAG00000011265	XRN1	96	92.721	Chlorocebus_sabaeus
ENSPVAG00000016265	XRN1	56	100.000	ENSCHOG00000013961	-	56	98.701	Choloepus_hoffmanni
ENSPVAG00000016265	XRN1	63	72.965	ENSCSAVG00000008584	-	71	72.965	Ciona_savignyi
ENSPVAG00000016265	XRN1	96	92.634	ENSCANG00000037495	XRN1	99	96.687	Colobus_angolensis_palliatus
ENSPVAG00000016265	XRN1	96	90.381	ENSCGRG00001019411	Xrn1	99	93.373	Cricetulus_griseus_chok1gshd
ENSPVAG00000016265	XRN1	96	90.381	ENSCGRG00000012464	Xrn1	99	93.373	Cricetulus_griseus_crigri
ENSPVAG00000016265	XRN1	89	67.023	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSPVAG00000016265	XRN1	61	85.838	ENSCVAG00000013089	xrn1	99	69.462	Cyprinodon_variegatus
ENSPVAG00000016265	XRN1	96	71.737	ENSDARG00000091652	xrn1	98	71.730	Danio_rerio
ENSPVAG00000016265	XRN1	93	89.688	ENSDORG00000013833	Xrn1	93	89.688	Dipodomys_ordii
ENSPVAG00000016265	XRN1	67	40.804	FBgn0020261	pcm	69	40.697	Drosophila_melanogaster
ENSPVAG00000016265	XRN1	81	97.297	ENSETEG00000003978	XRN1	83	96.774	Echinops_telfairi
ENSPVAG00000016265	XRN1	96	92.288	ENSEASG00005002687	XRN1	99	96.386	Equus_asinus_asinus
ENSPVAG00000016265	XRN1	96	92.374	ENSECAG00000008301	XRN1	96	92.374	Equus_caballus
ENSPVAG00000016265	XRN1	80	78.916	ENSEEUG00000011323	XRN1	80	78.376	Erinaceus_europaeus
ENSPVAG00000016265	XRN1	91	71.082	ENSELUG00000000169	xrn1	85	71.082	Esox_lucius
ENSPVAG00000016265	XRN1	96	86.320	ENSFCAG00000027589	XRN1	99	86.154	Felis_catus
ENSPVAG00000016265	XRN1	91	82.654	ENSFALG00000007021	XRN1	87	82.654	Ficedula_albicollis
ENSPVAG00000016265	XRN1	93	90.468	ENSFDAG00000020494	XRN1	99	93.976	Fukomys_damarensis
ENSPVAG00000016265	XRN1	75	85.260	ENSGMOG00000006396	xrn1	76	66.432	Gadus_morhua
ENSPVAG00000016265	XRN1	88	82.756	ENSGALG00000002706	XRN1	85	82.756	Gallus_gallus
ENSPVAG00000016265	XRN1	87	84.971	ENSGACG00000014328	xrn1	82	84.971	Gasterosteus_aculeatus
ENSPVAG00000016265	XRN1	91	82.857	ENSGAGG00000017535	XRN1	95	82.857	Gopherus_agassizii
ENSPVAG00000016265	XRN1	96	91.941	ENSGGOG00000008047	XRN1	96	91.941	Gorilla_gorilla
ENSPVAG00000016265	XRN1	91	69.370	ENSHBUG00000005908	xrn1	98	65.361	Haplochromis_burtoni
ENSPVAG00000016265	XRN1	96	91.681	ENSHGLG00000014476	XRN1	99	94.578	Heterocephalus_glaber_female
ENSPVAG00000016265	XRN1	96	91.681	ENSHGLG00100015130	XRN1	99	94.578	Heterocephalus_glaber_male
ENSPVAG00000016265	XRN1	87	85.260	ENSHCOG00000014062	xrn1	93	69.741	Hippocampus_comes
ENSPVAG00000016265	XRN1	91	71.886	ENSIPUG00000015229	xrn1	87	71.886	Ictalurus_punctatus
ENSPVAG00000016265	XRN1	96	92.461	ENSSTOG00000013552	XRN1	99	95.783	Ictidomys_tridecemlineatus
ENSPVAG00000016265	XRN1	91	90.160	ENSJJAG00000010863	Xrn1	99	93.072	Jaculus_jaculus
ENSPVAG00000016265	XRN1	81	85.549	ENSKMAG00000021356	xrn1	85	85.260	Kryptolebias_marmoratus
ENSPVAG00000016265	XRN1	82	84.971	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSPVAG00000016265	XRN1	92	77.730	ENSLACG00000009020	XRN1	85	77.730	Latimeria_chalumnae
ENSPVAG00000016265	XRN1	96	73.838	ENSLOCG00000007944	xrn1	91	73.838	Lepisosteus_oculatus
ENSPVAG00000016265	XRN1	63	90.739	ENSLAFG00000015426	XRN1	100	90.739	Loxodonta_africana
ENSPVAG00000016265	XRN1	96	92.634	ENSMFAG00000032599	XRN1	96	92.634	Macaca_fascicularis
ENSPVAG00000016265	XRN1	96	92.548	ENSMMUG00000014038	XRN1	96	92.548	Macaca_mulatta
ENSPVAG00000016265	XRN1	96	92.461	ENSMNEG00000034217	XRN1	96	92.461	Macaca_nemestrina
ENSPVAG00000016265	XRN1	78	85.549	ENSMAMG00000013219	xrn1	94	69.628	Mastacembelus_armatus
ENSPVAG00000016265	XRN1	91	70.233	ENSMZEG00005015099	xrn1	86	70.233	Maylandia_zebra
ENSPVAG00000016265	XRN1	91	80.548	ENSMGAG00000006333	XRN1	93	80.548	Meleagris_gallopavo
ENSPVAG00000016265	XRN1	96	91.854	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSPVAG00000016265	XRN1	57	91.964	ENSMOCG00000008665	Xrn1	99	91.964	Microtus_ochrogaster
ENSPVAG00000016265	XRN1	96	85.615	ENSMODG00000021236	XRN1	96	85.615	Monodelphis_domestica
ENSPVAG00000016265	XRN1	86	84.393	ENSMALG00000004098	xrn1	87	67.070	Monopterus_albus
ENSPVAG00000016265	XRN1	92	92.936	MGP_CAROLIEiJ_G0032535	Xrn1	100	97.500	Mus_caroli
ENSPVAG00000016265	XRN1	96	89.775	ENSMUSG00000032410	Xrn1	100	97.500	Mus_musculus
ENSPVAG00000016265	XRN1	96	89.861	MGP_PahariEiJ_G0015404	Xrn1	100	97.500	Mus_pahari
ENSPVAG00000016265	XRN1	96	89.948	MGP_SPRETEiJ_G0033678	Xrn1	100	97.500	Mus_spretus
ENSPVAG00000016265	XRN1	96	92.975	ENSMPUG00000012040	XRN1	96	92.975	Mustela_putorius_furo
ENSPVAG00000016265	XRN1	93	91.421	ENSMLUG00000016885	XRN1	94	91.421	Myotis_lucifugus
ENSPVAG00000016265	XRN1	56	94.578	ENSNGAG00000023964	Xrn1	99	94.578	Nannospalax_galili
ENSPVAG00000016265	XRN1	96	92.461	ENSNLEG00000004726	XRN1	96	92.461	Nomascus_leucogenys
ENSPVAG00000016265	XRN1	61	98.969	ENSMEUG00000014473	-	62	99.029	Notamacropus_eugenii
ENSPVAG00000016265	XRN1	69	98.507	ENSOPRG00000007337	-	69	98.507	Ochotona_princeps
ENSPVAG00000016265	XRN1	87	85.549	ENSONIG00000016673	xrn1	88	70.639	Oreochromis_niloticus
ENSPVAG00000016265	XRN1	88	83.317	ENSOANG00000006735	XRN1	95	83.317	Ornithorhynchus_anatinus
ENSPVAG00000016265	XRN1	96	92.368	ENSOCUG00000001861	XRN1	96	92.368	Oryctolagus_cuniculus
ENSPVAG00000016265	XRN1	83	85.549	ENSORLG00000013005	xrn1	91	70.700	Oryzias_latipes
ENSPVAG00000016265	XRN1	82	85.549	ENSORLG00020005559	xrn1	91	71.046	Oryzias_latipes_hni
ENSPVAG00000016265	XRN1	82	84.971	ENSORLG00015022523	xrn1	83	70.873	Oryzias_latipes_hsok
ENSPVAG00000016265	XRN1	84	86.127	ENSOMEG00000015397	xrn1	91	70.736	Oryzias_melastigma
ENSPVAG00000016265	XRN1	96	89.168	ENSOGAG00000000170	XRN1	96	89.168	Otolemur_garnettii
ENSPVAG00000016265	XRN1	96	92.288	ENSOARG00000006343	XRN1	96	92.288	Ovis_aries
ENSPVAG00000016265	XRN1	96	92.114	ENSPPAG00000010180	XRN1	96	92.114	Pan_paniscus
ENSPVAG00000016265	XRN1	96	92.814	ENSPPRG00000007125	XRN1	94	92.814	Panthera_pardus
ENSPVAG00000016265	XRN1	96	92.900	ENSPTIG00000021081	XRN1	94	92.900	Panthera_tigris_altaica
ENSPVAG00000016265	XRN1	96	92.114	ENSPTRG00000015482	XRN1	96	92.114	Pan_troglodytes
ENSPVAG00000016265	XRN1	96	92.548	ENSPANG00000010638	XRN1	96	92.548	Papio_anubis
ENSPVAG00000016265	XRN1	96	82.642	ENSPSIG00000018050	XRN1	96	82.642	Pelodiscus_sinensis
ENSPVAG00000016265	XRN1	52	86.416	ENSPMGG00000002648	xrn1	98	72.799	Periophthalmus_magnuspinnatus
ENSPVAG00000016265	XRN1	56	92.771	ENSPEMG00000020610	Xrn1	99	92.771	Peromyscus_maniculatus_bairdii
ENSPVAG00000016265	XRN1	61	77.778	ENSPMAG00000002975	xrn1	89	77.778	Petromyzon_marinus
ENSPVAG00000016265	XRN1	96	85.529	ENSPCIG00000028735	XRN1	99	85.634	Phascolarctos_cinereus
ENSPVAG00000016265	XRN1	74	85.260	ENSPFOG00000013932	xrn1	92	69.880	Poecilia_formosa
ENSPVAG00000016265	XRN1	74	85.549	ENSPLAG00000021653	xrn1	86	70.354	Poecilia_latipinna
ENSPVAG00000016265	XRN1	74	85.260	ENSPMEG00000003076	xrn1	84	70.086	Poecilia_mexicana
ENSPVAG00000016265	XRN1	86	84.971	ENSPREG00000021147	xrn1	84	84.971	Poecilia_reticulata
ENSPVAG00000016265	XRN1	96	92.288	ENSPPYG00000014172	XRN1	96	92.288	Pongo_abelii
ENSPVAG00000016265	XRN1	85	84.629	ENSPCAG00000005638	XRN1	94	84.629	Procavia_capensis
ENSPVAG00000016265	XRN1	96	92.028	ENSPCOG00000013089	XRN1	99	96.084	Propithecus_coquereli
ENSPVAG00000016265	XRN1	86	84.393	ENSPNYG00000010570	xrn1	88	70.345	Pundamilia_nyererei
ENSPVAG00000016265	XRN1	91	68.421	ENSPNAG00000023531	xrn1	87	68.421	Pygocentrus_nattereri
ENSPVAG00000016265	XRN1	93	89.861	ENSRNOG00000042951	Xrn1	94	89.861	Rattus_norvegicus
ENSPVAG00000016265	XRN1	96	92.201	ENSRBIG00000041227	XRN1	96	92.201	Rhinopithecus_bieti
ENSPVAG00000016265	XRN1	64	55.814	YGL173C	XRN1	70	55.814	Saccharomyces_cerevisiae
ENSPVAG00000016265	XRN1	96	92.114	ENSSBOG00000029561	XRN1	96	92.114	Saimiri_boliviensis_boliviensis
ENSPVAG00000016265	XRN1	94	85.297	ENSSHAG00000016207	XRN1	96	85.297	Sarcophilus_harrisii
ENSPVAG00000016265	XRN1	84	86.416	ENSSFOG00015024211	xrn1	88	71.404	Scleropages_formosus
ENSPVAG00000016265	XRN1	91	70.553	ENSSMAG00000016534	xrn1	91	70.553	Scophthalmus_maximus
ENSPVAG00000016265	XRN1	79	70.035	ENSSDUG00000010306	xrn1	85	70.035	Seriola_dumerili
ENSPVAG00000016265	XRN1	87	68.739	ENSSLDG00000021543	xrn1	87	70.294	Seriola_lalandi_dorsalis
ENSPVAG00000016265	XRN1	63	79.938	ENSSARG00000007741	-	79	79.938	Sorex_araneus
ENSPVAG00000016265	XRN1	96	82.654	ENSTGUG00000008498	XRN1	96	82.654	Taeniopygia_guttata
ENSPVAG00000016265	XRN1	74	84.682	ENSTRUG00000004895	xrn1	96	67.308	Takifugu_rubripes
ENSPVAG00000016265	XRN1	83	84.150	ENSTNIG00000017615	xrn1	88	67.181	Tetraodon_nigroviridis
ENSPVAG00000016265	XRN1	79	95.942	ENSTBEG00000003256	XRN1	78	96.774	Tupaia_belangeri
ENSPVAG00000016265	XRN1	92	89.592	ENSTTRG00000012914	XRN1	92	89.592	Tursiops_truncatus
ENSPVAG00000016265	XRN1	96	90.641	ENSUAMG00000001608	XRN1	99	97.289	Ursus_americanus
ENSPVAG00000016265	XRN1	96	93.241	ENSUMAG00000013625	XRN1	96	93.241	Ursus_maritimus
ENSPVAG00000016265	XRN1	96	87.771	ENSVPAG00000004690	XRN1	96	87.771	Vicugna_pacos
ENSPVAG00000016265	XRN1	96	93.154	ENSVVUG00000024461	XRN1	99	97.289	Vulpes_vulpes
ENSPVAG00000016265	XRN1	96	76.797	ENSXETG00000000619	xrn1	90	88.439	Xenopus_tropicalis
ENSPVAG00000016265	XRN1	86	85.549	ENSXCOG00000007917	xrn1	86	69.957	Xiphophorus_couchianus
ENSPVAG00000016265	XRN1	80	85.549	ENSXMAG00000018320	xrn1	86	69.862	Xiphophorus_maculatus