EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000016344 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 19919 bases
Position: chrGeneScaffold_2550:279308-299226
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000015426	ResIII	PF04851.15	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000016347	CHD3-201	5898	-	ENSPVAP00000015426	1965 (aa)	-	UPI00018B49CB

Gene Model

Click here to download ENSPVAG00000016344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000016344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000016344	CHD3	78	71.908	ENSPVAG00000012574	-	80	71.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000016344	CHD3	87	98.021	ENSG00000170004	CHD3	99	97.727	Homo_sapiens
ENSPVAG00000016344	CHD3	67	86.385	ENSAPOG00000005614	chd3	78	86.385	Acanthochromis_polyacanthus
ENSPVAG00000016344	CHD3	56	99.775	ENSAMEG00000003025	-	81	99.775	Ailuropoda_melanoleuca
ENSPVAG00000016344	CHD3	68	88.372	ENSACIG00000019671	chd3	83	88.372	Amphilophus_citrinellus
ENSPVAG00000016344	CHD3	67	85.915	ENSAOCG00000023784	chd3	81	85.915	Amphiprion_ocellaris
ENSPVAG00000016344	CHD3	63	79.461	ENSAPEG00000006341	chd3	79	75.102	Amphiprion_percula
ENSPVAG00000016344	CHD3	82	75.257	ENSATEG00000000848	chd3	83	70.887	Anabas_testudineus
ENSPVAG00000016344	CHD3	82	87.087	ENSACAG00000004276	CHD3	83	82.621	Anolis_carolinensis
ENSPVAG00000016344	CHD3	87	97.565	ENSANAG00000034323	CHD3	87	98.796	Aotus_nancymaae
ENSPVAG00000016344	CHD3	75	83.182	ENSACLG00000009222	chd3	82	73.029	Astatotilapia_calliptera
ENSPVAG00000016344	CHD3	87	97.416	ENSBTAG00000014377	CHD3	84	97.415	Bos_taurus
ENSPVAG00000016344	CHD3	87	97.412	ENSCJAG00000014766	CHD3	85	97.412	Callithrix_jacchus
ENSPVAG00000016344	CHD3	87	97.565	ENSCAFG00000016859	CHD3	85	97.565	Canis_familiaris
ENSPVAG00000016344	CHD3	82	98.125	ENSCAFG00020007422	CHD3	86	98.362	Canis_lupus_dingo
ENSPVAG00000016344	CHD3	87	97.565	ENSCHIG00000016737	CHD3	86	97.565	Capra_hircus
ENSPVAG00000016344	CHD3	87	97.108	ENSTSYG00000035658	CHD3	85	97.108	Carlito_syrichta
ENSPVAG00000016344	CHD3	87	96.651	ENSCAPG00000014864	CHD3	86	96.651	Cavia_aperea
ENSPVAG00000016344	CHD3	87	96.499	ENSCPOG00000022653	CHD3	85	96.499	Cavia_porcellus
ENSPVAG00000016344	CHD3	87	96.956	ENSCCAG00000034792	CHD3	85	96.956	Cebus_capucinus
ENSPVAG00000016344	CHD3	87	97.412	ENSCATG00000041717	CHD3	85	97.412	Cercocebus_atys
ENSPVAG00000016344	CHD3	87	96.499	ENSCLAG00000010523	CHD3	87	96.499	Chinchilla_lanigera
ENSPVAG00000016344	CHD3	87	97.565	ENSCSAG00000011122	CHD3	87	97.565	Chlorocebus_sabaeus
ENSPVAG00000016344	CHD3	73	88.319	ENSCPBG00000011966	CHD3	90	85.462	Chrysemys_picta_bellii
ENSPVAG00000016344	CHD3	87	97.260	ENSCANG00000037641	CHD3	86	98.796	Colobus_angolensis_palliatus
ENSPVAG00000016344	CHD3	87	94.977	ENSCGRG00001011306	Chd3	87	94.977	Cricetulus_griseus_chok1gshd
ENSPVAG00000016344	CHD3	81	98.005	ENSCGRG00000007878	Chd3	85	98.005	Cricetulus_griseus_crigri
ENSPVAG00000016344	CHD3	68	90.826	ENSCSEG00000004489	chd3	82	83.491	Cynoglossus_semilaevis
ENSPVAG00000016344	CHD3	72	82.470	ENSCVAG00000007293	chd3	83	74.592	Cyprinodon_variegatus
ENSPVAG00000016344	CHD3	76	84.681	ENSDARG00000021405	chd3	82	75.704	Danio_rerio
ENSPVAG00000016344	CHD3	87	88.485	ENSDNOG00000047846	CHD3	85	88.485	Dasypus_novemcinctus
ENSPVAG00000016344	CHD3	87	94.977	ENSDORG00000010713	Chd3	87	94.977	Dipodomys_ordii
ENSPVAG00000016344	CHD3	85	96.434	ENSETEG00000017733	CHD3	86	96.434	Echinops_telfairi
ENSPVAG00000016344	CHD3	63	74.917	ENSEBUG00000008310	chd3	83	74.875	Eptatretus_burgeri
ENSPVAG00000016344	CHD3	80	98.799	ENSEASG00005019360	CHD3	86	98.799	Equus_asinus_asinus
ENSPVAG00000016344	CHD3	80	98.799	ENSECAG00000010051	CHD3	86	98.799	Equus_caballus
ENSPVAG00000016344	CHD3	80	94.915	ENSEEUG00000015205	CHD3	79	94.915	Erinaceus_europaeus
ENSPVAG00000016344	CHD3	65	90.476	ENSELUG00000019499	chd3	83	90.476	Esox_lucius
ENSPVAG00000016344	CHD3	87	96.956	ENSFCAG00000009629	CHD3	83	96.956	Felis_catus
ENSPVAG00000016344	CHD3	87	96.804	ENSFDAG00000008220	CHD3	85	96.804	Fukomys_damarensis
ENSPVAG00000016344	CHD3	72	82.075	ENSGMOG00000013599	chd3	74	82.075	Gadus_morhua
ENSPVAG00000016344	CHD3	82	69.459	ENSGACG00000019275	chd3	83	69.746	Gasterosteus_aculeatus
ENSPVAG00000016344	CHD3	63	89.925	ENSGAGG00000013164	CHD3	80	88.930	Gopherus_agassizii
ENSPVAG00000016344	CHD3	87	97.869	ENSGGOG00000013496	CHD3	86	98.687	Gorilla_gorilla
ENSPVAG00000016344	CHD3	87	97.108	ENSHGLG00000012017	CHD3	86	97.108	Heterocephalus_glaber_female
ENSPVAG00000016344	CHD3	87	90.715	ENSHGLG00100013902	CHD3	96	90.715	Heterocephalus_glaber_male
ENSPVAG00000016344	CHD3	78	73.523	ENSHCOG00000010170	chd3	78	73.679	Hippocampus_comes
ENSPVAG00000016344	CHD3	71	86.161	ENSIPUG00000003271	chd3	79	78.656	Ictalurus_punctatus
ENSPVAG00000016344	CHD3	87	96.804	ENSSTOG00000025907	CHD3	87	96.804	Ictidomys_tridecemlineatus
ENSPVAG00000016344	CHD3	87	95.586	ENSJJAG00000017633	Chd3	87	95.586	Jaculus_jaculus
ENSPVAG00000016344	CHD3	70	90.047	ENSKMAG00000019292	chd3	83	73.045	Kryptolebias_marmoratus
ENSPVAG00000016344	CHD3	81	70.672	ENSLBEG00000028485	chd3	79	70.905	Labrus_bergylta
ENSPVAG00000016344	CHD3	84	76.414	ENSLACG00000008031	CHD3	79	79.492	Latimeria_chalumnae
ENSPVAG00000016344	CHD3	82	79.751	ENSLOCG00000013965	chd3	84	75.862	Lepisosteus_oculatus
ENSPVAG00000016344	CHD3	83	97.217	ENSLAFG00000000572	CHD3	86	97.217	Loxodonta_africana
ENSPVAG00000016344	CHD3	87	97.412	ENSMFAG00000020113	CHD3	85	98.906	Macaca_fascicularis
ENSPVAG00000016344	CHD3	87	94.952	ENSMMUG00000022221	CHD3	85	94.952	Macaca_mulatta
ENSPVAG00000016344	CHD3	87	97.260	ENSMNEG00000001728	CHD3	86	98.796	Macaca_nemestrina
ENSPVAG00000016344	CHD3	87	97.412	ENSMLEG00000032249	CHD3	85	97.412	Mandrillus_leucophaeus
ENSPVAG00000016344	CHD3	73	76.253	ENSMAMG00000000564	chd3	83	76.196	Mastacembelus_armatus
ENSPVAG00000016344	CHD3	87	94.825	ENSMAUG00000013873	Chd3	86	97.033	Mesocricetus_auratus
ENSPVAG00000016344	CHD3	87	97.108	ENSMICG00000008741	CHD3	85	96.960	Microcebus_murinus
ENSPVAG00000016344	CHD3	87	95.434	ENSMOCG00000004848	Chd3	87	95.434	Microtus_ochrogaster
ENSPVAG00000016344	CHD3	80	73.113	ENSMMOG00000012699	chd3	83	72.906	Mola_mola
ENSPVAG00000016344	CHD3	80	94.760	ENSMODG00000007509	CHD3	85	95.306	Monodelphis_domestica
ENSPVAG00000016344	CHD3	87	94.234	MGP_CAROLIEiJ_G0016564	Chd3	86	93.672	Mus_caroli
ENSPVAG00000016344	CHD3	87	94.841	ENSMUSG00000018474	Chd3	86	93.480	Mus_musculus
ENSPVAG00000016344	CHD3	87	95.144	MGP_PahariEiJ_G0017695	Chd3	86	93.570	Mus_pahari
ENSPVAG00000016344	CHD3	87	94.841	MGP_SPRETEiJ_G0017400	Chd3	86	93.576	Mus_spretus
ENSPVAG00000016344	CHD3	74	98.241	ENSMPUG00000008861	CHD3	85	98.241	Mustela_putorius_furo
ENSPVAG00000016344	CHD3	87	96.353	ENSMLUG00000014643	-	85	96.353	Myotis_lucifugus
ENSPVAG00000016344	CHD3	87	95.282	ENSNGAG00000000773	Chd3	85	95.282	Nannospalax_galili
ENSPVAG00000016344	CHD3	73	73.889	ENSNBRG00000000636	chd3	82	73.838	Neolamprologus_brichardi
ENSPVAG00000016344	CHD3	86	94.571	ENSNLEG00000009770	CHD3	87	94.952	Nomascus_leucogenys
ENSPVAG00000016344	CHD3	70	99.363	ENSMEUG00000005852	CHD3	74	99.363	Notamacropus_eugenii
ENSPVAG00000016344	CHD3	82	98.640	ENSOPRG00000011069	CHD3	86	98.640	Ochotona_princeps
ENSPVAG00000016344	CHD3	87	96.043	ENSODEG00000017785	CHD3	86	96.043	Octodon_degus
ENSPVAG00000016344	CHD3	64	79.461	ENSONIG00000009292	chd3	82	75.051	Oreochromis_niloticus
ENSPVAG00000016344	CHD3	86	92.042	ENSOCUG00000029299	CHD3	87	92.042	Oryctolagus_cuniculus
ENSPVAG00000016344	CHD3	68	70.918	ENSORLG00000007107	chd3	75	70.672	Oryzias_latipes
ENSPVAG00000016344	CHD3	58	85.909	ENSOMEG00000013691	chd3	83	75.705	Oryzias_melastigma
ENSPVAG00000016344	CHD3	87	96.956	ENSOGAG00000003216	CHD3	87	96.956	Otolemur_garnettii
ENSPVAG00000016344	CHD3	87	95.758	ENSOARG00000017855	CHD3	85	95.758	Ovis_aries
ENSPVAG00000016344	CHD3	87	94.190	ENSPPAG00000032886	CHD3	86	98.031	Pan_paniscus
ENSPVAG00000016344	CHD3	87	97.412	ENSPPRG00000000626	CHD3	85	97.412	Panthera_pardus
ENSPVAG00000016344	CHD3	87	98.174	ENSPTRG00000008714	CHD3	86	98.906	Pan_troglodytes
ENSPVAG00000016344	CHD3	87	97.412	ENSPANG00000023938	CHD3	85	98.796	Papio_anubis
ENSPVAG00000016344	CHD3	79	89.373	ENSPKIG00000006305	chd3	82	89.373	Paramormyrops_kingsleyae
ENSPVAG00000016344	CHD3	87	94.825	ENSPEMG00000014262	Chd3	86	94.825	Peromyscus_maniculatus_bairdii
ENSPVAG00000016344	CHD3	87	96.804	ENSPCIG00000005442	CHD3	84	96.804	Phascolarctos_cinereus
ENSPVAG00000016344	CHD3	80	74.794	ENSPFOG00000012464	chd3	75	75.412	Poecilia_formosa
ENSPVAG00000016344	CHD3	72	83.401	ENSPLAG00000002887	chd3	78	83.401	Poecilia_latipinna
ENSPVAG00000016344	CHD3	74	86.364	ENSPREG00000011044	chd3	82	80.894	Poecilia_reticulata
ENSPVAG00000016344	CHD3	82	96.054	ENSPPYG00000007940	CHD3	82	96.054	Pongo_abelii
ENSPVAG00000016344	CHD3	83	99.775	ENSPCAG00000004350	CHD3	83	99.775	Procavia_capensis
ENSPVAG00000016344	CHD3	87	97.260	ENSPCOG00000020952	CHD3	86	97.112	Propithecus_coquereli
ENSPVAG00000016344	CHD3	76	78.455	ENSPNAG00000020393	chd3	83	78.455	Pygocentrus_nattereri
ENSPVAG00000016344	CHD3	80	95.965	ENSRNOG00000009722	Chd3	86	96.292	Rattus_norvegicus
ENSPVAG00000016344	CHD3	87	92.794	ENSRBIG00000033562	CHD3	86	95.311	Rhinopithecus_bieti
ENSPVAG00000016344	CHD3	87	94.857	ENSRROG00000029554	CHD3	86	98.796	Rhinopithecus_roxellana
ENSPVAG00000016344	CHD3	87	97.565	ENSSBOG00000020719	CHD3	86	98.906	Saimiri_boliviensis_boliviensis
ENSPVAG00000016344	CHD3	86	91.747	ENSSHAG00000014412	CHD3	86	91.843	Sarcophilus_harrisii
ENSPVAG00000016344	CHD3	75	85.135	ENSSFOG00015023123	chd3	82	72.231	Scleropages_formosus
ENSPVAG00000016344	CHD3	66	91.358	ENSSMAG00000006451	chd3	86	74.066	Scophthalmus_maximus
ENSPVAG00000016344	CHD3	67	80.412	ENSSPAG00000013694	chd3	81	80.412	Stegastes_partitus
ENSPVAG00000016344	CHD3	87	96.505	ENSSSCG00000021363	CHD3	86	98.472	Sus_scrofa
ENSPVAG00000016344	CHD3	60	82.432	ENSTRUG00000014990	chd3	70	82.432	Takifugu_rubripes
ENSPVAG00000016344	CHD3	82	73.286	ENSTNIG00000012998	chd3	81	73.388	Tetraodon_nigroviridis
ENSPVAG00000016344	CHD3	59	100.000	ENSTBEG00000011454	-	65	100.000	Tupaia_belangeri
ENSPVAG00000016344	CHD3	86	98.790	ENSTTRG00000010295	CHD3	83	98.790	Tursiops_truncatus
ENSPVAG00000016344	CHD3	80	98.037	ENSUAMG00000005475	CHD3	86	98.037	Ursus_americanus
ENSPVAG00000016344	CHD3	51	100.000	ENSVPAG00000010794	-	58	100.000	Vicugna_pacos
ENSPVAG00000016344	CHD3	83	97.743	ENSVVUG00000028011	CHD3	85	98.125	Vulpes_vulpes
ENSPVAG00000016344	CHD3	82	77.396	ENSXETG00000012991	chd3	78	77.396	Xenopus_tropicalis
ENSPVAG00000016344	CHD3	66	86.127	ENSXMAG00000016035	chd3	82	86.385	Xiphophorus_maculatus