EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000016403 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrGeneScaffold_3160:41392-44127
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000015478	RNA_ligase	PF09414.10	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000016402	LIG4-201	2736	-	ENSPVAP00000015478	911 (aa)	-	UPI00018B25AC

Gene Model

Click here to download ENSPVAG00000016403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000016403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000016403	LIG4	100	90.889	ENSG00000174405	LIG4	100	90.889	Homo_sapiens
ENSPVAG00000016403	LIG4	99	64.145	ENSAPOG00000000866	lig4	99	64.576	Acanthochromis_polyacanthus
ENSPVAG00000016403	LIG4	100	88.804	ENSAMEG00000019685	LIG4	99	88.804	Ailuropoda_melanoleuca
ENSPVAG00000016403	LIG4	99	64.790	ENSACIG00000018309	lig4	99	65.227	Amphilophus_citrinellus
ENSPVAG00000016403	LIG4	99	64.466	ENSAOCG00000011768	lig4	99	64.686	Amphiprion_ocellaris
ENSPVAG00000016403	LIG4	99	64.576	ENSAPEG00000017815	lig4	99	64.796	Amphiprion_percula
ENSPVAG00000016403	LIG4	99	64.725	ENSATEG00000005583	lig4	99	64.835	Anabas_testudineus
ENSPVAG00000016403	LIG4	97	73.409	ENSAPLG00000001673	LIG4	99	73.409	Anas_platyrhynchos
ENSPVAG00000016403	LIG4	99	74.339	ENSACAG00000014566	LIG4	99	74.339	Anolis_carolinensis
ENSPVAG00000016403	LIG4	100	89.572	ENSANAG00000012446	LIG4	100	89.572	Aotus_nancymaae
ENSPVAG00000016403	LIG4	99	64.349	ENSACLG00000027051	lig4	99	64.673	Astatotilapia_calliptera
ENSPVAG00000016403	LIG4	99	63.867	ENSAMXG00000008192	lig4	93	63.867	Astyanax_mexicanus
ENSPVAG00000016403	LIG4	100	88.804	ENSBTAG00000015868	LIG4	100	88.804	Bos_taurus
ENSPVAG00000016403	LIG4	100	89.133	ENSCJAG00000014689	LIG4	100	89.133	Callithrix_jacchus
ENSPVAG00000016403	LIG4	100	90.121	ENSCAFG00000006031	LIG4	100	90.121	Canis_familiaris
ENSPVAG00000016403	LIG4	100	90.121	ENSCAFG00020021230	LIG4	100	90.121	Canis_lupus_dingo
ENSPVAG00000016403	LIG4	100	88.364	ENSCHIG00000001019	LIG4	100	88.364	Capra_hircus
ENSPVAG00000016403	LIG4	99	87.486	ENSCAPG00000006284	LIG4	99	87.486	Cavia_aperea
ENSPVAG00000016403	LIG4	100	87.377	ENSCPOG00000014266	LIG4	100	87.377	Cavia_porcellus
ENSPVAG00000016403	LIG4	100	88.913	ENSCCAG00000019971	LIG4	100	88.913	Cebus_capucinus
ENSPVAG00000016403	LIG4	100	90.450	ENSCATG00000021075	LIG4	100	90.450	Cercocebus_atys
ENSPVAG00000016403	LIG4	100	88.255	ENSCLAG00000003376	LIG4	100	88.255	Chinchilla_lanigera
ENSPVAG00000016403	LIG4	100	90.889	ENSCSAG00000000211	LIG4	100	90.889	Chlorocebus_sabaeus
ENSPVAG00000016403	LIG4	99	77.594	ENSCPBG00000023291	LIG4	100	77.124	Chrysemys_picta_bellii
ENSPVAG00000016403	LIG4	68	45.310	ENSCING00000009536	-	95	45.310	Ciona_intestinalis
ENSPVAG00000016403	LIG4	83	45.072	ENSCSAVG00000010336	-	98	45.072	Ciona_savignyi
ENSPVAG00000016403	LIG4	100	90.340	ENSCANG00000005805	LIG4	100	90.340	Colobus_angolensis_palliatus
ENSPVAG00000016403	LIG4	100	85.307	ENSCGRG00001012072	Lig4	100	85.307	Cricetulus_griseus_chok1gshd
ENSPVAG00000016403	LIG4	100	85.307	ENSCGRG00000013417	Lig4	100	85.307	Cricetulus_griseus_crigri
ENSPVAG00000016403	LIG4	97	65.000	ENSCSEG00000013905	lig4	95	65.000	Cynoglossus_semilaevis
ENSPVAG00000016403	LIG4	99	65.495	ENSCVAG00000007896	lig4	99	65.495	Cyprinodon_variegatus
ENSPVAG00000016403	LIG4	99	63.234	ENSDARG00000060620	lig4	98	63.234	Danio_rerio
ENSPVAG00000016403	LIG4	100	88.487	ENSDNOG00000000513	LIG4	100	88.487	Dasypus_novemcinctus
ENSPVAG00000016403	LIG4	100	86.608	ENSDORG00000027303	Lig4	100	86.608	Dipodomys_ordii
ENSPVAG00000016403	LIG4	89	31.315	FBgn0030506	Lig4	91	31.315	Drosophila_melanogaster
ENSPVAG00000016403	LIG4	99	85.144	ENSETEG00000015563	LIG4	100	85.477	Echinops_telfairi
ENSPVAG00000016403	LIG4	99	43.354	ENSEBUG00000014243	lig4	99	43.354	Eptatretus_burgeri
ENSPVAG00000016403	LIG4	100	90.779	ENSEASG00005022073	LIG4	100	90.779	Equus_asinus_asinus
ENSPVAG00000016403	LIG4	100	90.011	ENSECAG00000003257	LIG4	100	90.011	Equus_caballus
ENSPVAG00000016403	LIG4	99	66.262	ENSELUG00000006787	lig4	99	66.373	Esox_lucius
ENSPVAG00000016403	LIG4	100	89.682	ENSFCAG00000031985	LIG4	100	89.682	Felis_catus
ENSPVAG00000016403	LIG4	89	74.293	ENSFALG00000004214	LIG4	98	74.293	Ficedula_albicollis
ENSPVAG00000016403	LIG4	100	88.145	ENSFDAG00000008973	LIG4	100	88.145	Fukomys_damarensis
ENSPVAG00000016403	LIG4	99	64.452	ENSFHEG00000007398	lig4	89	64.452	Fundulus_heteroclitus
ENSPVAG00000016403	LIG4	85	63.543	ENSGMOG00000012843	lig4	99	63.543	Gadus_morhua
ENSPVAG00000016403	LIG4	100	73.581	ENSGALG00000016854	LIG4	100	73.581	Gallus_gallus
ENSPVAG00000016403	LIG4	99	64.588	ENSGAFG00000019779	lig4	95	64.615	Gambusia_affinis
ENSPVAG00000016403	LIG4	99	62.791	ENSGACG00000014135	lig4	99	62.791	Gasterosteus_aculeatus
ENSPVAG00000016403	LIG4	100	90.779	ENSGGOG00000027771	LIG4	100	90.779	Gorilla_gorilla
ENSPVAG00000016403	LIG4	99	64.128	ENSHBUG00000006245	lig4	99	64.452	Haplochromis_burtoni
ENSPVAG00000016403	LIG4	100	88.145	ENSHGLG00000000718	LIG4	100	88.145	Heterocephalus_glaber_female
ENSPVAG00000016403	LIG4	100	88.145	ENSHGLG00100003265	LIG4	100	88.145	Heterocephalus_glaber_male
ENSPVAG00000016403	LIG4	99	63.407	ENSHCOG00000012010	lig4	99	63.626	Hippocampus_comes
ENSPVAG00000016403	LIG4	100	64.558	ENSIPUG00000013748	lig4	100	64.558	Ictalurus_punctatus
ENSPVAG00000016403	LIG4	100	88.035	ENSSTOG00000024303	LIG4	100	88.035	Ictidomys_tridecemlineatus
ENSPVAG00000016403	LIG4	100	86.389	ENSJJAG00000006750	Lig4	100	86.389	Jaculus_jaculus
ENSPVAG00000016403	LIG4	99	64.673	ENSKMAG00000001149	lig4	99	64.673	Kryptolebias_marmoratus
ENSPVAG00000016403	LIG4	91	64.790	ENSLBEG00000014578	lig4	100	65.264	Labrus_bergylta
ENSPVAG00000016403	LIG4	99	71.903	ENSLACG00000003282	LIG4	99	71.903	Latimeria_chalumnae
ENSPVAG00000016403	LIG4	99	70.220	ENSLOCG00000008901	lig4	98	70.220	Lepisosteus_oculatus
ENSPVAG00000016403	LIG4	100	86.528	ENSLAFG00000031152	LIG4	100	86.528	Loxodonta_africana
ENSPVAG00000016403	LIG4	100	90.670	ENSMFAG00000037235	LIG4	100	90.670	Macaca_fascicularis
ENSPVAG00000016403	LIG4	100	90.670	ENSMMUG00000008874	LIG4	100	90.670	Macaca_mulatta
ENSPVAG00000016403	LIG4	100	90.670	ENSMNEG00000023575	LIG4	100	90.670	Macaca_nemestrina
ENSPVAG00000016403	LIG4	100	90.560	ENSMLEG00000026720	LIG4	100	90.560	Mandrillus_leucophaeus
ENSPVAG00000016403	LIG4	99	64.841	ENSMAMG00000008472	lig4	99	65.275	Mastacembelus_armatus
ENSPVAG00000016403	LIG4	99	64.349	ENSMZEG00005001855	lig4	99	64.673	Maylandia_zebra
ENSPVAG00000016403	LIG4	100	73.799	ENSMGAG00000015532	LIG4	100	73.799	Meleagris_gallopavo
ENSPVAG00000016403	LIG4	100	83.425	ENSMOCG00000019000	Lig4	100	83.425	Microtus_ochrogaster
ENSPVAG00000016403	LIG4	99	64.230	ENSMMOG00000004390	lig4	99	64.230	Mola_mola
ENSPVAG00000016403	LIG4	100	82.437	ENSMODG00000025064	LIG4	100	82.895	Monodelphis_domestica
ENSPVAG00000016403	LIG4	99	64.784	ENSMALG00000008555	lig4	99	64.784	Monopterus_albus
ENSPVAG00000016403	LIG4	100	86.169	MGP_CAROLIEiJ_G0030809	Lig4	100	86.169	Mus_caroli
ENSPVAG00000016403	LIG4	100	85.840	ENSMUSG00000049717	Lig4	100	85.840	Mus_musculus
ENSPVAG00000016403	LIG4	100	85.840	MGP_PahariEiJ_G0021270	Lig4	100	85.840	Mus_pahari
ENSPVAG00000016403	LIG4	100	85.950	MGP_SPRETEiJ_G0031917	Lig4	100	85.950	Mus_spretus
ENSPVAG00000016403	LIG4	100	88.474	ENSMPUG00000018675	LIG4	100	88.474	Mustela_putorius_furo
ENSPVAG00000016403	LIG4	100	91.328	ENSMLUG00000001267	LIG4	100	91.328	Myotis_lucifugus
ENSPVAG00000016403	LIG4	100	86.059	ENSNGAG00000013258	Lig4	100	86.059	Nannospalax_galili
ENSPVAG00000016403	LIG4	99	64.294	ENSNBRG00000021252	lig4	99	64.615	Neolamprologus_brichardi
ENSPVAG00000016403	LIG4	100	90.340	ENSNLEG00000007888	LIG4	100	90.340	Nomascus_leucogenys
ENSPVAG00000016403	LIG4	100	87.157	ENSOPRG00000005765	LIG4	100	87.157	Ochotona_princeps
ENSPVAG00000016403	LIG4	100	86.059	ENSODEG00000019683	LIG4	100	86.059	Octodon_degus
ENSPVAG00000016403	LIG4	99	64.459	ENSONIG00000011969	lig4	97	64.784	Oreochromis_niloticus
ENSPVAG00000016403	LIG4	100	88.584	ENSOCUG00000015734	LIG4	100	88.584	Oryctolagus_cuniculus
ENSPVAG00000016403	LIG4	99	63.407	ENSORLG00000004041	lig4	99	63.407	Oryzias_latipes
ENSPVAG00000016403	LIG4	99	63.846	ENSORLG00020019607	lig4	99	63.846	Oryzias_latipes_hni
ENSPVAG00000016403	LIG4	99	63.516	ENSORLG00015017754	lig4	99	63.516	Oryzias_latipes_hsok
ENSPVAG00000016403	LIG4	75	68.824	ENSOMEG00000003459	lig4	99	68.824	Oryzias_melastigma
ENSPVAG00000016403	LIG4	100	89.364	ENSOGAG00000032120	LIG4	99	89.364	Otolemur_garnettii
ENSPVAG00000016403	LIG4	82	90.336	ENSOARG00000005590	LIG4	98	90.336	Ovis_aries
ENSPVAG00000016403	LIG4	100	90.450	ENSPPAG00000032998	LIG4	100	90.450	Pan_paniscus
ENSPVAG00000016403	LIG4	100	89.901	ENSPPRG00000017804	LIG4	100	89.901	Panthera_pardus
ENSPVAG00000016403	LIG4	100	89.901	ENSPTIG00000010051	LIG4	100	89.901	Panthera_tigris_altaica
ENSPVAG00000016403	LIG4	100	90.560	ENSPTRG00000006025	LIG4	100	90.560	Pan_troglodytes
ENSPVAG00000016403	LIG4	100	90.560	ENSPANG00000007562	LIG4	100	90.560	Papio_anubis
ENSPVAG00000016403	LIG4	99	65.385	ENSPKIG00000011645	lig4	98	65.385	Paramormyrops_kingsleyae
ENSPVAG00000016403	LIG4	100	76.856	ENSPSIG00000001504	LIG4	100	76.856	Pelodiscus_sinensis
ENSPVAG00000016403	LIG4	99	62.333	ENSPMGG00000013486	lig4	99	61.910	Periophthalmus_magnuspinnatus
ENSPVAG00000016403	LIG4	100	84.759	ENSPEMG00000000076	Lig4	100	84.759	Peromyscus_maniculatus_bairdii
ENSPVAG00000016403	LIG4	100	83.443	ENSPCIG00000021882	LIG4	100	83.443	Phascolarctos_cinereus
ENSPVAG00000016403	LIG4	99	64.850	ENSPFOG00000000797	lig4	99	64.615	Poecilia_formosa
ENSPVAG00000016403	LIG4	99	64.739	ENSPLAG00000001196	lig4	99	64.505	Poecilia_latipinna
ENSPVAG00000016403	LIG4	99	64.850	ENSPMEG00000021353	lig4	99	64.725	Poecilia_mexicana
ENSPVAG00000016403	LIG4	99	64.739	ENSPREG00000007323	lig4	99	64.544	Poecilia_reticulata
ENSPVAG00000016403	LIG4	100	90.560	ENSPPYG00000005540	LIG4	100	90.560	Pongo_abelii
ENSPVAG00000016403	LIG4	99	64.238	ENSPNYG00000009660	lig4	99	64.563	Pundamilia_nyererei
ENSPVAG00000016403	LIG4	100	63.706	ENSPNAG00000028069	LIG4	100	63.925	Pygocentrus_nattereri
ENSPVAG00000016403	LIG4	100	63.706	ENSPNAG00000028056	lig4	100	63.925	Pygocentrus_nattereri
ENSPVAG00000016403	LIG4	100	84.303	ENSRNOG00000014605	Lig4	100	84.303	Rattus_norvegicus
ENSPVAG00000016403	LIG4	100	89.023	ENSRBIG00000039962	LIG4	100	89.023	Rhinopithecus_bieti
ENSPVAG00000016403	LIG4	100	90.121	ENSRROG00000006040	LIG4	100	90.121	Rhinopithecus_roxellana
ENSPVAG00000016403	LIG4	100	89.243	ENSSBOG00000019029	LIG4	100	89.243	Saimiri_boliviensis_boliviensis
ENSPVAG00000016403	LIG4	100	79.802	ENSSHAG00000009525	LIG4	100	80.373	Sarcophilus_harrisii
ENSPVAG00000016403	LIG4	100	64.738	ENSSFOG00015012835	lig4	100	64.738	Scleropages_formosus
ENSPVAG00000016403	LIG4	99	62.237	ENSSMAG00000011267	lig4	99	62.237	Scophthalmus_maximus
ENSPVAG00000016403	LIG4	99	65.410	ENSSDUG00000010343	lig4	98	65.410	Seriola_dumerili
ENSPVAG00000016403	LIG4	99	63.677	ENSSLDG00000003239	lig4	99	63.677	Seriola_lalandi_dorsalis
ENSPVAG00000016403	LIG4	100	82.495	ENSSARG00000006573	LIG4	100	82.495	Sorex_araneus
ENSPVAG00000016403	LIG4	93	76.422	ENSSPUG00000002444	LIG4	100	76.422	Sphenodon_punctatus
ENSPVAG00000016403	LIG4	99	64.725	ENSSPAG00000001609	lig4	99	64.725	Stegastes_partitus
ENSPVAG00000016403	LIG4	100	86.498	ENSSSCG00000009540	LIG4	100	86.498	Sus_scrofa
ENSPVAG00000016403	LIG4	99	73.297	ENSTGUG00000010795	LIG4	100	73.297	Taeniopygia_guttata
ENSPVAG00000016403	LIG4	99	64.505	ENSTRUG00000009984	lig4	99	64.505	Takifugu_rubripes
ENSPVAG00000016403	LIG4	99	64.120	ENSTNIG00000010348	lig4	99	64.341	Tetraodon_nigroviridis
ENSPVAG00000016403	LIG4	100	89.462	ENSTBEG00000017741	LIG4	100	89.462	Tupaia_belangeri
ENSPVAG00000016403	LIG4	100	88.694	ENSTTRG00000012660	LIG4	100	88.694	Tursiops_truncatus
ENSPVAG00000016403	LIG4	100	88.694	ENSUAMG00000003773	LIG4	100	88.694	Ursus_americanus
ENSPVAG00000016403	LIG4	99	71.696	ENSXETG00000002654	lig4	99	71.696	Xenopus_tropicalis
ENSPVAG00000016403	LIG4	99	64.627	ENSXCOG00000017401	lig4	99	64.176	Xiphophorus_couchianus
ENSPVAG00000016403	LIG4	99	65.000	ENSXMAG00000015142	lig4	99	64.544	Xiphophorus_maculatus