EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000016938 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 12551 bases
Position: chrGeneScaffold_296:44088-56638
Accession: 105297858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000015978	KH_1	PF00013.29	1.7e-07	1	1
ENSPVAP00000015978	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000016938	SF1-201	1998	-	ENSPVAP00000015978	665 (aa)	XP_011367053	UPI00018B1531

Gene Model

Click here to download ENSPVAG00000016938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000016938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000016938	SF1	75	70.000	ENSAPOG00000012341	sf1	61	76.402	Acanthochromis_polyacanthus
ENSPVAG00000016938	SF1	79	97.909	ENSAMEG00000017828	SF1	82	97.909	Ailuropoda_melanoleuca
ENSPVAG00000016938	SF1	75	69.685	ENSAOCG00000010934	sf1	59	77.751	Amphiprion_ocellaris
ENSPVAG00000016938	SF1	75	69.685	ENSAPEG00000009498	sf1	59	77.751	Amphiprion_percula
ENSPVAG00000016938	SF1	92	90.328	ENSANAG00000026664	-	94	98.992	Aotus_nancymaae
ENSPVAG00000016938	SF1	78	87.016	ENSANAG00000022607	-	88	88.219	Aotus_nancymaae
ENSPVAG00000016938	SF1	75	69.461	ENSACLG00000007633	sf1	62	77.778	Astatotilapia_calliptera
ENSPVAG00000016938	SF1	75	71.598	ENSAMXG00000003630	sf1	51	79.036	Astyanax_mexicanus
ENSPVAG00000016938	SF1	79	97.909	ENSBTAG00000001035	SF1	82	97.909	Bos_taurus
ENSPVAG00000016938	SF1	100	96.434	ENSCJAG00000002780	SF1	100	96.434	Callithrix_jacchus
ENSPVAG00000016938	SF1	79	97.909	ENSCAFG00000014239	SF1	82	97.909	Canis_familiaris
ENSPVAG00000016938	SF1	79	97.909	ENSCAFG00020014381	SF1	82	97.909	Canis_lupus_dingo
ENSPVAG00000016938	SF1	81	99.442	ENSCHIG00000025867	SF1	98	99.442	Capra_hircus
ENSPVAG00000016938	SF1	66	98.182	ENSCAPG00000010762	SF1	79	98.182	Cavia_aperea
ENSPVAG00000016938	SF1	81	99.255	ENSCPOG00000012290	SF1	100	99.255	Cavia_porcellus
ENSPVAG00000016938	SF1	78	84.333	ENSCCAG00000023781	-	88	87.168	Cebus_capucinus
ENSPVAG00000016938	SF1	100	96.285	ENSCCAG00000037881	SF1	100	96.285	Cebus_capucinus
ENSPVAG00000016938	SF1	79	97.909	ENSCATG00000011564	SF1	95	98.526	Cercocebus_atys
ENSPVAG00000016938	SF1	81	99.442	ENSCSAG00000007258	SF1	98	99.442	Chlorocebus_sabaeus
ENSPVAG00000016938	SF1	82	83.640	ENSCHOG00000006008	SF1	94	83.789	Choloepus_hoffmanni
ENSPVAG00000016938	SF1	78	86.756	ENSCPBG00000023763	SF1	67	85.277	Chrysemys_picta_bellii
ENSPVAG00000016938	SF1	57	58.115	ENSCING00000005564	-	74	60.638	Ciona_intestinalis
ENSPVAG00000016938	SF1	77	53.448	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSPVAG00000016938	SF1	79	97.909	ENSCANG00000042201	SF1	88	99.187	Colobus_angolensis_palliatus
ENSPVAG00000016938	SF1	79	97.338	ENSCGRG00001003677	Sf1	82	97.338	Cricetulus_griseus_chok1gshd
ENSPVAG00000016938	SF1	81	98.696	ENSCGRG00000001708	Sf1	99	98.696	Cricetulus_griseus_crigri
ENSPVAG00000016938	SF1	75	70.495	ENSCVAG00000001670	sf1	63	78.922	Cyprinodon_variegatus
ENSPVAG00000016938	SF1	77	68.077	ENSDARG00000008188	sf1	70	78.043	Danio_rerio
ENSPVAG00000016938	SF1	81	100.000	ENSDNOG00000001282	SF1	98	100.000	Dasypus_novemcinctus
ENSPVAG00000016938	SF1	79	97.909	ENSDORG00000016334	Sf1	82	97.909	Dipodomys_ordii
ENSPVAG00000016938	SF1	79	90.286	ENSETEG00000012830	SF1	73	90.286	Echinops_telfairi
ENSPVAG00000016938	SF1	81	99.071	ENSEASG00005018272	SF1	98	99.071	Equus_asinus_asinus
ENSPVAG00000016938	SF1	81	99.257	ENSECAG00000024544	SF1	98	99.257	Equus_caballus
ENSPVAG00000016938	SF1	59	99.746	ENSEEUG00000001058	SF1	100	99.746	Erinaceus_europaeus
ENSPVAG00000016938	SF1	75	68.651	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSPVAG00000016938	SF1	100	97.313	ENSFCAG00000012231	SF1	100	97.313	Felis_catus
ENSPVAG00000016938	SF1	78	96.318	ENSFDAG00000009833	SF1	79	98.409	Fukomys_damarensis
ENSPVAG00000016938	SF1	75	69.685	ENSFHEG00000022656	sf1	60	76.690	Fundulus_heteroclitus
ENSPVAG00000016938	SF1	75	70.553	ENSGAFG00000019284	sf1	78	79.759	Gambusia_affinis
ENSPVAG00000016938	SF1	56	80.000	ENSGACG00000000826	sf1	66	76.156	Gasterosteus_aculeatus
ENSPVAG00000016938	SF1	69	88.889	ENSGAGG00000021691	SF1	73	85.277	Gopherus_agassizii
ENSPVAG00000016938	SF1	75	69.034	ENSHBUG00000011598	sf1	61	76.256	Haplochromis_burtoni
ENSPVAG00000016938	SF1	79	97.909	ENSHGLG00000009541	SF1	82	97.909	Heterocephalus_glaber_female
ENSPVAG00000016938	SF1	65	88.736	ENSHGLG00100008076	-	87	86.574	Heterocephalus_glaber_male
ENSPVAG00000016938	SF1	68	86.266	ENSHGLG00100008255	-	92	85.837	Heterocephalus_glaber_male
ENSPVAG00000016938	SF1	74	96.545	ENSHGLG00100013879	-	93	94.129	Heterocephalus_glaber_male
ENSPVAG00000016938	SF1	76	69.396	ENSHCOG00000011388	sf1	60	76.722	Hippocampus_comes
ENSPVAG00000016938	SF1	79	97.905	ENSSTOG00000009790	-	84	97.905	Ictidomys_tridecemlineatus
ENSPVAG00000016938	SF1	79	87.595	ENSSTOG00000024353	-	78	87.595	Ictidomys_tridecemlineatus
ENSPVAG00000016938	SF1	79	97.719	ENSJJAG00000011788	Sf1	82	97.719	Jaculus_jaculus
ENSPVAG00000016938	SF1	75	70.175	ENSKMAG00000005854	sf1	63	76.869	Kryptolebias_marmoratus
ENSPVAG00000016938	SF1	95	54.624	ENSLBEG00000019836	sf1	50	86.890	Labrus_bergylta
ENSPVAG00000016938	SF1	62	79.277	ENSLACG00000018493	SF1	74	78.744	Latimeria_chalumnae
ENSPVAG00000016938	SF1	75	74.651	ENSLOCG00000002130	sf1	59	80.196	Lepisosteus_oculatus
ENSPVAG00000016938	SF1	79	97.719	ENSLAFG00000007201	SF1	82	97.719	Loxodonta_africana
ENSPVAG00000016938	SF1	79	97.909	ENSMFAG00000033122	SF1	94	98.526	Macaca_fascicularis
ENSPVAG00000016938	SF1	81	99.442	ENSMMUG00000022606	SF1	99	98.768	Macaca_mulatta
ENSPVAG00000016938	SF1	83	97.297	ENSMNEG00000037901	SF1	94	98.526	Macaca_nemestrina
ENSPVAG00000016938	SF1	79	97.727	ENSMLEG00000040706	SF1	94	98.526	Mandrillus_leucophaeus
ENSPVAG00000016938	SF1	75	68.836	ENSMZEG00005009196	sf1	61	76.027	Maylandia_zebra
ENSPVAG00000016938	SF1	79	97.338	ENSMAUG00000014064	Sf1	82	97.338	Mesocricetus_auratus
ENSPVAG00000016938	SF1	92	93.109	ENSMICG00000001202	SF1	100	95.414	Microcebus_murinus
ENSPVAG00000016938	SF1	79	97.148	ENSMOCG00000022038	Sf1	82	97.148	Microtus_ochrogaster
ENSPVAG00000016938	SF1	75	68.136	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSPVAG00000016938	SF1	67	94.619	ENSMODG00000029407	SF1	96	94.619	Monodelphis_domestica
ENSPVAG00000016938	SF1	55	83.784	ENSMALG00000020521	sf1	68	76.611	Monopterus_albus
ENSPVAG00000016938	SF1	81	98.885	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSPVAG00000016938	SF1	81	98.885	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSPVAG00000016938	SF1	81	98.885	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSPVAG00000016938	SF1	81	98.885	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSPVAG00000016938	SF1	79	98.099	ENSMPUG00000012684	SF1	82	98.099	Mustela_putorius_furo
ENSPVAG00000016938	SF1	81	89.591	ENSMLUG00000029800	-	76	94.820	Myotis_lucifugus
ENSPVAG00000016938	SF1	79	97.909	ENSMLUG00000015217	-	82	97.909	Myotis_lucifugus
ENSPVAG00000016938	SF1	79	97.719	ENSNGAG00000005550	Sf1	82	97.719	Nannospalax_galili
ENSPVAG00000016938	SF1	75	69.461	ENSNBRG00000017606	sf1	61	78.155	Neolamprologus_brichardi
ENSPVAG00000016938	SF1	79	97.909	ENSNLEG00000005236	-	88	99.187	Nomascus_leucogenys
ENSPVAG00000016938	SF1	80	98.305	ENSMEUG00000013424	SF1	100	98.305	Notamacropus_eugenii
ENSPVAG00000016938	SF1	74	99.394	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSPVAG00000016938	SF1	69	96.937	ENSODEG00000006102	-	79	89.017	Octodon_degus
ENSPVAG00000016938	SF1	75	69.034	ENSONIG00000015728	sf1	61	76.256	Oreochromis_niloticus
ENSPVAG00000016938	SF1	61	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSPVAG00000016938	SF1	79	97.909	ENSOCUG00000026486	SF1	83	97.909	Oryctolagus_cuniculus
ENSPVAG00000016938	SF1	77	68.654	ENSORLG00000011853	sf1	58	77.458	Oryzias_latipes
ENSPVAG00000016938	SF1	77	68.593	ENSORLG00020011834	sf1	59	76.415	Oryzias_latipes_hni
ENSPVAG00000016938	SF1	75	68.039	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSPVAG00000016938	SF1	79	97.909	ENSOGAG00000016196	SF1	83	97.909	Otolemur_garnettii
ENSPVAG00000016938	SF1	78	94.659	ENSOARG00000009166	SF1	95	94.659	Ovis_aries
ENSPVAG00000016938	SF1	77	98.039	ENSPPAG00000002799	-	95	99.244	Pan_paniscus
ENSPVAG00000016938	SF1	88	98.797	ENSPPRG00000013566	SF1	86	98.797	Panthera_pardus
ENSPVAG00000016938	SF1	66	98.413	ENSPTIG00000016141	SF1	79	98.413	Panthera_tigris_altaica
ENSPVAG00000016938	SF1	100	95.704	ENSPTRG00000003846	SF1	97	99.279	Pan_troglodytes
ENSPVAG00000016938	SF1	81	99.442	ENSPANG00000020754	SF1	98	99.442	Papio_anubis
ENSPVAG00000016938	SF1	53	87.464	ENSPSIG00000003610	SF1	81	81.687	Pelodiscus_sinensis
ENSPVAG00000016938	SF1	79	97.338	ENSPEMG00000010463	Sf1	82	97.338	Peromyscus_maniculatus_bairdii
ENSPVAG00000016938	SF1	79	97.154	ENSPCIG00000018173	SF1	83	97.154	Phascolarctos_cinereus
ENSPVAG00000016938	SF1	75	70.891	ENSPFOG00000013683	sf1	66	80.929	Poecilia_formosa
ENSPVAG00000016938	SF1	62	78.333	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSPVAG00000016938	SF1	75	71.146	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSPVAG00000016938	SF1	75	70.495	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSPVAG00000016938	SF1	78	99.420	ENSPPYG00000003098	-	98	99.420	Pongo_abelii
ENSPVAG00000016938	SF1	91	94.156	ENSPCAG00000013631	SF1	100	93.027	Procavia_capensis
ENSPVAG00000016938	SF1	79	97.909	ENSPCOG00000027546	SF1	94	98.995	Propithecus_coquereli
ENSPVAG00000016938	SF1	75	68.775	ENSPNYG00000004673	sf1	59	76.869	Pundamilia_nyererei
ENSPVAG00000016938	SF1	79	97.338	ENSRNOG00000021085	Sf1	94	98.936	Rattus_norvegicus
ENSPVAG00000016938	SF1	80	94.249	ENSRBIG00000042818	SF1	89	98.925	Rhinopithecus_bieti
ENSPVAG00000016938	SF1	78	99.617	ENSRROG00000045655	SF1	100	99.617	Rhinopithecus_roxellana
ENSPVAG00000016938	SF1	62	37.587	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSPVAG00000016938	SF1	78	78.337	ENSSBOG00000022267	-	97	81.034	Saimiri_boliviensis_boliviensis
ENSPVAG00000016938	SF1	60	93.766	ENSSHAG00000006841	SF1	73	95.012	Sarcophilus_harrisii
ENSPVAG00000016938	SF1	78	69.582	ENSSFOG00015021978	sf1	56	76.905	Scleropages_formosus
ENSPVAG00000016938	SF1	81	66.727	ENSSMAG00000007549	sf1	63	76.471	Scophthalmus_maximus
ENSPVAG00000016938	SF1	75	69.548	ENSSDUG00000003903	sf1	61	77.033	Seriola_dumerili
ENSPVAG00000016938	SF1	75	69.548	ENSSLDG00000013075	sf1	59	77.240	Seriola_lalandi_dorsalis
ENSPVAG00000016938	SF1	78	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSPVAG00000016938	SF1	75	83.109	ENSSPUG00000012907	SF1	86	81.574	Sphenodon_punctatus
ENSPVAG00000016938	SF1	75	69.488	ENSSPAG00000019060	sf1	58	75.650	Stegastes_partitus
ENSPVAG00000016938	SF1	81	99.628	ENSSSCG00000013021	SF1	98	99.628	Sus_scrofa
ENSPVAG00000016938	SF1	79	61.351	ENSTNIG00000004820	sf1	78	69.544	Tetraodon_nigroviridis
ENSPVAG00000016938	SF1	69	91.739	ENSTBEG00000013133	SF1	67	91.703	Tupaia_belangeri
ENSPVAG00000016938	SF1	81	95.158	ENSTTRG00000008857	SF1	100	95.158	Tursiops_truncatus
ENSPVAG00000016938	SF1	62	95.411	ENSUAMG00000011977	SF1	79	95.411	Ursus_americanus
ENSPVAG00000016938	SF1	69	99.345	ENSUMAG00000007268	SF1	88	99.344	Ursus_maritimus
ENSPVAG00000016938	SF1	54	99.203	ENSVPAG00000011912	SF1	66	99.203	Vicugna_pacos
ENSPVAG00000016938	SF1	81	99.442	ENSVVUG00000028585	SF1	98	99.442	Vulpes_vulpes
ENSPVAG00000016938	SF1	70	75.264	ENSXETG00000008434	sf1	68	81.509	Xenopus_tropicalis
ENSPVAG00000016938	SF1	55	85.205	ENSXCOG00000003704	sf1	75	80.788	Xiphophorus_couchianus