EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017013 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 8066 bases
Position: chrGeneScaffold_1325:211712-219777
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016049	LSM	PF01423.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017015	SNRPB-201	852	-	ENSPVAP00000016049	283 (aa)	-	UPI00018B3280

Gene Model

Click here to download ENSPVAG00000017013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017013	SNRPB	80	98.678	ENSG00000125835	SNRPB	98	98.678	Homo_sapiens
ENSPVAG00000017013	SNRPB	63	91.713	ENSAPOG00000019606	snrpb	56	93.452	Acanthochromis_polyacanthus
ENSPVAG00000017013	SNRPB	99	95.439	ENSAMEG00000011353	SNRPB	99	95.439	Ailuropoda_melanoleuca
ENSPVAG00000017013	SNRPB	61	90.857	ENSACIG00000014480	snrpb	71	93.210	Amphilophus_citrinellus
ENSPVAG00000017013	SNRPB	63	91.713	ENSAOCG00000006876	snrpb	69	93.452	Amphiprion_ocellaris
ENSPVAG00000017013	SNRPB	63	91.713	ENSAPEG00000021585	snrpb	71	93.452	Amphiprion_percula
ENSPVAG00000017013	SNRPB	63	91.160	ENSATEG00000009836	snrpb	69	92.857	Anabas_testudineus
ENSPVAG00000017013	SNRPB	75	94.366	ENSACAG00000002053	SNRPB	92	94.366	Anolis_carolinensis
ENSPVAG00000017013	SNRPB	80	98.678	ENSANAG00000024443	-	98	98.678	Aotus_nancymaae
ENSPVAG00000017013	SNRPB	75	92.558	ENSANAG00000036271	-	76	92.063	Aotus_nancymaae
ENSPVAG00000017013	SNRPB	63	91.713	ENSACLG00000014707	snrpb	69	93.452	Astatotilapia_calliptera
ENSPVAG00000017013	SNRPB	77	91.855	ENSAMXG00000029434	snrpb	92	91.403	Astyanax_mexicanus
ENSPVAG00000017013	SNRPB	80	98.238	ENSBTAG00000001038	SNRPB	98	98.238	Bos_taurus
ENSPVAG00000017013	SNRPB	80	98.678	ENSCJAG00000020971	-	98	98.678	Callithrix_jacchus
ENSPVAG00000017013	SNRPB	75	91.121	ENSCJAG00000023097	-	79	91.005	Callithrix_jacchus
ENSPVAG00000017013	SNRPB	66	87.368	ENSCAFG00000031109	-	79	83.684	Canis_familiaris
ENSPVAG00000017013	SNRPB	80	98.678	ENSCAFG00000006693	-	98	98.678	Canis_familiaris
ENSPVAG00000017013	SNRPB	80	98.678	ENSCAFG00020016981	-	95	98.678	Canis_lupus_dingo
ENSPVAG00000017013	SNRPB	80	98.238	ENSCHIG00000025449	-	98	98.238	Capra_hircus
ENSPVAG00000017013	SNRPB	83	73.617	ENSTSYG00000032303	-	67	67.021	Carlito_syrichta
ENSPVAG00000017013	SNRPB	80	98.678	ENSTSYG00000014498	-	98	98.678	Carlito_syrichta
ENSPVAG00000017013	SNRPB	79	98.673	ENSCAPG00000012669	SNRPB	98	98.673	Cavia_aperea
ENSPVAG00000017013	SNRPB	80	98.678	ENSCPOG00000039408	SNRPB	98	98.678	Cavia_porcellus
ENSPVAG00000017013	SNRPB	80	98.678	ENSCCAG00000026002	SNRPB	98	98.678	Cebus_capucinus
ENSPVAG00000017013	SNRPB	99	64.437	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSPVAG00000017013	SNRPB	80	98.678	ENSCATG00000030230	SNRPB	98	98.678	Cercocebus_atys
ENSPVAG00000017013	SNRPB	79	99.115	ENSCLAG00000012442	SNRPB	95	99.115	Chinchilla_lanigera
ENSPVAG00000017013	SNRPB	80	98.678	ENSCSAG00000010840	SNRPB	98	98.678	Chlorocebus_sabaeus
ENSPVAG00000017013	SNRPB	77	95.475	ENSCPBG00000026801	SNRPB	96	95.475	Chrysemys_picta_bellii
ENSPVAG00000017013	SNRPB	80	98.678	ENSCANG00000019461	SNRPB	98	98.678	Colobus_angolensis_palliatus
ENSPVAG00000017013	SNRPB	80	98.678	ENSCGRG00001023046	Snrpb	98	98.678	Cricetulus_griseus_chok1gshd
ENSPVAG00000017013	SNRPB	77	98.630	ENSCGRG00000010423	Snrpb	97	98.630	Cricetulus_griseus_crigri
ENSPVAG00000017013	SNRPB	64	91.257	ENSCSEG00000020328	snrpb	70	94.048	Cynoglossus_semilaevis
ENSPVAG00000017013	SNRPB	60	91.908	ENSDARG00000011125	snrpb	72	91.329	Danio_rerio
ENSPVAG00000017013	SNRPB	80	98.678	ENSDNOG00000015545	-	95	98.678	Dasypus_novemcinctus
ENSPVAG00000017013	SNRPB	60	93.064	ENSDNOG00000007896	-	71	93.064	Dasypus_novemcinctus
ENSPVAG00000017013	SNRPB	77	98.190	ENSDORG00000029558	Snrpb	96	98.190	Dipodomys_ordii
ENSPVAG00000017013	SNRPB	52	69.128	FBgn0262601	SmB	74	69.128	Drosophila_melanogaster
ENSPVAG00000017013	SNRPB	77	81.448	ENSETEG00000006830	SNRPB	97	81.448	Echinops_telfairi
ENSPVAG00000017013	SNRPB	63	79.032	ENSEBUG00000007467	SNRPB	62	87.248	Eptatretus_burgeri
ENSPVAG00000017013	SNRPB	80	98.238	ENSEASG00005012991	SNRPB	98	98.238	Equus_asinus_asinus
ENSPVAG00000017013	SNRPB	80	98.678	ENSECAG00000011944	SNRPB	98	98.678	Equus_caballus
ENSPVAG00000017013	SNRPB	60	98.844	ENSEEUG00000015568	SNRPB	61	98.844	Erinaceus_europaeus
ENSPVAG00000017013	SNRPB	51	94.483	ENSELUG00000014564	snrpb	71	91.975	Esox_lucius
ENSPVAG00000017013	SNRPB	80	98.678	ENSFCAG00000034090	-	98	98.678	Felis_catus
ENSPVAG00000017013	SNRPB	60	94.767	ENSFALG00000004866	SNRPB	92	94.836	Ficedula_albicollis
ENSPVAG00000017013	SNRPB	80	98.678	ENSFDAG00000009937	SNRPB	98	98.678	Fukomys_damarensis
ENSPVAG00000017013	SNRPB	63	95.000	ENSGALG00000035421	SNRPN	92	95.023	Gallus_gallus
ENSPVAG00000017013	SNRPB	60	91.860	ENSGAFG00000019558	snrpb	72	92.814	Gambusia_affinis
ENSPVAG00000017013	SNRPB	64	89.617	ENSGACG00000003262	snrpb	70	93.452	Gasterosteus_aculeatus
ENSPVAG00000017013	SNRPB	77	95.475	ENSGAGG00000001308	SNRPB	92	95.475	Gopherus_agassizii
ENSPVAG00000017013	SNRPB	80	98.678	ENSGGOG00000016138	SNRPB	98	98.678	Gorilla_gorilla
ENSPVAG00000017013	SNRPB	63	91.713	ENSHBUG00000008369	snrpb	69	93.452	Haplochromis_burtoni
ENSPVAG00000017013	SNRPB	80	98.678	ENSHGLG00000016241	-	98	98.678	Heterocephalus_glaber_female
ENSPVAG00000017013	SNRPB	52	88.667	ENSHGLG00000016505	-	72	88.667	Heterocephalus_glaber_female
ENSPVAG00000017013	SNRPB	52	88.667	ENSHGLG00100004178	-	72	88.667	Heterocephalus_glaber_male
ENSPVAG00000017013	SNRPB	80	98.678	ENSHGLG00100012877	-	98	98.678	Heterocephalus_glaber_male
ENSPVAG00000017013	SNRPB	64	90.710	ENSHCOG00000014888	snrpb	70	93.452	Hippocampus_comes
ENSPVAG00000017013	SNRPB	60	91.908	ENSIPUG00000024569	SNRPB	72	91.329	Ictalurus_punctatus
ENSPVAG00000017013	SNRPB	76	81.019	ENSSTOG00000027821	-	62	97.794	Ictidomys_tridecemlineatus
ENSPVAG00000017013	SNRPB	80	96.916	ENSSTOG00000033664	-	95	96.916	Ictidomys_tridecemlineatus
ENSPVAG00000017013	SNRPB	80	98.678	ENSJJAG00000024170	Snrpb	98	98.678	Jaculus_jaculus
ENSPVAG00000017013	SNRPB	60	93.064	ENSKMAG00000014494	snrpb	68	94.048	Kryptolebias_marmoratus
ENSPVAG00000017013	SNRPB	64	90.710	ENSLBEG00000005678	snrpb	70	93.452	Labrus_bergylta
ENSPVAG00000017013	SNRPB	77	92.308	ENSLACG00000011459	SNRPB	92	92.308	Latimeria_chalumnae
ENSPVAG00000017013	SNRPB	59	92.857	ENSLOCG00000002687	snrpb	70	94.048	Lepisosteus_oculatus
ENSPVAG00000017013	SNRPB	79	94.690	ENSLAFG00000017588	SNRPB	98	94.690	Loxodonta_africana
ENSPVAG00000017013	SNRPB	80	98.678	ENSMFAG00000038756	SNRPB	98	98.678	Macaca_fascicularis
ENSPVAG00000017013	SNRPB	80	98.678	ENSMMUG00000010050	SNRPB	98	98.678	Macaca_mulatta
ENSPVAG00000017013	SNRPB	80	98.678	ENSMNEG00000027954	SNRPB	98	98.678	Macaca_nemestrina
ENSPVAG00000017013	SNRPB	80	98.678	ENSMLEG00000022346	SNRPB	98	98.678	Mandrillus_leucophaeus
ENSPVAG00000017013	SNRPB	63	91.667	ENSMAMG00000009294	snrpb	67	93.413	Mastacembelus_armatus
ENSPVAG00000017013	SNRPB	63	91.713	ENSMZEG00005011856	snrpb	69	93.452	Maylandia_zebra
ENSPVAG00000017013	SNRPB	80	98.238	ENSMICG00000016519	SNRPB	98	98.238	Microcebus_murinus
ENSPVAG00000017013	SNRPB	79	84.444	ENSMICG00000015983	-	87	88.889	Microcebus_murinus
ENSPVAG00000017013	SNRPB	58	68.862	ENSMOCG00000021362	-	72	72.254	Microtus_ochrogaster
ENSPVAG00000017013	SNRPB	86	92.623	ENSMOCG00000002892	-	98	98.238	Microtus_ochrogaster
ENSPVAG00000017013	SNRPB	64	90.659	ENSMMOG00000013226	snrpb	71	93.413	Mola_mola
ENSPVAG00000017013	SNRPB	63	91.160	ENSMALG00000020839	snrpb	56	92.857	Monopterus_albus
ENSPVAG00000017013	SNRPB	80	98.238	MGP_CAROLIEiJ_G0024293	Snrpb	98	98.238	Mus_caroli
ENSPVAG00000017013	SNRPB	80	98.238	ENSMUSG00000027404	Snrpb	98	98.238	Mus_musculus
ENSPVAG00000017013	SNRPB	80	98.238	MGP_PahariEiJ_G0025738	Snrpb	98	98.238	Mus_pahari
ENSPVAG00000017013	SNRPB	80	98.238	MGP_SPRETEiJ_G0025213	Snrpb	98	98.238	Mus_spretus
ENSPVAG00000017013	SNRPB	80	98.678	ENSMPUG00000009283	SNRPB	98	98.678	Mustela_putorius_furo
ENSPVAG00000017013	SNRPB	77	96.364	ENSMLUG00000016951	SNRPB	92	96.364	Myotis_lucifugus
ENSPVAG00000017013	SNRPB	80	98.678	ENSNGAG00000012051	Snrpb	98	98.678	Nannospalax_galili
ENSPVAG00000017013	SNRPB	62	90.395	ENSNBRG00000006353	snrpb	62	92.073	Neolamprologus_brichardi
ENSPVAG00000017013	SNRPB	80	98.678	ENSNLEG00000029067	SNRPB	95	98.678	Nomascus_leucogenys
ENSPVAG00000017013	SNRPB	79	96.444	ENSMEUG00000015625	SNRPB	100	96.444	Notamacropus_eugenii
ENSPVAG00000017013	SNRPB	79	95.575	ENSODEG00000016060	-	95	95.575	Octodon_degus
ENSPVAG00000017013	SNRPB	80	98.678	ENSODEG00000004305	-	98	98.678	Octodon_degus
ENSPVAG00000017013	SNRPB	63	91.713	ENSONIG00000000248	snrpb	69	93.452	Oreochromis_niloticus
ENSPVAG00000017013	SNRPB	63	92.179	ENSOCUG00000022423	-	86	95.238	Oryctolagus_cuniculus
ENSPVAG00000017013	SNRPB	74	71.564	ENSOCUG00000026813	-	70	71.341	Oryctolagus_cuniculus
ENSPVAG00000017013	SNRPB	80	95.595	ENSOCUG00000028215	-	95	95.595	Oryctolagus_cuniculus
ENSPVAG00000017013	SNRPB	75	93.953	ENSOCUG00000021456	-	78	94.709	Oryctolagus_cuniculus
ENSPVAG00000017013	SNRPB	80	98.238	ENSOCUG00000014042	-	95	98.238	Oryctolagus_cuniculus
ENSPVAG00000017013	SNRPB	63	91.160	ENSORLG00000021862	snrpb	69	93.452	Oryzias_latipes
ENSPVAG00000017013	SNRPB	80	98.678	ENSOGAG00000016149	SNRPB	95	98.678	Otolemur_garnettii
ENSPVAG00000017013	SNRPB	80	98.238	ENSOARG00000006740	SNRPB	98	98.238	Ovis_aries
ENSPVAG00000017013	SNRPB	80	98.678	ENSPPAG00000036314	SNRPB	98	98.678	Pan_paniscus
ENSPVAG00000017013	SNRPB	80	98.678	ENSPPRG00000003233	-	98	98.678	Panthera_pardus
ENSPVAG00000017013	SNRPB	79	98.673	ENSPTIG00000007468	SNRPB	98	98.673	Panthera_tigris_altaica
ENSPVAG00000017013	SNRPB	80	98.678	ENSPTRG00000013176	SNRPB	98	98.678	Pan_troglodytes
ENSPVAG00000017013	SNRPB	80	98.678	ENSPANG00000020362	SNRPB	95	98.678	Papio_anubis
ENSPVAG00000017013	SNRPB	59	91.071	ENSPKIG00000002865	snrpb	70	92.857	Paramormyrops_kingsleyae
ENSPVAG00000017013	SNRPB	77	95.455	ENSPSIG00000014125	SNRPB	91	95.455	Pelodiscus_sinensis
ENSPVAG00000017013	SNRPB	62	89.326	ENSPMGG00000016349	snrpb	69	90.798	Periophthalmus_magnuspinnatus
ENSPVAG00000017013	SNRPB	80	98.678	ENSPEMG00000007948	Snrpb	98	98.678	Peromyscus_maniculatus_bairdii
ENSPVAG00000017013	SNRPB	79	96.460	ENSPCIG00000004694	SNRPB	94	96.460	Phascolarctos_cinereus
ENSPVAG00000017013	SNRPB	68	82.051	ENSPFOG00000011802	snrpb	63	94.631	Poecilia_formosa
ENSPVAG00000017013	SNRPB	66	75.263	ENSPLAG00000014130	snrpb	59	94.074	Poecilia_latipinna
ENSPVAG00000017013	SNRPB	66	75.789	ENSPREG00000015515	snrpb	62	94.074	Poecilia_reticulata
ENSPVAG00000017013	SNRPB	80	98.678	ENSPPYG00000010841	SNRPB	98	98.678	Pongo_abelii
ENSPVAG00000017013	SNRPB	80	98.678	ENSPCOG00000013686	SNRPB	98	98.678	Propithecus_coquereli
ENSPVAG00000017013	SNRPB	63	91.713	ENSPNYG00000014788	snrpb	69	93.452	Pundamilia_nyererei
ENSPVAG00000017013	SNRPB	77	92.308	ENSPNAG00000016126	snrpb	92	91.855	Pygocentrus_nattereri
ENSPVAG00000017013	SNRPB	80	98.678	ENSRNOG00000006961	Snrpb	98	98.678	Rattus_norvegicus
ENSPVAG00000017013	SNRPB	80	98.238	ENSRBIG00000040505	SNRPB	98	98.238	Rhinopithecus_bieti
ENSPVAG00000017013	SNRPB	80	98.678	ENSRROG00000036094	SNRPB	98	98.678	Rhinopithecus_roxellana
ENSPVAG00000017013	SNRPB	80	98.678	ENSSBOG00000027310	SNRPB	98	98.678	Saimiri_boliviensis_boliviensis
ENSPVAG00000017013	SNRPB	80	96.916	ENSSHAG00000010394	SNRPB	95	96.916	Sarcophilus_harrisii
ENSPVAG00000017013	SNRPB	59	91.071	ENSSFOG00015002870	snrpb	70	92.262	Scleropages_formosus
ENSPVAG00000017013	SNRPB	64	90.164	ENSSMAG00000006766	snrpb	70	92.857	Scophthalmus_maximus
ENSPVAG00000017013	SNRPB	63	91.713	ENSSDUG00000018539	snrpb	69	93.452	Seriola_dumerili
ENSPVAG00000017013	SNRPB	63	91.713	ENSSLDG00000022391	snrpb	69	93.452	Seriola_lalandi_dorsalis
ENSPVAG00000017013	SNRPB	60	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSPVAG00000017013	SNRPB	77	95.455	ENSSPUG00000015659	SNRPB	92	95.455	Sphenodon_punctatus
ENSPVAG00000017013	SNRPB	63	91.713	ENSSPAG00000021992	snrpb	69	93.452	Stegastes_partitus
ENSPVAG00000017013	SNRPB	80	98.238	ENSSSCG00000040857	-	98	98.238	Sus_scrofa
ENSPVAG00000017013	SNRPB	74	79.147	ENSSSCG00000011966	-	91	75.829	Sus_scrofa
ENSPVAG00000017013	SNRPB	62	78.531	ENSTGUG00000005684	SNRPB	59	95.000	Taeniopygia_guttata
ENSPVAG00000017013	SNRPB	64	90.710	ENSTRUG00000023094	snrpb	72	92.857	Takifugu_rubripes
ENSPVAG00000017013	SNRPB	64	90.710	ENSTNIG00000002991	snrpb	70	92.857	Tetraodon_nigroviridis
ENSPVAG00000017013	SNRPB	60	98.844	ENSUAMG00000005984	-	83	98.844	Ursus_americanus
ENSPVAG00000017013	SNRPB	95	41.017	ENSVVUG00000018297	-	87	41.017	Vulpes_vulpes
ENSPVAG00000017013	SNRPB	79	80.000	ENSVVUG00000010086	-	85	81.443	Vulpes_vulpes
ENSPVAG00000017013	SNRPB	80	98.238	ENSVVUG00000025654	-	95	98.238	Vulpes_vulpes
ENSPVAG00000017013	SNRPB	77	94.570	ENSXETG00000027266	snrpb	72	94.118	Xenopus_tropicalis
ENSPVAG00000017013	SNRPB	60	77.778	ENSXMAG00000028767	snrpb	58	94.074	Xiphophorus_maculatus