EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017031 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 330714 bases
Position: chrGeneScaffold_1996:153422-484135
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016063	CMS1	PF14617.6	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017029	CMSS1-201	840	-	ENSPVAP00000016063	279 (aa)	-	UPI00018B4351

Gene Model

Click here to download ENSPVAG00000017031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017031	CMSS1	100	77.419	ENSG00000184220	CMSS1	99	91.358	Homo_sapiens
ENSPVAG00000017031	CMSS1	72	52.970	ENSAPOG00000010604	cmss1	81	52.500	Acanthochromis_polyacanthus
ENSPVAG00000017031	CMSS1	92	78.378	ENSAMEG00000004092	CMSS1	100	78.378	Ailuropoda_melanoleuca
ENSPVAG00000017031	CMSS1	72	44.059	ENSACIG00000021854	cmss1	91	42.562	Amphilophus_citrinellus
ENSPVAG00000017031	CMSS1	100	44.218	ENSAOCG00000013361	cmss1	100	44.558	Amphiprion_ocellaris
ENSPVAG00000017031	CMSS1	100	44.138	ENSAPEG00000005829	cmss1	100	44.850	Amphiprion_percula
ENSPVAG00000017031	CMSS1	100	46.367	ENSATEG00000008209	cmss1	100	45.890	Anabas_testudineus
ENSPVAG00000017031	CMSS1	82	58.261	ENSAPLG00000010542	CMSS1	100	58.261	Anas_platyrhynchos
ENSPVAG00000017031	CMSS1	95	56.044	ENSACAG00000011065	CMSS1	100	56.044	Anolis_carolinensis
ENSPVAG00000017031	CMSS1	100	77.857	ENSANAG00000023565	CMSS1	100	77.857	Aotus_nancymaae
ENSPVAG00000017031	CMSS1	100	42.384	ENSACLG00000027294	cmss1	100	43.986	Astatotilapia_calliptera
ENSPVAG00000017031	CMSS1	100	38.591	ENSAMXG00000002046	cmss1	100	41.356	Astyanax_mexicanus
ENSPVAG00000017031	CMSS1	100	78.853	ENSBTAG00000013663	CMSS1	100	78.853	Bos_taurus
ENSPVAG00000017031	CMSS1	100	76.786	ENSCJAG00000000610	CMSS1	100	76.786	Callithrix_jacchus
ENSPVAG00000017031	CMSS1	93	79.923	ENSCAFG00000009230	CMSS1	94	79.923	Canis_familiaris
ENSPVAG00000017031	CMSS1	92	80.156	ENSCAFG00020009464	-	94	80.156	Canis_lupus_dingo
ENSPVAG00000017031	CMSS1	83	72.414	ENSCAFG00020024156	-	76	69.388	Canis_lupus_dingo
ENSPVAG00000017031	CMSS1	93	78.764	ENSCHIG00000013003	CMSS1	94	78.764	Capra_hircus
ENSPVAG00000017031	CMSS1	94	76.628	ENSTSYG00000009266	CMSS1	100	76.628	Carlito_syrichta
ENSPVAG00000017031	CMSS1	80	58.515	ENSCAPG00000013584	CMSS1	100	58.952	Cavia_aperea
ENSPVAG00000017031	CMSS1	100	74.552	ENSCPOG00000014680	CMSS1	100	74.552	Cavia_porcellus
ENSPVAG00000017031	CMSS1	100	79.643	ENSCCAG00000034685	CMSS1	100	79.643	Cebus_capucinus
ENSPVAG00000017031	CMSS1	100	78.853	ENSCATG00000031980	CMSS1	100	78.853	Cercocebus_atys
ENSPVAG00000017031	CMSS1	82	79.476	ENSCLAG00000011241	CMSS1	98	79.476	Chinchilla_lanigera
ENSPVAG00000017031	CMSS1	88	79.184	ENSCSAG00000006024	CMSS1	100	79.184	Chlorocebus_sabaeus
ENSPVAG00000017031	CMSS1	100	61.290	ENSCHOG00000012098	CMSS1	100	61.290	Choloepus_hoffmanni
ENSPVAG00000017031	CMSS1	80	32.609	ENSCING00000014848	-	99	33.155	Ciona_intestinalis
ENSPVAG00000017031	CMSS1	100	78.495	ENSCANG00000031337	CMSS1	100	78.495	Colobus_angolensis_palliatus
ENSPVAG00000017031	CMSS1	100	71.326	ENSCGRG00001014305	Cmss1	100	71.326	Cricetulus_griseus_chok1gshd
ENSPVAG00000017031	CMSS1	92	72.266	ENSCGRG00000006722	Cmss1	99	72.266	Cricetulus_griseus_crigri
ENSPVAG00000017031	CMSS1	100	42.761	ENSCSEG00000004958	cmss1	100	43.421	Cynoglossus_semilaevis
ENSPVAG00000017031	CMSS1	100	45.329	ENSCVAG00000005039	cmss1	100	46.048	Cyprinodon_variegatus
ENSPVAG00000017031	CMSS1	100	41.333	ENSDARG00000112579	cmss1	100	41.438	Danio_rerio
ENSPVAG00000017031	CMSS1	97	72.694	ENSDNOG00000040418	CMSS1	96	72.694	Dasypus_novemcinctus
ENSPVAG00000017031	CMSS1	100	78.495	ENSDORG00000010461	Cmss1	100	78.495	Dipodomys_ordii
ENSPVAG00000017031	CMSS1	96	69.517	ENSEASG00005010966	CMSS1	99	78.539	Equus_asinus_asinus
ENSPVAG00000017031	CMSS1	94	75.479	ENSECAG00000015662	CMSS1	99	76.549	Equus_caballus
ENSPVAG00000017031	CMSS1	100	46.237	ENSEEUG00000007624	-	100	46.237	Erinaceus_europaeus
ENSPVAG00000017031	CMSS1	100	43.667	ENSELUG00000019459	cmss1	100	44.000	Esox_lucius
ENSPVAG00000017031	CMSS1	100	82.079	ENSFCAG00000044577	CMSS1	100	82.079	Felis_catus
ENSPVAG00000017031	CMSS1	86	55.649	ENSFALG00000005816	CMSS1	100	55.649	Ficedula_albicollis
ENSPVAG00000017031	CMSS1	82	76.754	ENSFDAG00000012577	CMSS1	100	76.754	Fukomys_damarensis
ENSPVAG00000017031	CMSS1	81	51.515	ENSFHEG00000012008	cmss1	95	51.515	Fundulus_heteroclitus
ENSPVAG00000017031	CMSS1	99	44.718	ENSGMOG00000016729	cmss1	100	45.423	Gadus_morhua
ENSPVAG00000017031	CMSS1	93	55.513	ENSGALG00000015267	CMSS1	100	55.172	Gallus_gallus
ENSPVAG00000017031	CMSS1	74	53.140	ENSGAFG00000021217	cmss1	76	52.500	Gambusia_affinis
ENSPVAG00000017031	CMSS1	99	41.489	ENSGACG00000002798	cmss1	100	41.844	Gasterosteus_aculeatus
ENSPVAG00000017031	CMSS1	93	58.397	ENSGAGG00000019861	CMSS1	98	58.397	Gopherus_agassizii
ENSPVAG00000017031	CMSS1	93	78.462	ENSGGOG00000014125	CMSS1	99	78.682	Gorilla_gorilla
ENSPVAG00000017031	CMSS1	100	42.525	ENSHBUG00000008431	cmss1	100	43.793	Haplochromis_burtoni
ENSPVAG00000017031	CMSS1	91	73.518	ENSHGLG00000019481	CMSS1	100	73.518	Heterocephalus_glaber_female
ENSPVAG00000017031	CMSS1	92	73.541	ENSHGLG00100010314	CMSS1	100	73.541	Heterocephalus_glaber_male
ENSPVAG00000017031	CMSS1	100	44.407	ENSHCOG00000003222	cmss1	100	47.119	Hippocampus_comes
ENSPVAG00000017031	CMSS1	100	41.724	ENSIPUG00000011591	cmss1	100	43.003	Ictalurus_punctatus
ENSPVAG00000017031	CMSS1	100	79.211	ENSSTOG00000019366	CMSS1	100	79.211	Ictidomys_tridecemlineatus
ENSPVAG00000017031	CMSS1	100	73.477	ENSJJAG00000014894	Cmss1	100	73.477	Jaculus_jaculus
ENSPVAG00000017031	CMSS1	72	44.554	ENSKMAG00000002390	cmss1	80	44.000	Kryptolebias_marmoratus
ENSPVAG00000017031	CMSS1	72	48.768	ENSLBEG00000006298	cmss1	82	48.259	Labrus_bergylta
ENSPVAG00000017031	CMSS1	82	53.043	ENSLACG00000009293	CMSS1	100	53.043	Latimeria_chalumnae
ENSPVAG00000017031	CMSS1	100	43.816	ENSLOCG00000009391	cmss1	100	44.876	Lepisosteus_oculatus
ENSPVAG00000017031	CMSS1	82	79.825	ENSLAFG00000017509	CMSS1	100	79.825	Loxodonta_africana
ENSPVAG00000017031	CMSS1	100	78.853	ENSMFAG00000045006	CMSS1	100	78.853	Macaca_fascicularis
ENSPVAG00000017031	CMSS1	100	78.495	ENSMMUG00000002939	CMSS1	100	78.495	Macaca_mulatta
ENSPVAG00000017031	CMSS1	100	78.853	ENSMNEG00000031315	CMSS1	100	78.853	Macaca_nemestrina
ENSPVAG00000017031	CMSS1	100	78.136	ENSMLEG00000033660	CMSS1	100	78.136	Mandrillus_leucophaeus
ENSPVAG00000017031	CMSS1	100	45.578	ENSMAMG00000017176	cmss1	100	45.172	Mastacembelus_armatus
ENSPVAG00000017031	CMSS1	100	42.384	ENSMZEG00005021886	cmss1	100	43.986	Maylandia_zebra
ENSPVAG00000017031	CMSS1	82	57.895	ENSMGAG00000014360	CMSS1	100	57.895	Meleagris_gallopavo
ENSPVAG00000017031	CMSS1	100	54.839	ENSMAUG00000020609	Cmss1	100	54.839	Mesocricetus_auratus
ENSPVAG00000017031	CMSS1	100	78.136	ENSMICG00000048977	CMSS1	100	78.136	Microcebus_murinus
ENSPVAG00000017031	CMSS1	100	71.685	ENSMOCG00000021937	Cmss1	100	71.685	Microtus_ochrogaster
ENSPVAG00000017031	CMSS1	72	51.485	ENSMMOG00000019794	cmss1	83	51.000	Mola_mola
ENSPVAG00000017031	CMSS1	94	65.267	ENSMODG00000002275	CMSS1	98	65.267	Monodelphis_domestica
ENSPVAG00000017031	CMSS1	100	45.017	ENSMALG00000004250	cmss1	100	45.270	Monopterus_albus
ENSPVAG00000017031	CMSS1	100	73.214	MGP_CAROLIEiJ_G0020824	Cmss1	100	73.214	Mus_caroli
ENSPVAG00000017031	CMSS1	100	73.929	ENSMUSG00000022748	Cmss1	100	73.929	Mus_musculus
ENSPVAG00000017031	CMSS1	100	71.429	MGP_PahariEiJ_G0016524	Cmss1	100	71.429	Mus_pahari
ENSPVAG00000017031	CMSS1	100	73.214	MGP_SPRETEiJ_G0021724	Cmss1	100	73.214	Mus_spretus
ENSPVAG00000017031	CMSS1	87	83.197	ENSMPUG00000011324	CMSS1	99	81.467	Mustela_putorius_furo
ENSPVAG00000017031	CMSS1	93	80.843	ENSMLUG00000001131	CMSS1	99	80.843	Myotis_lucifugus
ENSPVAG00000017031	CMSS1	100	74.194	ENSNGAG00000020316	Cmss1	100	74.194	Nannospalax_galili
ENSPVAG00000017031	CMSS1	100	42.715	ENSNBRG00000003095	cmss1	100	43.986	Neolamprologus_brichardi
ENSPVAG00000017031	CMSS1	100	79.211	ENSNLEG00000034172	CMSS1	100	79.211	Nomascus_leucogenys
ENSPVAG00000017031	CMSS1	82	79.386	ENSMEUG00000014505	CMSS1	100	79.386	Notamacropus_eugenii
ENSPVAG00000017031	CMSS1	100	80.645	ENSOPRG00000002986	CMSS1	100	80.645	Ochotona_princeps
ENSPVAG00000017031	CMSS1	100	74.910	ENSODEG00000005226	-	100	74.910	Octodon_degus
ENSPVAG00000017031	CMSS1	100	70.107	ENSODEG00000003558	-	100	70.107	Octodon_degus
ENSPVAG00000017031	CMSS1	100	66.308	ENSODEG00000001853	-	100	66.308	Octodon_degus
ENSPVAG00000017031	CMSS1	100	60.932	ENSODEG00000009446	-	100	60.932	Octodon_degus
ENSPVAG00000017031	CMSS1	72	51.485	ENSONIG00000006678	cmss1	93	47.107	Oreochromis_niloticus
ENSPVAG00000017031	CMSS1	92	61.154	ENSOANG00000007529	CMSS1	100	62.661	Ornithorhynchus_anatinus
ENSPVAG00000017031	CMSS1	93	80.695	ENSOCUG00000025366	CMSS1	94	80.695	Oryctolagus_cuniculus
ENSPVAG00000017031	CMSS1	100	47.368	ENSORLG00000020340	cmss1	100	48.432	Oryzias_latipes
ENSPVAG00000017031	CMSS1	82	44.105	ENSORLG00020012235	cmss1	85	46.000	Oryzias_latipes_hni
ENSPVAG00000017031	CMSS1	72	46.535	ENSORLG00015015551	cmss1	75	46.000	Oryzias_latipes_hsok
ENSPVAG00000017031	CMSS1	100	47.059	ENSOMEG00000012555	cmss1	100	47.751	Oryzias_melastigma
ENSPVAG00000017031	CMSS1	82	78.070	ENSOGAG00000002045	CMSS1	100	78.070	Otolemur_garnettii
ENSPVAG00000017031	CMSS1	96	76.667	ENSOARG00000017899	CMSS1	93	76.667	Ovis_aries
ENSPVAG00000017031	CMSS1	92	78.682	ENSPPAG00000038515	CMSS1	95	78.682	Pan_paniscus
ENSPVAG00000017031	CMSS1	100	81.720	ENSPPRG00000016767	CMSS1	100	81.720	Panthera_pardus
ENSPVAG00000017031	CMSS1	100	81.720	ENSPTIG00000018274	CMSS1	100	81.720	Panthera_tigris_altaica
ENSPVAG00000017031	CMSS1	100	77.419	ENSPTRG00000015157	CMSS1	100	78.367	Pan_troglodytes
ENSPVAG00000017031	CMSS1	92	76.357	ENSPANG00000019980	CMSS1	99	76.357	Papio_anubis
ENSPVAG00000017031	CMSS1	80	55.794	ENSPKIG00000012609	cmss1	85	54.936	Paramormyrops_kingsleyae
ENSPVAG00000017031	CMSS1	82	63.319	ENSPSIG00000003849	CMSS1	100	63.319	Pelodiscus_sinensis
ENSPVAG00000017031	CMSS1	52	64.384	ENSPMGG00000010286	cmss1	63	63.889	Periophthalmus_magnuspinnatus
ENSPVAG00000017031	CMSS1	100	73.214	ENSPEMG00000016384	Cmss1	100	73.214	Peromyscus_maniculatus_bairdii
ENSPVAG00000017031	CMSS1	73	43.137	ENSPMAG00000001146	cmss1	98	43.000	Petromyzon_marinus
ENSPVAG00000017031	CMSS1	93	65.385	ENSPCIG00000015656	CMSS1	98	65.385	Phascolarctos_cinereus
ENSPVAG00000017031	CMSS1	100	44.948	ENSPFOG00000016849	cmss1	100	45.804	Poecilia_formosa
ENSPVAG00000017031	CMSS1	100	44.948	ENSPLAG00000008323	cmss1	100	45.804	Poecilia_latipinna
ENSPVAG00000017031	CMSS1	100	45.675	ENSPMEG00000021020	cmss1	100	45.833	Poecilia_mexicana
ENSPVAG00000017031	CMSS1	84	49.793	ENSPREG00000007618	cmss1	82	50.417	Poecilia_reticulata
ENSPVAG00000017031	CMSS1	100	77.419	ENSPPYG00000013606	CMSS1	100	77.419	Pongo_abelii
ENSPVAG00000017031	CMSS1	100	78.853	ENSPCOG00000020035	CMSS1	100	78.853	Propithecus_coquereli
ENSPVAG00000017031	CMSS1	80	46.939	ENSPNYG00000013428	cmss1	86	49.145	Pundamilia_nyererei
ENSPVAG00000017031	CMSS1	100	43.771	ENSPNAG00000007912	cmss1	100	44.108	Pygocentrus_nattereri
ENSPVAG00000017031	CMSS1	93	72.308	ENSRNOG00000027888	Cmss1	100	72.308	Rattus_norvegicus
ENSPVAG00000017031	CMSS1	100	77.419	ENSRBIG00000037931	CMSS1	100	77.419	Rhinopithecus_bieti
ENSPVAG00000017031	CMSS1	100	77.419	ENSRROG00000042910	CMSS1	100	77.419	Rhinopithecus_roxellana
ENSPVAG00000017031	CMSS1	100	74.643	ENSSBOG00000030980	CMSS1	99	79.151	Saimiri_boliviensis_boliviensis
ENSPVAG00000017031	CMSS1	89	64.286	ENSSHAG00000009321	CMSS1	99	64.286	Sarcophilus_harrisii
ENSPVAG00000017031	CMSS1	100	46.959	ENSSFOG00015001509	cmss1	100	47.797	Scleropages_formosus
ENSPVAG00000017031	CMSS1	100	45.704	ENSSMAG00000001653	cmss1	100	45.361	Scophthalmus_maximus
ENSPVAG00000017031	CMSS1	100	45.139	ENSSDUG00000007719	cmss1	100	45.890	Seriola_dumerili
ENSPVAG00000017031	CMSS1	74	53.140	ENSSLDG00000012300	cmss1	75	59.890	Seriola_lalandi_dorsalis
ENSPVAG00000017031	CMSS1	100	85.000	ENSSARG00000003584	CMSS1	100	85.000	Sorex_araneus
ENSPVAG00000017031	CMSS1	81	59.292	ENSSPUG00000003865	CMSS1	100	59.292	Sphenodon_punctatus
ENSPVAG00000017031	CMSS1	74	53.398	ENSSPAG00000019182	cmss1	62	53.000	Stegastes_partitus
ENSPVAG00000017031	CMSS1	100	82.437	ENSSSCG00000011970	CMSS1	100	82.437	Sus_scrofa
ENSPVAG00000017031	CMSS1	82	56.332	ENSTGUG00000013635	CMSS1	100	56.332	Taeniopygia_guttata
ENSPVAG00000017031	CMSS1	100	42.553	ENSTRUG00000015265	cmss1	100	42.908	Takifugu_rubripes
ENSPVAG00000017031	CMSS1	72	50.495	ENSTNIG00000002880	cmss1	72	50.000	Tetraodon_nigroviridis
ENSPVAG00000017031	CMSS1	100	51.071	ENSTBEG00000016722	CMSS1	100	51.071	Tupaia_belangeri
ENSPVAG00000017031	CMSS1	100	75.986	ENSTTRG00000001562	CMSS1	100	75.986	Tursiops_truncatus
ENSPVAG00000017031	CMSS1	97	77.372	ENSUAMG00000024209	CMSS1	100	80.269	Ursus_americanus
ENSPVAG00000017031	CMSS1	95	77.652	ENSUMAG00000001983	CMSS1	99	79.377	Ursus_maritimus
ENSPVAG00000017031	CMSS1	100	56.272	ENSVPAG00000000263	CMSS1	100	56.272	Vicugna_pacos
ENSPVAG00000017031	CMSS1	88	79.268	ENSVVUG00000021647	-	100	79.268	Vulpes_vulpes
ENSPVAG00000017031	CMSS1	79	78.636	ENSVVUG00000007776	-	87	78.636	Vulpes_vulpes
ENSPVAG00000017031	CMSS1	100	45.907	ENSXETG00000011858	cmss1	100	45.907	Xenopus_tropicalis
ENSPVAG00000017031	CMSS1	75	51.923	ENSXCOG00000018724	cmss1	68	51.500	Xiphophorus_couchianus
ENSPVAG00000017031	CMSS1	75	51.923	ENSXMAG00000011243	cmss1	75	51.500	Xiphophorus_maculatus