EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000017053 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 331326 bases
Position: chrGeneScaffold_2316:14-331339
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016085	RRM_1	PF00076.22	4.5e-30	1	2
ENSPVAP00000016085	RRM_1	PF00076.22	4.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017053	MSI2-201	882	-	ENSPVAP00000016085	293 (aa)	-	UPI00018B3F28

Gene Model

Click here to download ENSPVAG00000017053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000017053	MSI2	51	42.105	ENSPVAG00000005629	CIRBP	55	42.105
ENSPVAG00000017053	MSI2	54	47.712	ENSPVAG00000000003	HNRNPD	56	46.243
ENSPVAG00000017053	MSI2	82	87.413	ENSPVAG00000002225	MSI1	63	87.413
ENSPVAG00000017053	MSI2	55	41.772	ENSPVAG00000000322	-	51	40.476
ENSPVAG00000017053	MSI2	55	40.698	ENSPVAG00000006296	HNRNPA2B1	51	40.230
ENSPVAG00000017053	MSI2	54	43.860	ENSPVAG00000015630	RBM3	72	43.860
ENSPVAG00000017053	MSI2	55	42.405	ENSPVAG00000010380	HNRNPA3	51	42.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017053	MSI2	100	90.785	ENSG00000153944	MSI2	86	100.000	Homo_sapiens
ENSPVAG00000017053	MSI2	99	85.274	ENSAPOG00000001658	msi2a	93	85.274	Acanthochromis_polyacanthus
ENSPVAG00000017053	MSI2	100	85.531	ENSAMEG00000002697	MSI2	99	85.531	Ailuropoda_melanoleuca
ENSPVAG00000017053	MSI2	99	87.500	ENSACIG00000009475	msi2a	65	95.028	Amphilophus_citrinellus
ENSPVAG00000017053	MSI2	53	85.965	ENSAOCG00000014822	msi2a	58	85.965	Amphiprion_ocellaris
ENSPVAG00000017053	MSI2	99	85.274	ENSAPEG00000007706	msi2a	93	85.274	Amphiprion_percula
ENSPVAG00000017053	MSI2	99	85.274	ENSATEG00000010498	msi2a	93	85.274	Anabas_testudineus
ENSPVAG00000017053	MSI2	99	84.892	ENSATEG00000003301	-	100	84.892	Anabas_testudineus
ENSPVAG00000017053	MSI2	86	99.363	ENSACAG00000005452	MSI2	56	99.363	Anolis_carolinensis
ENSPVAG00000017053	MSI2	100	90.785	ENSANAG00000037827	MSI2	94	90.785	Aotus_nancymaae
ENSPVAG00000017053	MSI2	99	84.932	ENSACLG00000007752	msi2a	93	84.932	Astatotilapia_calliptera
ENSPVAG00000017053	MSI2	100	88.055	ENSAMXG00000010474	msi2b	97	88.055	Astyanax_mexicanus
ENSPVAG00000017053	MSI2	100	87.075	ENSAMXG00000032796	msi2a	94	85.034	Astyanax_mexicanus
ENSPVAG00000017053	MSI2	100	90.444	ENSBTAG00000004406	MSI2	97	90.444	Bos_taurus
ENSPVAG00000017053	MSI2	61	74.684	WBGene00003423	msi-1	54	74.684	Caenorhabditis_elegans
ENSPVAG00000017053	MSI2	100	90.785	ENSCJAG00000013998	MSI2	94	90.785	Callithrix_jacchus
ENSPVAG00000017053	MSI2	100	85.531	ENSCAFG00020025620	MSI2	81	85.531	Canis_lupus_dingo
ENSPVAG00000017053	MSI2	100	90.444	ENSCHIG00000016580	MSI2	94	90.444	Capra_hircus
ENSPVAG00000017053	MSI2	99	85.816	ENSCPOG00000034042	MSI2	99	85.816	Cavia_porcellus
ENSPVAG00000017053	MSI2	100	90.785	ENSCCAG00000033927	MSI2	94	90.785	Cebus_capucinus
ENSPVAG00000017053	MSI2	100	90.785	ENSCATG00000040879	MSI2	94	90.785	Cercocebus_atys
ENSPVAG00000017053	MSI2	100	85.531	ENSCLAG00000014325	MSI2	94	85.531	Chinchilla_lanigera
ENSPVAG00000017053	MSI2	100	90.785	ENSCSAG00000005633	MSI2	94	90.785	Chlorocebus_sabaeus
ENSPVAG00000017053	MSI2	96	78.929	ENSCHOG00000008660	MSI2	100	78.929	Choloepus_hoffmanni
ENSPVAG00000017053	MSI2	99	91.549	ENSCPBG00000009942	MSI2	95	83.146	Chrysemys_picta_bellii
ENSPVAG00000017053	MSI2	61	68.063	ENSCSAVG00000010397	-	66	68.063	Ciona_savignyi
ENSPVAG00000017053	MSI2	99	87.556	ENSCANG00000036414	MSI2	100	85.531	Colobus_angolensis_palliatus
ENSPVAG00000017053	MSI2	100	90.476	ENSCGRG00001013330	Msi2	94	90.476	Cricetulus_griseus_chok1gshd
ENSPVAG00000017053	MSI2	100	85.256	ENSCGRG00000003141	Msi2	100	85.256	Cricetulus_griseus_crigri
ENSPVAG00000017053	MSI2	100	76.451	ENSCSEG00000003266	-	91	76.451	Cynoglossus_semilaevis
ENSPVAG00000017053	MSI2	87	62.887	ENSCSEG00000013557	msi2a	63	86.667	Cynoglossus_semilaevis
ENSPVAG00000017053	MSI2	52	70.470	ENSCSEG00000013549	msi2a	88	70.470	Cynoglossus_semilaevis
ENSPVAG00000017053	MSI2	100	79.322	ENSCVAG00000017075	msi2a	92	84.532	Cyprinodon_variegatus
ENSPVAG00000017053	MSI2	97	86.574	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSPVAG00000017053	MSI2	100	69.688	ENSDARG00000033901	msi2a	68	95.604	Danio_rerio
ENSPVAG00000017053	MSI2	99	90.625	ENSDNOG00000014501	MSI2	100	90.625	Dasypus_novemcinctus
ENSPVAG00000017053	MSI2	53	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSPVAG00000017053	MSI2	87	85.567	ENSDORG00000005394	Msi2	84	85.567	Dipodomys_ordii
ENSPVAG00000017053	MSI2	84	74.595	FBgn0260943	Rbp6	72	75.410	Drosophila_melanogaster
ENSPVAG00000017053	MSI2	98	59.105	ENSEBUG00000006732	msi2a	67	83.060	Eptatretus_burgeri
ENSPVAG00000017053	MSI2	91	100.000	ENSEASG00005002965	MSI2	73	100.000	Equus_asinus_asinus
ENSPVAG00000017053	MSI2	96	90.357	ENSECAG00000011435	MSI2	94	82.445	Equus_caballus
ENSPVAG00000017053	MSI2	92	74.704	ENSEEUG00000007810	MSI2	100	74.704	Erinaceus_europaeus
ENSPVAG00000017053	MSI2	99	86.644	ENSELUG00000011747	msi2a	93	86.644	Esox_lucius
ENSPVAG00000017053	MSI2	100	86.463	ENSELUG00000001361	msi2b	93	81.150	Esox_lucius
ENSPVAG00000017053	MSI2	100	90.785	ENSFCAG00000041686	MSI2	94	90.785	Felis_catus
ENSPVAG00000017053	MSI2	52	82.645	ENSFCAG00000033787	-	67	82.645	Felis_catus
ENSPVAG00000017053	MSI2	100	85.531	ENSFDAG00000016118	MSI2	100	85.531	Fukomys_damarensis
ENSPVAG00000017053	MSI2	99	84.932	ENSFHEG00000000084	msi2a	93	84.932	Fundulus_heteroclitus
ENSPVAG00000017053	MSI2	50	95.652	ENSGMOG00000007596	-	80	95.652	Gadus_morhua
ENSPVAG00000017053	MSI2	100	84.244	ENSGALG00000005567	MSI2	94	84.244	Gallus_gallus
ENSPVAG00000017053	MSI2	95	76.325	ENSGAFG00000006974	msi2a	78	95.690	Gambusia_affinis
ENSPVAG00000017053	MSI2	85	99.435	ENSGAGG00000016542	MSI2	100	80.921	Gopherus_agassizii
ENSPVAG00000017053	MSI2	99	87.556	ENSGGOG00000013182	MSI2	100	85.531	Gorilla_gorilla
ENSPVAG00000017053	MSI2	99	84.932	ENSHBUG00000020800	msi2a	93	84.932	Haplochromis_burtoni
ENSPVAG00000017053	MSI2	100	75.563	ENSHGLG00000012444	MSI2	89	75.563	Heterocephalus_glaber_female
ENSPVAG00000017053	MSI2	84	78.261	ENSHGLG00100003744	MSI2	100	78.261	Heterocephalus_glaber_male
ENSPVAG00000017053	MSI2	53	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSPVAG00000017053	MSI2	94	76.856	ENSHCOG00000017241	-	57	87.912	Hippocampus_comes
ENSPVAG00000017053	MSI2	97	83.333	ENSHCOG00000000266	msi2a	91	76.898	Hippocampus_comes
ENSPVAG00000017053	MSI2	85	99.451	ENSIPUG00000003732	msi2b	93	83.904	Ictalurus_punctatus
ENSPVAG00000017053	MSI2	99	86.301	ENSIPUG00000021097	msi2a	93	84.932	Ictalurus_punctatus
ENSPVAG00000017053	MSI2	99	85.816	ENSSTOG00000007884	MSI2	99	85.816	Ictidomys_tridecemlineatus
ENSPVAG00000017053	MSI2	84	72.772	ENSJJAG00000006292	-	100	70.352	Jaculus_jaculus
ENSPVAG00000017053	MSI2	53	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSPVAG00000017053	MSI2	99	85.938	ENSKMAG00000009494	msi2a	89	83.871	Kryptolebias_marmoratus
ENSPVAG00000017053	MSI2	99	60.411	ENSLBEG00000026223	-	69	88.623	Labrus_bergylta
ENSPVAG00000017053	MSI2	99	85.274	ENSLBEG00000007061	msi2a	93	85.274	Labrus_bergylta
ENSPVAG00000017053	MSI2	52	97.101	ENSLACG00000016798	MSI2	89	97.101	Latimeria_chalumnae
ENSPVAG00000017053	MSI2	100	72.159	ENSLOCG00000004675	msi2b	68	98.901	Lepisosteus_oculatus
ENSPVAG00000017053	MSI2	99	87.556	ENSMFAG00000003775	MSI2	100	85.531	Macaca_fascicularis
ENSPVAG00000017053	MSI2	99	87.556	ENSMMUG00000002069	MSI2	100	85.531	Macaca_mulatta
ENSPVAG00000017053	MSI2	100	90.785	ENSMNEG00000045275	MSI2	94	90.785	Macaca_nemestrina
ENSPVAG00000017053	MSI2	99	87.556	ENSMLEG00000033888	MSI2	100	85.531	Mandrillus_leucophaeus
ENSPVAG00000017053	MSI2	99	82.877	ENSMAMG00000002488	-	85	95.690	Mastacembelus_armatus
ENSPVAG00000017053	MSI2	99	84.642	ENSMAMG00000010503	msi2a	93	82.935	Mastacembelus_armatus
ENSPVAG00000017053	MSI2	100	84.983	ENSMZEG00005007676	msi2a	94	84.983	Maylandia_zebra
ENSPVAG00000017053	MSI2	100	85.256	ENSMAUG00000003862	Msi2	94	85.256	Mesocricetus_auratus
ENSPVAG00000017053	MSI2	100	90.785	ENSMICG00000013598	-	94	90.785	Microcebus_murinus
ENSPVAG00000017053	MSI2	100	61.616	ENSMICG00000032913	-	93	71.769	Microcebus_murinus
ENSPVAG00000017053	MSI2	100	85.531	ENSMOCG00000005820	Msi2	94	85.531	Microtus_ochrogaster
ENSPVAG00000017053	MSI2	95	77.500	ENSMMOG00000008348	msi2a	76	95.690	Mola_mola
ENSPVAG00000017053	MSI2	84	77.295	ENSMODG00000014790	MSI2	100	77.295	Monodelphis_domestica
ENSPVAG00000017053	MSI2	99	81.849	ENSMALG00000000071	msi2a	93	81.849	Monopterus_albus
ENSPVAG00000017053	MSI2	100	90.785	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSPVAG00000017053	MSI2	100	90.785	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSPVAG00000017053	MSI2	100	90.785	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSPVAG00000017053	MSI2	100	90.785	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSPVAG00000017053	MSI2	100	90.785	ENSMPUG00000015377	MSI2	97	90.785	Mustela_putorius_furo
ENSPVAG00000017053	MSI2	100	90.785	ENSMLUG00000007865	MSI2	97	90.785	Myotis_lucifugus
ENSPVAG00000017053	MSI2	100	85.531	ENSNGAG00000017807	Msi2	94	85.531	Nannospalax_galili
ENSPVAG00000017053	MSI2	99	84.932	ENSNBRG00000014596	msi2a	93	84.932	Neolamprologus_brichardi
ENSPVAG00000017053	MSI2	99	87.556	ENSNLEG00000008059	MSI2	100	85.531	Nomascus_leucogenys
ENSPVAG00000017053	MSI2	62	86.614	ENSOPRG00000000872	-	53	86.614	Ochotona_princeps
ENSPVAG00000017053	MSI2	100	85.531	ENSODEG00000011974	MSI2	94	85.531	Octodon_degus
ENSPVAG00000017053	MSI2	53	95.690	ENSONIG00000001972	msi2a	72	95.690	Oreochromis_niloticus
ENSPVAG00000017053	MSI2	85	99.451	ENSOANG00000005667	MSI2	63	99.451	Ornithorhynchus_anatinus
ENSPVAG00000017053	MSI2	100	90.785	ENSOCUG00000010440	MSI2	97	90.785	Oryctolagus_cuniculus
ENSPVAG00000017053	MSI2	99	85.274	ENSORLG00000009671	msi2a	94	85.274	Oryzias_latipes
ENSPVAG00000017053	MSI2	99	85.274	ENSORLG00020021556	msi2a	94	85.274	Oryzias_latipes_hni
ENSPVAG00000017053	MSI2	99	85.274	ENSORLG00015004592	msi2a	94	85.274	Oryzias_latipes_hsok
ENSPVAG00000017053	MSI2	100	85.324	ENSOMEG00000000146	msi2a	96	85.324	Oryzias_melastigma
ENSPVAG00000017053	MSI2	100	86.007	ENSOGAG00000005621	MSI2	99	86.007	Otolemur_garnettii
ENSPVAG00000017053	MSI2	100	85.531	ENSPPAG00000037697	MSI2	100	85.531	Pan_paniscus
ENSPVAG00000017053	MSI2	100	90.785	ENSPPRG00000001848	MSI2	94	90.785	Panthera_pardus
ENSPVAG00000017053	MSI2	100	85.531	ENSPTIG00000021678	MSI2	96	85.531	Panthera_tigris_altaica
ENSPVAG00000017053	MSI2	62	83.516	ENSPTIG00000021873	-	70	83.516	Panthera_tigris_altaica
ENSPVAG00000017053	MSI2	99	87.556	ENSPTRG00000009437	MSI2	100	85.531	Pan_troglodytes
ENSPVAG00000017053	MSI2	100	90.785	ENSPANG00000022319	MSI2	94	90.785	Papio_anubis
ENSPVAG00000017053	MSI2	96	82.500	ENSPKIG00000007038	-	90	78.305	Paramormyrops_kingsleyae
ENSPVAG00000017053	MSI2	86	99.451	ENSPSIG00000008618	MSI2	65	99.451	Pelodiscus_sinensis
ENSPVAG00000017053	MSI2	99	84.932	ENSPMGG00000005888	msi2a	93	84.932	Periophthalmus_magnuspinnatus
ENSPVAG00000017053	MSI2	53	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000017053	MSI2	100	84.566	ENSPCIG00000006063	MSI2	94	81.505	Phascolarctos_cinereus
ENSPVAG00000017053	MSI2	52	92.857	ENSPFOG00000019337	MSI2	74	92.857	Poecilia_formosa
ENSPVAG00000017053	MSI2	53	90.741	ENSPLAG00000000436	msi2a	64	91.589	Poecilia_latipinna
ENSPVAG00000017053	MSI2	53	90.654	ENSPMEG00000013247	msi2a	66	90.654	Poecilia_mexicana
ENSPVAG00000017053	MSI2	99	82.534	ENSPREG00000000881	msi2a	92	82.534	Poecilia_reticulata
ENSPVAG00000017053	MSI2	99	85.294	ENSPPYG00000008244	-	100	85.294	Pongo_abelii
ENSPVAG00000017053	MSI2	59	98.824	ENSPCAG00000010552	MSI2	73	98.824	Procavia_capensis
ENSPVAG00000017053	MSI2	53	100.000	ENSPCOG00000019195	-	93	100.000	Propithecus_coquereli
ENSPVAG00000017053	MSI2	100	84.983	ENSPNYG00000018393	msi2a	94	84.983	Pundamilia_nyererei
ENSPVAG00000017053	MSI2	99	87.372	ENSPNAG00000000844	msi2b	93	85.666	Pygocentrus_nattereri
ENSPVAG00000017053	MSI2	100	87.075	ENSPNAG00000014957	msi2a	94	85.374	Pygocentrus_nattereri
ENSPVAG00000017053	MSI2	99	90.288	ENSRNOG00000025338	Msi2	100	90.288	Rattus_norvegicus
ENSPVAG00000017053	MSI2	53	100.000	ENSRROG00000034421	-	92	100.000	Rhinopithecus_roxellana
ENSPVAG00000017053	MSI2	99	87.946	ENSSBOG00000026425	MSI2	100	85.531	Saimiri_boliviensis_boliviensis
ENSPVAG00000017053	MSI2	100	84.566	ENSSHAG00000008672	MSI2	100	84.566	Sarcophilus_harrisii
ENSPVAG00000017053	MSI2	86	87.500	ENSSFOG00015012168	msi2b	61	87.500	Scleropages_formosus
ENSPVAG00000017053	MSI2	99	81.507	ENSSFOG00015021687	-	97	79.795	Scleropages_formosus
ENSPVAG00000017053	MSI2	99	85.274	ENSSMAG00000018484	msi2a	93	85.274	Scophthalmus_maximus
ENSPVAG00000017053	MSI2	99	85.274	ENSSDUG00000014507	msi2a	93	85.274	Seriola_dumerili
ENSPVAG00000017053	MSI2	100	80.198	ENSSDUG00000021968	-	86	94.828	Seriola_dumerili
ENSPVAG00000017053	MSI2	99	85.274	ENSSLDG00000017172	msi2a	93	85.274	Seriola_lalandi_dorsalis
ENSPVAG00000017053	MSI2	53	95.122	ENSSPUG00000000913	-	81	95.122	Sphenodon_punctatus
ENSPVAG00000017053	MSI2	97	83.824	ENSSPAG00000017793	msi2a	88	79.181	Stegastes_partitus
ENSPVAG00000017053	MSI2	100	90.785	ENSSSCG00000038505	MSI2	94	90.785	Sus_scrofa
ENSPVAG00000017053	MSI2	84	77.778	ENSTGUG00000008452	MSI2	100	77.778	Taeniopygia_guttata
ENSPVAG00000017053	MSI2	100	84.642	ENSTRUG00000021248	msi2a	88	84.642	Takifugu_rubripes
ENSPVAG00000017053	MSI2	60	83.051	ENSTBEG00000001241	MSI2	54	83.051	Tupaia_belangeri
ENSPVAG00000017053	MSI2	99	80.252	ENSTTRG00000002189	MSI2	100	80.252	Tursiops_truncatus
ENSPVAG00000017053	MSI2	100	90.785	ENSUAMG00000000700	MSI2	97	90.785	Ursus_americanus
ENSPVAG00000017053	MSI2	95	83.209	ENSUMAG00000000505	MSI2	95	82.264	Ursus_maritimus
ENSPVAG00000017053	MSI2	62	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSPVAG00000017053	MSI2	99	90.722	ENSVVUG00000011783	MSI2	94	85.531	Vulpes_vulpes
ENSPVAG00000017053	MSI2	84	86.264	ENSXCOG00000006113	msi2a	65	95.580	Xiphophorus_couchianus
ENSPVAG00000017053	MSI2	97	83.796	ENSXMAG00000000608	msi2a	92	84.532	Xiphophorus_maculatus