EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017286 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 88361 bases
Position: chrGeneScaffold_1577:170412-258772
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016309	Upf2	PF04050.14	3.2e-33	1	1
ENSPVAP00000016309	MIF4G	PF02854.19	3.2e-62	1	3
ENSPVAP00000016309	MIF4G	PF02854.19	3.2e-62	2	3
ENSPVAP00000016309	MIF4G	PF02854.19	3.2e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017286	UPF2-201	3819	-	ENSPVAP00000016309	1272 (aa)	-	UPI00018B3CBE

Gene Model

Click here to download ENSPVAG00000017286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017286	UPF2	100	90.181	ENSG00000151461	UPF2	100	90.181	Homo_sapiens
ENSPVAG00000017286	UPF2	99	74.648	ENSAPOG00000015837	UPF2	100	74.491	Acanthochromis_polyacanthus
ENSPVAG00000017286	UPF2	100	91.116	ENSAMEG00000004586	UPF2	100	91.116	Ailuropoda_melanoleuca
ENSPVAG00000017286	UPF2	99	76.347	ENSACIG00000018078	UPF2	100	76.269	Amphilophus_citrinellus
ENSPVAG00000017286	UPF2	100	76.228	ENSAOCG00000016766	UPF2	100	76.306	Amphiprion_ocellaris
ENSPVAG00000017286	UPF2	100	76.306	ENSAPEG00000019084	UPF2	100	76.383	Amphiprion_percula
ENSPVAG00000017286	UPF2	100	76.301	ENSATEG00000021677	UPF2	99	76.342	Anabas_testudineus
ENSPVAG00000017286	UPF2	100	79.969	ENSAPLG00000010287	UPF2	90	83.420	Anas_platyrhynchos
ENSPVAG00000017286	UPF2	100	84.748	ENSACAG00000009259	UPF2	100	84.748	Anolis_carolinensis
ENSPVAG00000017286	UPF2	99	80.440	ENSANAG00000028451	UPF2	99	80.440	Aotus_nancymaae
ENSPVAG00000017286	UPF2	100	74.669	ENSACLG00000012696	UPF2	100	76.539	Astatotilapia_calliptera
ENSPVAG00000017286	UPF2	99	76.190	ENSAMXG00000013700	UPF2	99	76.466	Astyanax_mexicanus
ENSPVAG00000017286	UPF2	100	91.038	ENSBTAG00000000288	UPF2	100	91.038	Bos_taurus
ENSPVAG00000017286	UPF2	100	89.072	ENSCJAG00000020685	UPF2	100	89.474	Callithrix_jacchus
ENSPVAG00000017286	UPF2	100	91.274	ENSCAFG00000004839	UPF2	100	91.274	Canis_familiaris
ENSPVAG00000017286	UPF2	99	88.976	ENSCAFG00020005882	UPF2	100	88.976	Canis_lupus_dingo
ENSPVAG00000017286	UPF2	100	91.116	ENSCHIG00000020359	UPF2	100	91.116	Capra_hircus
ENSPVAG00000017286	UPF2	100	90.094	ENSTSYG00000000935	UPF2	97	100.000	Carlito_syrichta
ENSPVAG00000017286	UPF2	91	81.255	ENSCAPG00000016658	UPF2	95	81.255	Cavia_aperea
ENSPVAG00000017286	UPF2	99	88.273	ENSCPOG00000008809	UPF2	99	87.896	Cavia_porcellus
ENSPVAG00000017286	UPF2	92	98.755	ENSCCAG00000035991	UPF2	97	98.755	Cebus_capucinus
ENSPVAG00000017286	UPF2	100	90.181	ENSCATG00000032679	UPF2	100	90.181	Cercocebus_atys
ENSPVAG00000017286	UPF2	100	89.858	ENSCLAG00000011434	UPF2	100	89.465	Chinchilla_lanigera
ENSPVAG00000017286	UPF2	100	90.259	ENSCSAG00000013372	UPF2	100	90.259	Chlorocebus_sabaeus
ENSPVAG00000017286	UPF2	87	95.367	ENSCHOG00000000422	UPF2	89	94.208	Choloepus_hoffmanni
ENSPVAG00000017286	UPF2	99	85.669	ENSCPBG00000027823	UPF2	100	85.512	Chrysemys_picta_bellii
ENSPVAG00000017286	UPF2	79	44.270	ENSCSAVG00000007772	-	99	43.633	Ciona_savignyi
ENSPVAG00000017286	UPF2	99	84.075	ENSCANG00000040396	UPF2	100	83.962	Colobus_angolensis_palliatus
ENSPVAG00000017286	UPF2	100	89.858	ENSCGRG00001019347	Upf2	100	90.016	Cricetulus_griseus_chok1gshd
ENSPVAG00000017286	UPF2	100	89.858	ENSCGRG00000017993	Upf2	100	90.016	Cricetulus_griseus_crigri
ENSPVAG00000017286	UPF2	91	73.988	ENSCSEG00000003520	UPF2	91	73.820	Cynoglossus_semilaevis
ENSPVAG00000017286	UPF2	99	76.295	ENSCVAG00000006167	UPF2	100	75.824	Cyprinodon_variegatus
ENSPVAG00000017286	UPF2	100	90.959	ENSDNOG00000018160	UPF2	100	90.959	Dasypus_novemcinctus
ENSPVAG00000017286	UPF2	100	89.701	ENSDORG00000002478	Upf2	100	89.858	Dipodomys_ordii
ENSPVAG00000017286	UPF2	82	38.920	FBgn0029992	Upf2	73	43.860	Drosophila_melanogaster
ENSPVAG00000017286	UPF2	66	100.000	ENSETEG00000011583	-	60	100.000	Echinops_telfairi
ENSPVAG00000017286	UPF2	69	56.781	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSPVAG00000017286	UPF2	93	97.840	ENSEASG00005019274	UPF2	100	97.840	Equus_asinus_asinus
ENSPVAG00000017286	UPF2	100	91.116	ENSECAG00000017022	UPF2	100	90.723	Equus_caballus
ENSPVAG00000017286	UPF2	70	100.000	ENSEEUG00000007819	UPF2	70	100.000	Erinaceus_europaeus
ENSPVAG00000017286	UPF2	99	75.391	ENSELUG00000012014	UPF2	100	75.758	Esox_lucius
ENSPVAG00000017286	UPF2	100	99.448	ENSFCAG00000005785	UPF2	92	100.000	Felis_catus
ENSPVAG00000017286	UPF2	100	86.871	ENSFALG00000001889	UPF2	98	86.871	Ficedula_albicollis
ENSPVAG00000017286	UPF2	100	89.387	ENSFDAG00000014348	UPF2	100	89.151	Fukomys_damarensis
ENSPVAG00000017286	UPF2	99	76.661	ENSFHEG00000009826	UPF2	99	76.266	Fundulus_heteroclitus
ENSPVAG00000017286	UPF2	91	75.669	ENSGMOG00000005557	UPF2	91	76.137	Gadus_morhua
ENSPVAG00000017286	UPF2	100	86.724	ENSGALG00000033772	UPF2	100	86.724	Gallus_gallus
ENSPVAG00000017286	UPF2	100	73.422	ENSGAFG00000020867	UPF2	100	75.526	Gambusia_affinis
ENSPVAG00000017286	UPF2	90	77.759	ENSGACG00000001080	UPF2	100	76.034	Gasterosteus_aculeatus
ENSPVAG00000017286	UPF2	100	85.928	ENSGAGG00000002700	UPF2	100	85.928	Gopherus_agassizii
ENSPVAG00000017286	UPF2	100	90.181	ENSGGOG00000001479	UPF2	100	90.181	Gorilla_gorilla
ENSPVAG00000017286	UPF2	100	74.513	ENSHBUG00000004249	UPF2	100	76.503	Haplochromis_burtoni
ENSPVAG00000017286	UPF2	100	89.858	ENSHGLG00000015176	-	100	89.465	Heterocephalus_glaber_female
ENSPVAG00000017286	UPF2	99	79.937	ENSHGLG00000003822	-	99	79.072	Heterocephalus_glaber_female
ENSPVAG00000017286	UPF2	99	87.244	ENSHGLG00100010036	UPF2	100	86.142	Heterocephalus_glaber_male
ENSPVAG00000017286	UPF2	100	74.321	ENSHCOG00000004025	UPF2	99	74.321	Hippocampus_comes
ENSPVAG00000017286	UPF2	100	74.903	ENSIPUG00000015524	UPF2	100	75.351	Ictalurus_punctatus
ENSPVAG00000017286	UPF2	100	90.252	ENSSTOG00000013075	UPF2	100	90.409	Ictidomys_tridecemlineatus
ENSPVAG00000017286	UPF2	100	88.522	ENSJJAG00000004913	Upf2	100	88.365	Jaculus_jaculus
ENSPVAG00000017286	UPF2	92	77.551	ENSKMAG00000001071	UPF2	92	77.513	Kryptolebias_marmoratus
ENSPVAG00000017286	UPF2	80	74.092	ENSLBEG00000000728	-	93	74.190	Labrus_bergylta
ENSPVAG00000017286	UPF2	100	76.475	ENSLBEG00000016394	-	99	76.516	Labrus_bergylta
ENSPVAG00000017286	UPF2	99	73.668	ENSLACG00000015945	UPF2	100	73.589	Latimeria_chalumnae
ENSPVAG00000017286	UPF2	99	79.528	ENSLOCG00000015698	UPF2	100	79.291	Lepisosteus_oculatus
ENSPVAG00000017286	UPF2	100	90.102	ENSMFAG00000043865	UPF2	100	90.102	Macaca_fascicularis
ENSPVAG00000017286	UPF2	100	90.102	ENSMMUG00000008241	UPF2	100	90.102	Macaca_mulatta
ENSPVAG00000017286	UPF2	81	87.914	ENSMNEG00000008062	UPF2	99	88.160	Macaca_nemestrina
ENSPVAG00000017286	UPF2	95	98.554	ENSMLEG00000036120	UPF2	100	98.792	Mandrillus_leucophaeus
ENSPVAG00000017286	UPF2	100	75.991	ENSMAMG00000018276	UPF2	100	76.109	Mastacembelus_armatus
ENSPVAG00000017286	UPF2	100	74.669	ENSMZEG00005021595	UPF2	100	76.539	Maylandia_zebra
ENSPVAG00000017286	UPF2	99	86.006	ENSMGAG00000004573	UPF2	99	86.006	Meleagris_gallopavo
ENSPVAG00000017286	UPF2	100	87.736	ENSMAUG00000016512	Upf2	100	87.736	Mesocricetus_auratus
ENSPVAG00000017286	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.487	Microcebus_murinus
ENSPVAG00000017286	UPF2	100	88.836	ENSMOCG00000008263	Upf2	100	89.072	Microtus_ochrogaster
ENSPVAG00000017286	UPF2	90	75.478	ENSMMOG00000006528	UPF2	100	72.812	Mola_mola
ENSPVAG00000017286	UPF2	100	88.443	ENSMODG00000016794	UPF2	100	88.443	Monodelphis_domestica
ENSPVAG00000017286	UPF2	99	75.781	ENSMALG00000002663	UPF2	100	75.743	Monopterus_albus
ENSPVAG00000017286	UPF2	100	89.387	MGP_CAROLIEiJ_G0023157	Upf2	100	97.714	Mus_caroli
ENSPVAG00000017286	UPF2	100	89.623	ENSMUSG00000043241	Upf2	99	97.524	Mus_musculus
ENSPVAG00000017286	UPF2	100	89.465	MGP_PahariEiJ_G0019217	Upf2	100	97.524	Mus_pahari
ENSPVAG00000017286	UPF2	100	89.858	MGP_SPRETEiJ_G0024075	Upf2	100	97.524	Mus_spretus
ENSPVAG00000017286	UPF2	100	91.195	ENSMPUG00000001064	UPF2	100	91.195	Mustela_putorius_furo
ENSPVAG00000017286	UPF2	99	91.202	ENSMLUG00000000228	UPF2	100	91.202	Myotis_lucifugus
ENSPVAG00000017286	UPF2	100	74.669	ENSNBRG00000013629	UPF2	100	76.539	Neolamprologus_brichardi
ENSPVAG00000017286	UPF2	100	90.024	ENSNLEG00000012058	UPF2	100	90.024	Nomascus_leucogenys
ENSPVAG00000017286	UPF2	51	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSPVAG00000017286	UPF2	82	100.000	ENSOPRG00000006801	-	82	100.000	Ochotona_princeps
ENSPVAG00000017286	UPF2	100	89.701	ENSODEG00000001290	UPF2	100	89.308	Octodon_degus
ENSPVAG00000017286	UPF2	100	74.747	ENSONIG00000017991	UPF2	100	76.617	Oreochromis_niloticus
ENSPVAG00000017286	UPF2	99	88.567	ENSOCUG00000006230	UPF2	100	89.115	Oryctolagus_cuniculus
ENSPVAG00000017286	UPF2	100	75.272	ENSORLG00000017189	UPF2	100	75.760	Oryzias_latipes
ENSPVAG00000017286	UPF2	100	75.272	ENSORLG00020005969	UPF2	100	75.682	Oryzias_latipes_hni
ENSPVAG00000017286	UPF2	100	75.272	ENSORLG00015005713	UPF2	100	75.682	Oryzias_latipes_hsok
ENSPVAG00000017286	UPF2	99	71.863	ENSOMEG00000023420	UPF2	98	72.578	Oryzias_melastigma
ENSPVAG00000017286	UPF2	100	89.937	ENSOGAG00000005796	UPF2	100	89.937	Otolemur_garnettii
ENSPVAG00000017286	UPF2	100	90.973	ENSOARG00000014587	UPF2	100	90.973	Ovis_aries
ENSPVAG00000017286	UPF2	99	86.484	ENSPPAG00000037953	UPF2	100	86.467	Pan_paniscus
ENSPVAG00000017286	UPF2	100	91.116	ENSPPRG00000000690	UPF2	100	91.116	Panthera_pardus
ENSPVAG00000017286	UPF2	100	91.116	ENSPTIG00000008867	UPF2	100	91.116	Panthera_tigris_altaica
ENSPVAG00000017286	UPF2	100	90.181	ENSPTRG00000002291	UPF2	100	90.181	Pan_troglodytes
ENSPVAG00000017286	UPF2	100	90.102	ENSPANG00000023399	UPF2	100	90.102	Papio_anubis
ENSPVAG00000017286	UPF2	100	74.201	ENSPKIG00000025502	UPF2	100	74.903	Paramormyrops_kingsleyae
ENSPVAG00000017286	UPF2	59	79.973	ENSPSIG00000015158	UPF2	95	79.973	Pelodiscus_sinensis
ENSPVAG00000017286	UPF2	99	73.626	ENSPMGG00000005259	UPF2	100	74.647	Periophthalmus_magnuspinnatus
ENSPVAG00000017286	UPF2	93	95.918	ENSPEMG00000015731	Upf2	99	95.918	Peromyscus_maniculatus_bairdii
ENSPVAG00000017286	UPF2	100	88.129	ENSPCIG00000006656	UPF2	100	88.129	Phascolarctos_cinereus
ENSPVAG00000017286	UPF2	100	73.655	ENSPFOG00000017118	UPF2	100	75.760	Poecilia_formosa
ENSPVAG00000017286	UPF2	100	73.655	ENSPLAG00000005094	UPF2	100	75.760	Poecilia_latipinna
ENSPVAG00000017286	UPF2	100	73.655	ENSPMEG00000017009	UPF2	100	75.760	Poecilia_mexicana
ENSPVAG00000017286	UPF2	99	73.709	ENSPREG00000021880	UPF2	100	76.056	Poecilia_reticulata
ENSPVAG00000017286	UPF2	66	89.354	ENSPPYG00000002089	-	100	89.354	Pongo_abelii
ENSPVAG00000017286	UPF2	89	95.021	ENSPCAG00000000684	UPF2	89	95.021	Procavia_capensis
ENSPVAG00000017286	UPF2	99	87.008	ENSPCOG00000021656	UPF2	100	87.323	Propithecus_coquereli
ENSPVAG00000017286	UPF2	99	72.209	ENSPNYG00000017096	UPF2	100	74.083	Pundamilia_nyererei
ENSPVAG00000017286	UPF2	100	76.617	ENSPNAG00000009357	UPF2	100	77.007	Pygocentrus_nattereri
ENSPVAG00000017286	UPF2	99	83.922	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSPVAG00000017286	UPF2	99	88.819	ENSRBIG00000037780	UPF2	100	88.976	Rhinopithecus_bieti
ENSPVAG00000017286	UPF2	100	89.788	ENSRROG00000043547	UPF2	100	89.945	Rhinopithecus_roxellana
ENSPVAG00000017286	UPF2	100	89.552	ENSSBOG00000020012	UPF2	100	89.317	Saimiri_boliviensis_boliviensis
ENSPVAG00000017286	UPF2	100	74.766	ENSSFOG00015023788	upf2	100	76.324	Scleropages_formosus
ENSPVAG00000017286	UPF2	87	84.964	ENSSMAG00000007637	UPF2	93	84.783	Scophthalmus_maximus
ENSPVAG00000017286	UPF2	100	76.558	ENSSDUG00000017244	UPF2	99	76.617	Seriola_dumerili
ENSPVAG00000017286	UPF2	99	74.668	ENSSLDG00000016866	UPF2	100	74.883	Seriola_lalandi_dorsalis
ENSPVAG00000017286	UPF2	100	88.365	ENSSARG00000008615	UPF2	100	88.365	Sorex_araneus
ENSPVAG00000017286	UPF2	99	84.343	ENSSPUG00000014544	UPF2	99	84.343	Sphenodon_punctatus
ENSPVAG00000017286	UPF2	68	89.758	ENSSSCG00000011117	-	100	89.758	Sus_scrofa
ENSPVAG00000017286	UPF2	99	86.998	ENSTGUG00000002163	-	100	86.998	Taeniopygia_guttata
ENSPVAG00000017286	UPF2	100	75.642	ENSTRUG00000007519	UPF2	99	75.604	Takifugu_rubripes
ENSPVAG00000017286	UPF2	100	73.427	ENSTNIG00000004453	UPF2	100	73.074	Tetraodon_nigroviridis
ENSPVAG00000017286	UPF2	93	81.895	ENSTBEG00000012679	UPF2	93	82.064	Tupaia_belangeri
ENSPVAG00000017286	UPF2	100	90.723	ENSTTRG00000016388	UPF2	100	90.802	Tursiops_truncatus
ENSPVAG00000017286	UPF2	92	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSPVAG00000017286	UPF2	100	91.274	ENSUMAG00000012953	UPF2	95	91.274	Ursus_maritimus
ENSPVAG00000017286	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSPVAG00000017286	UPF2	100	91.195	ENSVVUG00000006166	UPF2	100	91.195	Vulpes_vulpes
ENSPVAG00000017286	UPF2	100	76.498	ENSXETG00000033103	UPF2	100	74.408	Xenopus_tropicalis
ENSPVAG00000017286	UPF2	99	73.380	ENSXCOG00000011604	UPF2	100	75.488	Xiphophorus_couchianus
ENSPVAG00000017286	UPF2	100	73.578	ENSXMAG00000017209	UPF2	100	75.526	Xiphophorus_maculatus