EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000017347 (Gene tree)
Gene ID: -
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 17894 bases
Position: chrGeneScaffold_508:299334-317227
Accession: 20084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016367	DBP10CT	PF08147.12	2.6e-11	1	1
ENSPVAP00000016367	ResIII	PF04851.15	1.5e-07	1	1
ENSPVAP00000016367	DEAD	PF00270.29	3.2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017347	DDX54-201	2631	-	ENSPVAP00000016367	876 (aa)	-	UPI00018B39D8

Gene Model

Click here to download ENSPVAG00000017347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000017347	DDX54	52	34.375	ENSPVAG00000006823	DDX18	53	40.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017347	DDX54	100	76.844	ENSG00000123064	DDX54	100	93.750	Homo_sapiens
ENSPVAG00000017347	DDX54	89	79.928	ENSAPOG00000008602	ddx54	91	81.061	Acanthochromis_polyacanthus
ENSPVAG00000017347	DDX54	97	78.195	ENSAMEG00000008775	DDX54	89	95.367	Ailuropoda_melanoleuca
ENSPVAG00000017347	DDX54	89	81.579	ENSACIG00000019104	ddx54	90	84.190	Amphilophus_citrinellus
ENSPVAG00000017347	DDX54	89	79.570	ENSAOCG00000008449	ddx54	91	80.682	Amphiprion_ocellaris
ENSPVAG00000017347	DDX54	89	79.570	ENSAPEG00000014287	ddx54	91	80.682	Amphiprion_percula
ENSPVAG00000017347	DDX54	88	82.213	ENSATEG00000018529	ddx54	90	82.213	Anabas_testudineus
ENSPVAG00000017347	DDX54	86	85.776	ENSAPLG00000013191	DDX54	92	85.776	Anas_platyrhynchos
ENSPVAG00000017347	DDX54	87	85.062	ENSACAG00000004703	DDX54	90	85.062	Anolis_carolinensis
ENSPVAG00000017347	DDX54	88	68.638	ENSANAG00000032241	-	95	67.797	Aotus_nancymaae
ENSPVAG00000017347	DDX54	93	78.585	ENSANAG00000032761	-	92	78.203	Aotus_nancymaae
ENSPVAG00000017347	DDX54	91	80.287	ENSACLG00000013176	ddx54	91	81.439	Astatotilapia_calliptera
ENSPVAG00000017347	DDX54	88	81.176	ENSAMXG00000009189	ddx54	90	81.176	Astyanax_mexicanus
ENSPVAG00000017347	DDX54	100	77.993	ENSBTAG00000011930	DDX54	88	93.127	Bos_taurus
ENSPVAG00000017347	DDX54	79	64.516	WBGene00022378	Y94H6A.5	84	64.516	Caenorhabditis_elegans
ENSPVAG00000017347	DDX54	93	76.225	ENSCJAG00000010039	DDX54	81	91.409	Callithrix_jacchus
ENSPVAG00000017347	DDX54	59	78.776	ENSCAFG00000009029	DDX54	91	78.967	Canis_familiaris
ENSPVAG00000017347	DDX54	100	77.702	ENSCAFG00020017643	DDX54	93	92.784	Canis_lupus_dingo
ENSPVAG00000017347	DDX54	100	77.019	ENSCHIG00000026798	DDX54	93	88.660	Capra_hircus
ENSPVAG00000017347	DDX54	91	77.524	ENSTSYG00000007898	DDX54	92	77.524	Carlito_syrichta
ENSPVAG00000017347	DDX54	93	74.419	ENSCAPG00000001482	DDX54	88	95.259	Cavia_aperea
ENSPVAG00000017347	DDX54	100	76.504	ENSCPOG00000020649	DDX54	93	92.096	Cavia_porcellus
ENSPVAG00000017347	DDX54	100	77.702	ENSCCAG00000022625	DDX54	93	92.440	Cebus_capucinus
ENSPVAG00000017347	DDX54	100	76.304	ENSCATG00000041943	DDX54	93	93.127	Cercocebus_atys
ENSPVAG00000017347	DDX54	100	74.315	ENSCLAG00000010748	DDX54	92	85.911	Chinchilla_lanigera
ENSPVAG00000017347	DDX54	96	72.770	ENSCSAG00000002432	DDX54	86	85.827	Chlorocebus_sabaeus
ENSPVAG00000017347	DDX54	68	88.889	ENSCPBG00000017982	DDX54	76	88.889	Chrysemys_picta_bellii
ENSPVAG00000017347	DDX54	82	63.672	ENSCING00000004789	-	90	63.672	Ciona_intestinalis
ENSPVAG00000017347	DDX54	80	72.936	ENSCSAVG00000008916	-	89	75.500	Ciona_savignyi
ENSPVAG00000017347	DDX54	86	93.991	ENSCANG00000020637	DDX54	100	93.991	Colobus_angolensis_palliatus
ENSPVAG00000017347	DDX54	100	75.371	ENSCGRG00001014803	Ddx54	93	89.347	Cricetulus_griseus_chok1gshd
ENSPVAG00000017347	DDX54	100	75.085	ENSCGRG00000002827	Ddx54	93	89.003	Cricetulus_griseus_crigri
ENSPVAG00000017347	DDX54	89	77.778	ENSCSEG00000016462	ddx54	91	78.788	Cynoglossus_semilaevis
ENSPVAG00000017347	DDX54	89	79.323	ENSCVAG00000022404	ddx54	91	79.545	Cyprinodon_variegatus
ENSPVAG00000017347	DDX54	88	81.496	ENSDARG00000105286	ddx54	90	81.496	Danio_rerio
ENSPVAG00000017347	DDX54	100	75.941	ENSDNOG00000032913	DDX54	93	89.347	Dasypus_novemcinctus
ENSPVAG00000017347	DDX54	80	70.100	ENSDORG00000003399	Ddx54	86	78.070	Dipodomys_ordii
ENSPVAG00000017347	DDX54	71	71.939	FBgn0052344	CG32344	80	65.198	Drosophila_melanogaster
ENSPVAG00000017347	DDX54	68	67.384	ENSEBUG00000008886	ddx54	83	71.264	Eptatretus_burgeri
ENSPVAG00000017347	DDX54	100	68.722	ENSEASG00005009501	DDX54	92	93.464	Equus_asinus_asinus
ENSPVAG00000017347	DDX54	100	77.955	ENSECAG00000012890	DDX54	93	94.845	Equus_caballus
ENSPVAG00000017347	DDX54	55	96.203	ENSEEUG00000008296	-	54	96.203	Erinaceus_europaeus
ENSPVAG00000017347	DDX54	88	81.712	ENSELUG00000013533	ddx54	90	81.712	Esox_lucius
ENSPVAG00000017347	DDX54	100	76.853	ENSFCAG00000027806	DDX54	93	93.471	Felis_catus
ENSPVAG00000017347	DDX54	83	90.385	ENSFALG00000007737	DDX54	92	90.385	Ficedula_albicollis
ENSPVAG00000017347	DDX54	92	76.304	ENSFDAG00000019953	DDX54	92	89.003	Fukomys_damarensis
ENSPVAG00000017347	DDX54	89	78.947	ENSFHEG00000018425	ddx54	91	79.468	Fundulus_heteroclitus
ENSPVAG00000017347	DDX54	87	75.090	ENSGMOG00000011746	ddx54	87	84.483	Gadus_morhua
ENSPVAG00000017347	DDX54	86	86.207	ENSGALG00000007490	DDX54	89	86.207	Gallus_gallus
ENSPVAG00000017347	DDX54	88	82.609	ENSGAFG00000010336	ddx54	89	82.609	Gambusia_affinis
ENSPVAG00000017347	DDX54	86	84.052	ENSGACG00000016793	ddx54	90	78.656	Gasterosteus_aculeatus
ENSPVAG00000017347	DDX54	84	91.163	ENSGAGG00000022803	DDX54	92	91.163	Gopherus_agassizii
ENSPVAG00000017347	DDX54	100	76.644	ENSGGOG00000010414	DDX54	93	92.784	Gorilla_gorilla
ENSPVAG00000017347	DDX54	100	75.713	ENSHGLG00000014411	DDX54	93	91.065	Heterocephalus_glaber_female
ENSPVAG00000017347	DDX54	100	75.799	ENSHGLG00100018511	DDX54	93	91.065	Heterocephalus_glaber_male
ENSPVAG00000017347	DDX54	88	80.156	ENSHCOG00000019287	ddx54	90	80.156	Hippocampus_comes
ENSPVAG00000017347	DDX54	88	81.961	ENSIPUG00000015556	Ddx54	93	81.961	Ictalurus_punctatus
ENSPVAG00000017347	DDX54	87	75.194	ENSSTOG00000004068	DDX54	100	75.452	Ictidomys_tridecemlineatus
ENSPVAG00000017347	DDX54	99	75.289	ENSJJAG00000015712	Ddx54	93	90.378	Jaculus_jaculus
ENSPVAG00000017347	DDX54	91	78.058	ENSKMAG00000017520	ddx54	91	79.087	Kryptolebias_marmoratus
ENSPVAG00000017347	DDX54	88	80.078	ENSLBEG00000019480	ddx54	90	80.078	Labrus_bergylta
ENSPVAG00000017347	DDX54	86	81.323	ENSLACG00000008944	DDX54	88	81.323	Latimeria_chalumnae
ENSPVAG00000017347	DDX54	89	81.439	ENSLOCG00000008485	ddx54	91	81.439	Lepisosteus_oculatus
ENSPVAG00000017347	DDX54	80	83.069	ENSLAFG00000027782	DDX54	91	83.069	Loxodonta_africana
ENSPVAG00000017347	DDX54	100	76.670	ENSMFAG00000043636	DDX54	93	93.471	Macaca_fascicularis
ENSPVAG00000017347	DDX54	100	75.113	ENSMMUG00000021795	DDX54	93	93.471	Macaca_mulatta
ENSPVAG00000017347	DDX54	93	85.911	ENSMNEG00000043605	DDX54	93	85.911	Macaca_nemestrina
ENSPVAG00000017347	DDX54	88	88.672	ENSMLEG00000038981	DDX54	89	88.672	Mandrillus_leucophaeus
ENSPVAG00000017347	DDX54	89	80.827	ENSMAMG00000012784	ddx54	90	83.203	Mastacembelus_armatus
ENSPVAG00000017347	DDX54	91	80.287	ENSMZEG00005018773	ddx54	90	81.439	Maylandia_zebra
ENSPVAG00000017347	DDX54	85	85.965	ENSMGAG00000009183	DDX54	92	85.965	Meleagris_gallopavo
ENSPVAG00000017347	DDX54	93	89.003	ENSMAUG00000011051	Ddx54	93	88.660	Mesocricetus_auratus
ENSPVAG00000017347	DDX54	100	76.397	ENSMICG00000012217	DDX54	93	92.096	Microcebus_murinus
ENSPVAG00000017347	DDX54	100	75.941	ENSMOCG00000010835	Ddx54	93	89.347	Microtus_ochrogaster
ENSPVAG00000017347	DDX54	87	77.358	ENSMMOG00000009634	ddx54	90	79.688	Mola_mola
ENSPVAG00000017347	DDX54	88	86.345	ENSMODG00000003413	DDX54	91	86.694	Monodelphis_domestica
ENSPVAG00000017347	DDX54	88	82.422	ENSMALG00000022098	ddx54	91	82.422	Monopterus_albus
ENSPVAG00000017347	DDX54	100	73.660	MGP_CAROLIEiJ_G0027665	Ddx54	93	87.629	Mus_caroli
ENSPVAG00000017347	DDX54	100	73.265	ENSMUSG00000029599	Ddx54	93	87.973	Mus_musculus
ENSPVAG00000017347	DDX54	100	73.948	MGP_PahariEiJ_G0024247	Ddx54	93	87.973	Mus_pahari
ENSPVAG00000017347	DDX54	100	73.151	MGP_SPRETEiJ_G0028665	Ddx54	93	87.973	Mus_spretus
ENSPVAG00000017347	DDX54	100	77.247	ENSMPUG00000002574	DDX54	93	92.784	Mustela_putorius_furo
ENSPVAG00000017347	DDX54	100	74.205	ENSNGAG00000021313	Ddx54	93	90.722	Nannospalax_galili
ENSPVAG00000017347	DDX54	56	80.287	ENSNBRG00000005588	ddx54	61	81.439	Neolamprologus_brichardi
ENSPVAG00000017347	DDX54	100	76.538	ENSNLEG00000000162	DDX54	93	92.440	Nomascus_leucogenys
ENSPVAG00000017347	DDX54	73	93.651	ENSMEUG00000015392	DDX54	88	93.651	Notamacropus_eugenii
ENSPVAG00000017347	DDX54	83	92.169	ENSOPRG00000012000	DDX54	85	92.169	Ochotona_princeps
ENSPVAG00000017347	DDX54	100	72.717	ENSODEG00000014863	DDX54	93	82.818	Octodon_degus
ENSPVAG00000017347	DDX54	100	74.490	ENSOCUG00000008932	DDX54	93	87.629	Oryctolagus_cuniculus
ENSPVAG00000017347	DDX54	91	78.777	ENSORLG00000007385	ddx54	90	81.853	Oryzias_latipes
ENSPVAG00000017347	DDX54	91	79.137	ENSORLG00020000858	ddx54	90	82.239	Oryzias_latipes_hni
ENSPVAG00000017347	DDX54	91	79.137	ENSORLG00015006956	ddx54	90	82.239	Oryzias_latipes_hsok
ENSPVAG00000017347	DDX54	86	82.375	ENSOMEG00000003663	ddx54	91	82.375	Oryzias_melastigma
ENSPVAG00000017347	DDX54	100	76.538	ENSOGAG00000004210	DDX54	93	94.158	Otolemur_garnettii
ENSPVAG00000017347	DDX54	100	78.018	ENSOARG00000008363	DDX54	93	93.471	Ovis_aries
ENSPVAG00000017347	DDX54	100	75.367	ENSPPAG00000042178	DDX54	93	92.784	Pan_paniscus
ENSPVAG00000017347	DDX54	92	93.448	ENSPPRG00000005223	DDX54	93	93.448	Panthera_pardus
ENSPVAG00000017347	DDX54	61	93.966	ENSPTIG00000019728	DDX54	80	93.966	Panthera_tigris_altaica
ENSPVAG00000017347	DDX54	100	76.077	ENSPTRG00000005483	DDX54	93	92.784	Pan_troglodytes
ENSPVAG00000017347	DDX54	100	74.774	ENSPANG00000008883	DDX54	93	93.471	Papio_anubis
ENSPVAG00000017347	DDX54	88	83.004	ENSPKIG00000018272	ddx54	88	82.609	Paramormyrops_kingsleyae
ENSPVAG00000017347	DDX54	86	87.336	ENSPMGG00000010988	ddx54	91	87.336	Periophthalmus_magnuspinnatus
ENSPVAG00000017347	DDX54	100	76.169	ENSPEMG00000016701	Ddx54	93	89.691	Peromyscus_maniculatus_bairdii
ENSPVAG00000017347	DDX54	91	79.286	ENSPFOG00000019822	ddx54	90	83.203	Poecilia_formosa
ENSPVAG00000017347	DDX54	91	78.136	ENSPLAG00000004530	ddx54	90	81.641	Poecilia_latipinna
ENSPVAG00000017347	DDX54	91	77.778	ENSPMEG00000010803	ddx54	90	81.250	Poecilia_mexicana
ENSPVAG00000017347	DDX54	88	81.641	ENSPREG00000014372	ddx54	90	81.641	Poecilia_reticulata
ENSPVAG00000017347	DDX54	100	76.444	ENSPPYG00000004984	DDX54	93	93.471	Pongo_abelii
ENSPVAG00000017347	DDX54	93	93.471	ENSPCAG00000008462	DDX54	93	93.471	Procavia_capensis
ENSPVAG00000017347	DDX54	100	77.221	ENSPCOG00000006050	DDX54	93	92.784	Propithecus_coquereli
ENSPVAG00000017347	DDX54	80	82.745	ENSPNAG00000014459	ddx54	86	82.745	Pygocentrus_nattereri
ENSPVAG00000017347	DDX54	100	73.666	ENSRNOG00000001377	Ddx54	89	89.003	Rattus_norvegicus
ENSPVAG00000017347	DDX54	100	75.452	ENSRBIG00000032535	DDX54	93	91.065	Rhinopithecus_bieti
ENSPVAG00000017347	DDX54	92	82.292	ENSRROG00000029557	DDX54	94	82.292	Rhinopithecus_roxellana
ENSPVAG00000017347	DDX54	53	57.727	YDL031W	-	54	51.301	Saccharomyces_cerevisiae
ENSPVAG00000017347	DDX54	100	77.588	ENSSBOG00000028194	DDX54	93	91.753	Saimiri_boliviensis_boliviensis
ENSPVAG00000017347	DDX54	75	91.026	ENSSHAG00000015646	DDX54	82	91.026	Sarcophilus_harrisii
ENSPVAG00000017347	DDX54	87	84.553	ENSSFOG00015014981	ddx54	88	84.553	Scleropages_formosus
ENSPVAG00000017347	DDX54	86	78.599	ENSSMAG00000003210	ddx54	90	78.599	Scophthalmus_maximus
ENSPVAG00000017347	DDX54	86	80.545	ENSSDUG00000004474	ddx54	90	80.545	Seriola_dumerili
ENSPVAG00000017347	DDX54	89	77.061	ENSSLDG00000010380	ddx54	90	79.767	Seriola_lalandi_dorsalis
ENSPVAG00000017347	DDX54	88	84.000	ENSSPUG00000014141	DDX54	88	84.000	Sphenodon_punctatus
ENSPVAG00000017347	DDX54	83	79.565	ENSSPAG00000022918	ddx54	89	79.565	Stegastes_partitus
ENSPVAG00000017347	DDX54	93	93.127	ENSSSCG00000009876	DDX54	93	93.127	Sus_scrofa
ENSPVAG00000017347	DDX54	84	86.175	ENSTGUG00000009126	DDX54	92	86.175	Taeniopygia_guttata
ENSPVAG00000017347	DDX54	88	81.423	ENSTRUG00000014939	ddx54	90	81.423	Takifugu_rubripes
ENSPVAG00000017347	DDX54	88	83.200	ENSTNIG00000009037	ddx54	90	82.213	Tetraodon_nigroviridis
ENSPVAG00000017347	DDX54	69	83.333	ENSTBEG00000003783	DDX54	74	82.895	Tupaia_belangeri
ENSPVAG00000017347	DDX54	100	76.304	ENSTTRG00000016678	DDX54	93	86.942	Tursiops_truncatus
ENSPVAG00000017347	DDX54	100	78.231	ENSUAMG00000028387	DDX54	93	94.502	Ursus_americanus
ENSPVAG00000017347	DDX54	75	95.370	ENSUMAG00000010245	DDX54	89	95.370	Ursus_maritimus
ENSPVAG00000017347	DDX54	100	77.929	ENSVVUG00000010212	DDX54	93	93.127	Vulpes_vulpes
ENSPVAG00000017347	DDX54	91	78.853	ENSXETG00000016410	ddx54	88	90.308	Xenopus_tropicalis
ENSPVAG00000017347	DDX54	88	81.818	ENSXCOG00000002909	ddx54	89	81.818	Xiphophorus_couchianus
ENSPVAG00000017347	DDX54	88	81.818	ENSXMAG00000005312	ddx54	90	81.818	Xiphophorus_maculatus