EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017430 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 18282 bases
Position: chrGeneScaffold_2409:266075-284356
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016442	TRM13	PF05206.14	7.2e-92	1	1
ENSPVAP00000016442	zf-U11-48K	PF05253.12	1.7e-09	1	1
ENSPVAP00000016442	zf-TRM13_CCCH	PF11722.8	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017430	TRMT13-201	1446	-	ENSPVAP00000016442	481 (aa)	-	UPI00018B3771

Gene Model

Click here to download ENSPVAG00000017430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017430	TRMT13	100	91.892	ENSG00000122435	TRMT13	100	91.892	Homo_sapiens
ENSPVAG00000017430	TRMT13	95	48.096	ENSAPOG00000015131	trmt13	99	48.497	Acanthochromis_polyacanthus
ENSPVAG00000017430	TRMT13	100	91.684	ENSAMEG00000008917	TRMT13	100	91.684	Ailuropoda_melanoleuca
ENSPVAG00000017430	TRMT13	95	51.380	ENSACIG00000005804	trmt13	97	50.208	Amphilophus_citrinellus
ENSPVAG00000017430	TRMT13	95	49.296	ENSAOCG00000023585	trmt13	99	49.296	Amphiprion_ocellaris
ENSPVAG00000017430	TRMT13	95	48.611	ENSAPEG00000004025	trmt13	99	48.611	Amphiprion_percula
ENSPVAG00000017430	TRMT13	99	50.716	ENSATEG00000006597	trmt13	99	50.305	Anabas_testudineus
ENSPVAG00000017430	TRMT13	89	67.517	ENSAPLG00000014924	TRMT13	99	67.517	Anas_platyrhynchos
ENSPVAG00000017430	TRMT13	96	65.086	ENSACAG00000003498	TRMT13	98	65.086	Anolis_carolinensis
ENSPVAG00000017430	TRMT13	100	91.892	ENSANAG00000019525	TRMT13	100	91.892	Aotus_nancymaae
ENSPVAG00000017430	TRMT13	96	52.966	ENSACLG00000020018	trmt13	99	52.966	Astatotilapia_calliptera
ENSPVAG00000017430	TRMT13	95	53.648	ENSAMXG00000017963	trmt13	97	53.863	Astyanax_mexicanus
ENSPVAG00000017430	TRMT13	100	91.268	ENSBTAG00000015781	TRMT13	100	91.268	Bos_taurus
ENSPVAG00000017430	TRMT13	100	90.021	ENSCJAG00000000200	TRMT13	100	90.021	Callithrix_jacchus
ENSPVAG00000017430	TRMT13	65	94.268	ENSCAFG00000020021	TRMT13	99	94.268	Canis_familiaris
ENSPVAG00000017430	TRMT13	57	93.773	ENSCAFG00020011572	TRMT13	95	93.091	Canis_lupus_dingo
ENSPVAG00000017430	TRMT13	100	91.892	ENSCHIG00000015395	TRMT13	100	91.892	Capra_hircus
ENSPVAG00000017430	TRMT13	98	80.761	ENSTSYG00000010811	TRMT13	96	87.629	Carlito_syrichta
ENSPVAG00000017430	TRMT13	75	69.041	ENSCAPG00000009085	TRMT13	100	69.589	Cavia_aperea
ENSPVAG00000017430	TRMT13	100	89.397	ENSCPOG00000000694	TRMT13	100	89.397	Cavia_porcellus
ENSPVAG00000017430	TRMT13	100	91.892	ENSCCAG00000023772	TRMT13	100	91.892	Cebus_capucinus
ENSPVAG00000017430	TRMT13	100	91.684	ENSCATG00000033556	TRMT13	100	91.684	Cercocebus_atys
ENSPVAG00000017430	TRMT13	89	82.904	ENSCLAG00000008220	TRMT13	100	83.607	Chinchilla_lanigera
ENSPVAG00000017430	TRMT13	100	91.892	ENSCSAG00000001506	TRMT13	100	91.892	Chlorocebus_sabaeus
ENSPVAG00000017430	TRMT13	99	69.167	ENSCPBG00000026671	TRMT13	99	69.167	Chrysemys_picta_bellii
ENSPVAG00000017430	TRMT13	100	92.100	ENSCANG00000034659	TRMT13	100	92.100	Colobus_angolensis_palliatus
ENSPVAG00000017430	TRMT13	99	85.447	ENSCGRG00001021601	Trmt13	99	85.447	Cricetulus_griseus_chok1gshd
ENSPVAG00000017430	TRMT13	53	83.268	ENSCGRG00000000093	-	99	83.268	Cricetulus_griseus_crigri
ENSPVAG00000017430	TRMT13	96	48.298	ENSCSEG00000000591	trmt13	99	48.298	Cynoglossus_semilaevis
ENSPVAG00000017430	TRMT13	95	49.582	ENSCVAG00000017342	trmt13	93	49.372	Cyprinodon_variegatus
ENSPVAG00000017430	TRMT13	95	56.897	ENSDARG00000102846	trmt13	96	56.897	Danio_rerio
ENSPVAG00000017430	TRMT13	57	89.493	ENSDNOG00000001710	TRMT13	84	89.493	Dasypus_novemcinctus
ENSPVAG00000017430	TRMT13	99	87.292	ENSDORG00000015808	Trmt13	99	87.292	Dipodomys_ordii
ENSPVAG00000017430	TRMT13	97	31.263	FBgn0037435	CG18048	96	31.263	Drosophila_melanogaster
ENSPVAG00000017430	TRMT13	99	76.200	ENSETEG00000005819	TRMT13	99	76.200	Echinops_telfairi
ENSPVAG00000017430	TRMT13	95	46.137	ENSEBUG00000014444	trmt13	96	46.220	Eptatretus_burgeri
ENSPVAG00000017430	TRMT13	100	95.010	ENSEASG00005015918	TRMT13	100	95.010	Equus_asinus_asinus
ENSPVAG00000017430	TRMT13	100	94.802	ENSECAG00000022626	TRMT13	100	94.802	Equus_caballus
ENSPVAG00000017430	TRMT13	78	81.470	ENSEEUG00000000294	TRMT13	79	81.470	Erinaceus_europaeus
ENSPVAG00000017430	TRMT13	98	55.158	ENSELUG00000003803	trmt13	99	55.158	Esox_lucius
ENSPVAG00000017430	TRMT13	100	92.516	ENSFCAG00000030618	TRMT13	100	92.516	Felis_catus
ENSPVAG00000017430	TRMT13	99	65.900	ENSFALG00000002424	TRMT13	99	65.900	Ficedula_albicollis
ENSPVAG00000017430	TRMT13	99	89.895	ENSFDAG00000006342	TRMT13	98	89.895	Fukomys_damarensis
ENSPVAG00000017430	TRMT13	77	51.958	ENSFHEG00000022954	trmt13	97	51.000	Fundulus_heteroclitus
ENSPVAG00000017430	TRMT13	95	47.912	ENSGMOG00000013223	trmt13	100	48.352	Gadus_morhua
ENSPVAG00000017430	TRMT13	96	65.451	ENSGALG00000005290	TRMT13	99	64.315	Gallus_gallus
ENSPVAG00000017430	TRMT13	75	50.667	ENSGAFG00000001577	trmt13	81	50.667	Gambusia_affinis
ENSPVAG00000017430	TRMT13	95	50.323	ENSGACG00000013428	trmt13	97	50.968	Gasterosteus_aculeatus
ENSPVAG00000017430	TRMT13	100	69.710	ENSGAGG00000023303	TRMT13	99	74.182	Gopherus_agassizii
ENSPVAG00000017430	TRMT13	100	91.684	ENSGGOG00000005616	TRMT13	100	91.684	Gorilla_gorilla
ENSPVAG00000017430	TRMT13	96	53.390	ENSHBUG00000007754	trmt13	99	53.390	Haplochromis_burtoni
ENSPVAG00000017430	TRMT13	99	90.526	ENSHGLG00000002164	TRMT13	98	90.526	Heterocephalus_glaber_female
ENSPVAG00000017430	TRMT13	99	90.526	ENSHGLG00100001618	TRMT13	98	90.526	Heterocephalus_glaber_male
ENSPVAG00000017430	TRMT13	96	48.283	ENSHCOG00000020553	trmt13	98	48.283	Hippocampus_comes
ENSPVAG00000017430	TRMT13	95	55.748	ENSIPUG00000024787	trmt13	98	56.277	Ictalurus_punctatus
ENSPVAG00000017430	TRMT13	100	92.723	ENSSTOG00000013483	TRMT13	100	92.723	Ictidomys_tridecemlineatus
ENSPVAG00000017430	TRMT13	99	87.292	ENSJJAG00000018012	Trmt13	99	87.292	Jaculus_jaculus
ENSPVAG00000017430	TRMT13	63	49.838	ENSKMAG00000007639	trmt13	93	48.718	Kryptolebias_marmoratus
ENSPVAG00000017430	TRMT13	96	50.000	ENSLBEG00000020238	trmt13	99	50.313	Labrus_bergylta
ENSPVAG00000017430	TRMT13	99	61.297	ENSLACG00000013153	TRMT13	100	60.644	Latimeria_chalumnae
ENSPVAG00000017430	TRMT13	95	58.297	ENSLOCG00000000418	trmt13	97	58.734	Lepisosteus_oculatus
ENSPVAG00000017430	TRMT13	77	88.919	ENSLAFG00000002383	TRMT13	100	88.919	Loxodonta_africana
ENSPVAG00000017430	TRMT13	100	91.684	ENSMFAG00000034681	TRMT13	100	91.684	Macaca_fascicularis
ENSPVAG00000017430	TRMT13	100	91.684	ENSMMUG00000004243	TRMT13	100	91.684	Macaca_mulatta
ENSPVAG00000017430	TRMT13	100	91.684	ENSMNEG00000036102	TRMT13	100	91.684	Macaca_nemestrina
ENSPVAG00000017430	TRMT13	100	91.684	ENSMLEG00000034258	TRMT13	100	91.684	Mandrillus_leucophaeus
ENSPVAG00000017430	TRMT13	96	51.266	ENSMAMG00000016597	trmt13	98	51.266	Mastacembelus_armatus
ENSPVAG00000017430	TRMT13	96	52.754	ENSMZEG00005020959	trmt13	99	52.754	Maylandia_zebra
ENSPVAG00000017430	TRMT13	90	66.975	ENSMGAG00000006970	TRMT13	100	66.975	Meleagris_gallopavo
ENSPVAG00000017430	TRMT13	99	84.375	ENSMAUG00000010448	Trmt13	99	84.375	Mesocricetus_auratus
ENSPVAG00000017430	TRMT13	100	92.516	ENSMICG00000005283	TRMT13	100	92.516	Microcebus_murinus
ENSPVAG00000017430	TRMT13	99	81.667	ENSMOCG00000019914	Trmt13	99	81.667	Microtus_ochrogaster
ENSPVAG00000017430	TRMT13	54	50.189	ENSMMOG00000007762	trmt13	89	50.189	Mola_mola
ENSPVAG00000017430	TRMT13	100	76.495	ENSMODG00000003646	TRMT13	100	76.495	Monodelphis_domestica
ENSPVAG00000017430	TRMT13	99	49.480	ENSMALG00000020965	trmt13	99	49.480	Monopterus_albus
ENSPVAG00000017430	TRMT13	99	85.774	MGP_CAROLIEiJ_G0025568	Trmt13	99	85.774	Mus_caroli
ENSPVAG00000017430	TRMT13	99	85.356	ENSMUSG00000033439	Trmt13	99	85.356	Mus_musculus
ENSPVAG00000017430	TRMT13	99	85.983	MGP_PahariEiJ_G0027014	Trmt13	99	85.983	Mus_pahari
ENSPVAG00000017430	TRMT13	99	85.774	MGP_SPRETEiJ_G0026518	Trmt13	99	85.774	Mus_spretus
ENSPVAG00000017430	TRMT13	79	90.026	ENSMPUG00000002078	-	100	90.026	Mustela_putorius_furo
ENSPVAG00000017430	TRMT13	100	80.042	ENSMLUG00000002124	TRMT13	100	80.042	Myotis_lucifugus
ENSPVAG00000017430	TRMT13	99	47.423	ENSNBRG00000006783	trmt13	95	50.216	Neolamprologus_brichardi
ENSPVAG00000017430	TRMT13	100	91.476	ENSNLEG00000035917	TRMT13	100	91.476	Nomascus_leucogenys
ENSPVAG00000017430	TRMT13	51	73.790	ENSMEUG00000013346	-	100	73.790	Notamacropus_eugenii
ENSPVAG00000017430	TRMT13	67	90.809	ENSOPRG00000012048	TRMT13	67	90.809	Ochotona_princeps
ENSPVAG00000017430	TRMT13	96	53.178	ENSONIG00000004574	trmt13	99	53.178	Oreochromis_niloticus
ENSPVAG00000017430	TRMT13	89	72.854	ENSOANG00000012057	TRMT13	99	72.854	Ornithorhynchus_anatinus
ENSPVAG00000017430	TRMT13	99	91.667	ENSOCUG00000023095	TRMT13	99	91.667	Oryctolagus_cuniculus
ENSPVAG00000017430	TRMT13	96	47.660	ENSORLG00000003320	trmt13	98	48.298	Oryzias_latipes
ENSPVAG00000017430	TRMT13	97	47.699	ENSORLG00020005972	trmt13	98	47.908	Oryzias_latipes_hni
ENSPVAG00000017430	TRMT13	96	52.026	ENSORLG00015002270	trmt13	98	52.026	Oryzias_latipes_hsok
ENSPVAG00000017430	TRMT13	96	51.168	ENSOMEG00000006724	trmt13	94	52.026	Oryzias_melastigma
ENSPVAG00000017430	TRMT13	98	91.755	ENSOGAG00000005618	TRMT13	97	91.060	Otolemur_garnettii
ENSPVAG00000017430	TRMT13	100	91.892	ENSOARG00000017983	TRMT13	100	91.892	Ovis_aries
ENSPVAG00000017430	TRMT13	100	91.268	ENSPPAG00000043736	TRMT13	100	91.268	Pan_paniscus
ENSPVAG00000017430	TRMT13	100	92.931	ENSPPRG00000003424	TRMT13	100	92.931	Panthera_pardus
ENSPVAG00000017430	TRMT13	100	92.931	ENSPTIG00000018598	TRMT13	100	92.931	Panthera_tigris_altaica
ENSPVAG00000017430	TRMT13	100	91.268	ENSPTRG00000001001	TRMT13	100	91.268	Pan_troglodytes
ENSPVAG00000017430	TRMT13	100	91.892	ENSPANG00000007598	TRMT13	100	92.086	Papio_anubis
ENSPVAG00000017430	TRMT13	95	54.902	ENSPKIG00000001514	trmt13	97	54.902	Paramormyrops_kingsleyae
ENSPVAG00000017430	TRMT13	86	71.154	ENSPSIG00000012703	TRMT13	99	71.154	Pelodiscus_sinensis
ENSPVAG00000017430	TRMT13	95	51.293	ENSPMGG00000013298	trmt13	93	51.293	Periophthalmus_magnuspinnatus
ENSPVAG00000017430	TRMT13	99	82.708	ENSPEMG00000000275	Trmt13	99	82.708	Peromyscus_maniculatus_bairdii
ENSPVAG00000017430	TRMT13	95	45.474	ENSPMAG00000000823	trmt13	97	45.474	Petromyzon_marinus
ENSPVAG00000017430	TRMT13	99	77.131	ENSPCIG00000007699	TRMT13	99	77.755	Phascolarctos_cinereus
ENSPVAG00000017430	TRMT13	99	48.109	ENSPFOG00000008675	trmt13	99	48.109	Poecilia_formosa
ENSPVAG00000017430	TRMT13	95	48.195	ENSPLAG00000009709	trmt13	99	48.195	Poecilia_latipinna
ENSPVAG00000017430	TRMT13	95	47.335	ENSPMEG00000022954	trmt13	99	47.335	Poecilia_mexicana
ENSPVAG00000017430	TRMT13	77	50.524	ENSPREG00000005645	trmt13	91	49.281	Poecilia_reticulata
ENSPVAG00000017430	TRMT13	100	91.268	ENSPPYG00000001120	TRMT13	100	91.268	Pongo_abelii
ENSPVAG00000017430	TRMT13	99	88.935	ENSPCAG00000002340	TRMT13	99	88.935	Procavia_capensis
ENSPVAG00000017430	TRMT13	100	92.308	ENSPCOG00000017984	TRMT13	100	92.308	Propithecus_coquereli
ENSPVAG00000017430	TRMT13	96	51.483	ENSPNYG00000013690	trmt13	99	51.483	Pundamilia_nyererei
ENSPVAG00000017430	TRMT13	95	55.338	ENSPNAG00000022130	trmt13	97	55.338	Pygocentrus_nattereri
ENSPVAG00000017430	TRMT13	99	85.356	ENSRNOG00000015140	Trmt13	96	85.356	Rattus_norvegicus
ENSPVAG00000017430	TRMT13	100	92.100	ENSRBIG00000037686	TRMT13	100	92.100	Rhinopithecus_bieti
ENSPVAG00000017430	TRMT13	100	92.100	ENSRROG00000044057	TRMT13	100	92.100	Rhinopithecus_roxellana
ENSPVAG00000017430	TRMT13	100	91.476	ENSSBOG00000026541	TRMT13	100	91.476	Saimiri_boliviensis_boliviensis
ENSPVAG00000017430	TRMT13	91	78.490	ENSSHAG00000005213	TRMT13	97	78.490	Sarcophilus_harrisii
ENSPVAG00000017430	TRMT13	95	54.013	ENSSFOG00015017560	trmt13	97	53.664	Scleropages_formosus
ENSPVAG00000017430	TRMT13	98	49.897	ENSSMAG00000014592	trmt13	98	49.897	Scophthalmus_maximus
ENSPVAG00000017430	TRMT13	95	50.000	ENSSDUG00000015508	trmt13	96	50.000	Seriola_dumerili
ENSPVAG00000017430	TRMT13	95	50.104	ENSSLDG00000019060	trmt13	96	50.104	Seriola_lalandi_dorsalis
ENSPVAG00000017430	TRMT13	99	78.033	ENSSARG00000010344	TRMT13	99	78.033	Sorex_araneus
ENSPVAG00000017430	TRMT13	95	68.777	ENSSPUG00000016339	TRMT13	99	68.777	Sphenodon_punctatus
ENSPVAG00000017430	TRMT13	95	52.597	ENSSPAG00000011922	trmt13	98	52.575	Stegastes_partitus
ENSPVAG00000017430	TRMT13	100	92.931	ENSSSCG00000006869	TRMT13	100	92.931	Sus_scrofa
ENSPVAG00000017430	TRMT13	97	66.880	ENSTGUG00000005253	TRMT13	100	66.880	Taeniopygia_guttata
ENSPVAG00000017430	TRMT13	95	50.107	ENSTRUG00000008400	trmt13	99	49.894	Takifugu_rubripes
ENSPVAG00000017430	TRMT13	86	75.422	ENSTBEG00000008911	TRMT13	99	75.422	Tupaia_belangeri
ENSPVAG00000017430	TRMT13	51	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSPVAG00000017430	TRMT13	100	86.486	ENSUAMG00000017251	TRMT13	100	86.486	Ursus_americanus
ENSPVAG00000017430	TRMT13	100	91.476	ENSUMAG00000007901	TRMT13	100	91.476	Ursus_maritimus
ENSPVAG00000017430	TRMT13	90	74.537	ENSVPAG00000001034	TRMT13	100	74.537	Vicugna_pacos
ENSPVAG00000017430	TRMT13	99	92.931	ENSVVUG00000021996	TRMT13	99	92.931	Vulpes_vulpes
ENSPVAG00000017430	TRMT13	98	56.383	ENSXETG00000013204	trmt13	99	56.383	Xenopus_tropicalis
ENSPVAG00000017430	TRMT13	95	48.211	ENSXMAG00000010765	trmt13	99	48.211	Xiphophorus_maculatus