EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017654 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain containing 5B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 4054 bases
Position: chrscaffold_16462:1391-5444
Accession: 105304940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016653	zf-C2H2	PF00096.26	2.2e-22	1	4
ENSPVAP00000016653	zf-C2H2	PF00096.26	2.2e-22	2	4
ENSPVAP00000016653	zf-C2H2	PF00096.26	2.2e-22	3	4
ENSPVAP00000016653	zf-C2H2	PF00096.26	2.2e-22	4	4
ENSPVAP00000016653	zf-met	PF12874.7	9.1e-11	1	3
ENSPVAP00000016653	zf-met	PF12874.7	9.1e-11	2	3
ENSPVAP00000016653	zf-met	PF12874.7	9.1e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017654	-	1464	XM_023522728	ENSPVAP00000016653	488 (aa)	XP_023378496	UPI00018B1179

Gene Model

Click here to download ENSPVAG00000017654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017654	-	93	48.458	ENSCHIG00000014993	-	92	48.458	Capra_hircus
ENSPVAG00000017654	-	93	48.018	ENSCHIG00000024202	-	92	48.018	Capra_hircus
ENSPVAG00000017654	-	84	45.742	ENSCHIG00000015589	-	100	45.742	Capra_hircus
ENSPVAG00000017654	-	94	57.783	ENSDNOG00000010100	-	93	57.996	Dasypus_novemcinctus
ENSPVAG00000017654	-	99	61.067	ENSEASG00005020480	-	100	61.067	Equus_asinus_asinus
ENSPVAG00000017654	-	99	63.127	ENSECAG00000006782	-	100	63.127	Equus_caballus
ENSPVAG00000017654	-	99	58.248	ENSFCAG00000041174	-	100	58.248	Felis_catus
ENSPVAG00000017654	-	94	42.857	ENSMAUG00000015051	Zscan5b	94	42.857	Mesocricetus_auratus
ENSPVAG00000017654	-	99	57.056	ENSMPUG00000006686	-	99	57.056	Mustela_putorius_furo
ENSPVAG00000017654	-	94	54.839	ENSMLUG00000029894	-	99	54.839	Myotis_lucifugus
ENSPVAG00000017654	-	99	46.237	ENSMLUG00000006448	-	95	46.237	Myotis_lucifugus
ENSPVAG00000017654	-	99	51.690	ENSMLUG00000024124	-	100	51.690	Myotis_lucifugus
ENSPVAG00000017654	-	97	49.580	ENSOGAG00000026429	-	97	49.580	Otolemur_garnettii
ENSPVAG00000017654	-	97	50.526	ENSOGAG00000011347	-	95	50.526	Otolemur_garnettii
ENSPVAG00000017654	-	99	58.656	ENSPTIG00000015051	-	100	58.656	Panthera_tigris_altaica
ENSPVAG00000017654	-	59	54.138	ENSVPAG00000002606	-	100	54.138	Vicugna_pacos