EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017719 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 16085 bases
Position: chrGeneScaffold_3392:47136-63220
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016716	PRP21_like_P	PF12230.8	9.7e-50	1	1
ENSPVAP00000016716	Surp	PF01805.20	4e-46	1	2
ENSPVAP00000016716	Surp	PF01805.20	4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017719	SF3A1-201	2379	-	ENSPVAP00000016716	792 (aa)	-	UPI00018B2EB5

Gene Model

Click here to download ENSPVAG00000017719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017719	SF3A1	94	97.987	ENSG00000099995	SF3A1	100	94.451	Homo_sapiens
ENSPVAG00000017719	SF3A1	94	85.810	ENSAPOG00000020465	sf3a1	95	85.542	Acanthochromis_polyacanthus
ENSPVAG00000017719	SF3A1	94	98.255	ENSAMEG00000007737	SF3A1	100	94.214	Ailuropoda_melanoleuca
ENSPVAG00000017719	SF3A1	94	85.810	ENSACIG00000020672	sf3a1	95	85.408	Amphilophus_citrinellus
ENSPVAG00000017719	SF3A1	94	85.810	ENSAOCG00000003060	sf3a1	95	85.542	Amphiprion_ocellaris
ENSPVAG00000017719	SF3A1	94	85.944	ENSAPEG00000010735	sf3a1	95	85.676	Amphiprion_percula
ENSPVAG00000017719	SF3A1	94	85.408	ENSATEG00000021201	sf3a1	94	85.542	Anabas_testudineus
ENSPVAG00000017719	SF3A1	94	92.771	ENSAPLG00000009057	SF3A1	96	92.771	Anas_platyrhynchos
ENSPVAG00000017719	SF3A1	100	84.049	ENSACAG00000009415	SF3A1	100	84.236	Anolis_carolinensis
ENSPVAG00000017719	SF3A1	94	98.121	ENSANAG00000032045	SF3A1	100	94.704	Aotus_nancymaae
ENSPVAG00000017719	SF3A1	94	85.925	ENSACLG00000012622	sf3a1	95	85.791	Astatotilapia_calliptera
ENSPVAG00000017719	SF3A1	94	84.605	ENSAMXG00000005382	sf3a1	95	84.605	Astyanax_mexicanus
ENSPVAG00000017719	SF3A1	94	98.523	ENSBTAG00000003390	SF3A1	100	94.956	Bos_taurus
ENSPVAG00000017719	SF3A1	81	42.669	WBGene00004188	prp-21	90	43.667	Caenorhabditis_elegans
ENSPVAG00000017719	SF3A1	94	98.255	ENSCJAG00000010370	SF3A1	100	94.830	Callithrix_jacchus
ENSPVAG00000017719	SF3A1	94	98.255	ENSCAFG00000012559	SF3A1	100	94.704	Canis_familiaris
ENSPVAG00000017719	SF3A1	94	98.255	ENSCAFG00020000838	SF3A1	100	94.704	Canis_lupus_dingo
ENSPVAG00000017719	SF3A1	100	93.947	ENSCHIG00000018642	SF3A1	100	94.830	Capra_hircus
ENSPVAG00000017719	SF3A1	94	98.389	ENSTSYG00000004739	SF3A1	100	94.830	Carlito_syrichta
ENSPVAG00000017719	SF3A1	91	80.000	ENSCAPG00000015414	SF3A1	95	80.000	Cavia_aperea
ENSPVAG00000017719	SF3A1	94	98.255	ENSCPOG00000014589	SF3A1	100	94.704	Cavia_porcellus
ENSPVAG00000017719	SF3A1	94	98.121	ENSCCAG00000032006	SF3A1	100	94.704	Cebus_capucinus
ENSPVAG00000017719	SF3A1	94	98.121	ENSCATG00000029241	SF3A1	100	94.704	Cercocebus_atys
ENSPVAG00000017719	SF3A1	94	97.718	ENSCLAG00000006508	SF3A1	100	94.199	Chinchilla_lanigera
ENSPVAG00000017719	SF3A1	94	98.121	ENSCSAG00000009470	SF3A1	100	94.704	Chlorocebus_sabaeus
ENSPVAG00000017719	SF3A1	58	99.083	ENSCHOG00000005201	SF3A1	65	99.083	Choloepus_hoffmanni
ENSPVAG00000017719	SF3A1	100	87.657	ENSCPBG00000007595	SF3A1	94	91.689	Chrysemys_picta_bellii
ENSPVAG00000017719	SF3A1	94	51.921	ENSCING00000008526	-	64	56.746	Ciona_intestinalis
ENSPVAG00000017719	SF3A1	94	50.991	ENSCSAVG00000005608	-	89	62.712	Ciona_savignyi
ENSPVAG00000017719	SF3A1	94	98.121	ENSCANG00000033564	SF3A1	100	94.704	Colobus_angolensis_palliatus
ENSPVAG00000017719	SF3A1	94	97.718	ENSCGRG00001008933	Sf3a1	100	94.325	Cricetulus_griseus_chok1gshd
ENSPVAG00000017719	SF3A1	94	97.718	ENSCGRG00000006127	Sf3a1	100	94.325	Cricetulus_griseus_crigri
ENSPVAG00000017719	SF3A1	94	83.155	ENSCSEG00000010792	sf3a1	95	82.754	Cynoglossus_semilaevis
ENSPVAG00000017719	SF3A1	94	84.203	ENSCVAG00000004560	sf3a1	95	83.936	Cyprinodon_variegatus
ENSPVAG00000017719	SF3A1	94	83.556	ENSDARG00000041887	sf3a1	95	83.957	Danio_rerio
ENSPVAG00000017719	SF3A1	94	98.260	ENSDNOG00000010629	SF3A1	100	93.711	Dasypus_novemcinctus
ENSPVAG00000017719	SF3A1	94	98.121	ENSDORG00000005613	Sf3a1	100	94.704	Dipodomys_ordii
ENSPVAG00000017719	SF3A1	79	61.017	FBgn0266917	Sf3a1	81	59.735	Drosophila_melanogaster
ENSPVAG00000017719	SF3A1	82	96.330	ENSETEG00000017194	SF3A1	100	94.017	Echinops_telfairi
ENSPVAG00000017719	SF3A1	94	66.961	ENSEBUG00000001285	sf3a1	93	66.582	Eptatretus_burgeri
ENSPVAG00000017719	SF3A1	100	95.965	ENSEASG00005010254	SF3A1	100	95.965	Equus_asinus_asinus
ENSPVAG00000017719	SF3A1	100	95.965	ENSECAG00000023962	SF3A1	100	95.965	Equus_caballus
ENSPVAG00000017719	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSPVAG00000017719	SF3A1	94	83.467	ENSELUG00000022578	sf3a1	95	83.200	Esox_lucius
ENSPVAG00000017719	SF3A1	94	98.255	ENSFCAG00000011932	SF3A1	100	94.704	Felis_catus
ENSPVAG00000017719	SF3A1	94	91.689	ENSFALG00000006944	SF3A1	94	92.225	Ficedula_albicollis
ENSPVAG00000017719	SF3A1	94	97.987	ENSFDAG00000009560	SF3A1	100	94.451	Fukomys_damarensis
ENSPVAG00000017719	SF3A1	94	85.676	ENSFHEG00000010866	sf3a1	95	85.141	Fundulus_heteroclitus
ENSPVAG00000017719	SF3A1	94	82.172	ENSGMOG00000016024	sf3a1	95	80.611	Gadus_morhua
ENSPVAG00000017719	SF3A1	94	92.627	ENSGALG00000007937	SF3A1	94	92.895	Gallus_gallus
ENSPVAG00000017719	SF3A1	94	84.739	ENSGAFG00000009111	sf3a1	95	84.203	Gambusia_affinis
ENSPVAG00000017719	SF3A1	94	83.512	ENSGACG00000011893	sf3a1	94	82.842	Gasterosteus_aculeatus
ENSPVAG00000017719	SF3A1	96	87.911	ENSGAGG00000000762	SF3A1	99	87.648	Gopherus_agassizii
ENSPVAG00000017719	SF3A1	94	97.987	ENSGGOG00000012631	SF3A1	100	94.451	Gorilla_gorilla
ENSPVAG00000017719	SF3A1	94	85.925	ENSHBUG00000015795	sf3a1	95	85.791	Haplochromis_burtoni
ENSPVAG00000017719	SF3A1	94	98.255	ENSHGLG00000007907	SF3A1	100	94.704	Heterocephalus_glaber_female
ENSPVAG00000017719	SF3A1	94	98.255	ENSHGLG00100013799	SF3A1	100	94.704	Heterocephalus_glaber_male
ENSPVAG00000017719	SF3A1	94	81.526	ENSHCOG00000015423	sf3a1	95	80.723	Hippocampus_comes
ENSPVAG00000017719	SF3A1	94	81.709	ENSIPUG00000002470	sf3a1	96	81.976	Ictalurus_punctatus
ENSPVAG00000017719	SF3A1	94	98.389	ENSSTOG00000013892	SF3A1	100	94.956	Ictidomys_tridecemlineatus
ENSPVAG00000017719	SF3A1	94	98.255	ENSJJAG00000022566	Sf3a1	100	94.584	Jaculus_jaculus
ENSPVAG00000017719	SF3A1	94	84.471	ENSKMAG00000002400	sf3a1	95	85.007	Kryptolebias_marmoratus
ENSPVAG00000017719	SF3A1	94	83.936	ENSLBEG00000022974	sf3a1	95	83.400	Labrus_bergylta
ENSPVAG00000017719	SF3A1	94	87.583	ENSLACG00000003565	SF3A1	95	87.316	Latimeria_chalumnae
ENSPVAG00000017719	SF3A1	94	86.133	ENSLOCG00000008251	sf3a1	95	86.267	Lepisosteus_oculatus
ENSPVAG00000017719	SF3A1	94	62.069	ENSLAFG00000026032	-	94	62.069	Loxodonta_africana
ENSPVAG00000017719	SF3A1	100	94.192	ENSLAFG00000000448	SF3A1	100	94.325	Loxodonta_africana
ENSPVAG00000017719	SF3A1	94	97.987	ENSMFAG00000031979	SF3A1	100	94.578	Macaca_fascicularis
ENSPVAG00000017719	SF3A1	94	97.987	ENSMMUG00000005547	SF3A1	100	94.578	Macaca_mulatta
ENSPVAG00000017719	SF3A1	94	97.852	ENSMNEG00000037229	SF3A1	100	94.451	Macaca_nemestrina
ENSPVAG00000017719	SF3A1	94	98.121	ENSMLEG00000041908	SF3A1	100	94.704	Mandrillus_leucophaeus
ENSPVAG00000017719	SF3A1	94	85.944	ENSMAMG00000006460	sf3a1	93	86.078	Mastacembelus_armatus
ENSPVAG00000017719	SF3A1	94	85.925	ENSMZEG00005009633	sf3a1	95	85.791	Maylandia_zebra
ENSPVAG00000017719	SF3A1	94	92.761	ENSMGAG00000001330	SF3A1	97	92.895	Meleagris_gallopavo
ENSPVAG00000017719	SF3A1	100	90.164	ENSMAUG00000020317	Sf3a1	100	90.164	Mesocricetus_auratus
ENSPVAG00000017719	SF3A1	94	97.852	ENSMICG00000010038	SF3A1	100	94.451	Microcebus_murinus
ENSPVAG00000017719	SF3A1	94	97.987	ENSMOCG00000008438	Sf3a1	100	94.578	Microtus_ochrogaster
ENSPVAG00000017719	SF3A1	94	82.999	ENSMMOG00000015588	sf3a1	95	82.329	Mola_mola
ENSPVAG00000017719	SF3A1	94	96.779	ENSMODG00000009270	SF3A1	100	93.569	Monodelphis_domestica
ENSPVAG00000017719	SF3A1	94	85.791	ENSMALG00000000148	sf3a1	99	85.014	Monopterus_albus
ENSPVAG00000017719	SF3A1	94	97.450	MGP_CAROLIEiJ_G0016029	Sf3a1	100	93.821	Mus_caroli
ENSPVAG00000017719	SF3A1	94	97.450	ENSMUSG00000002129	Sf3a1	100	93.821	Mus_musculus
ENSPVAG00000017719	SF3A1	100	94.578	MGP_PahariEiJ_G0016862	Sf3a1	100	94.578	Mus_pahari
ENSPVAG00000017719	SF3A1	94	97.450	MGP_SPRETEiJ_G0016870	Sf3a1	100	93.821	Mus_spretus
ENSPVAG00000017719	SF3A1	94	98.121	ENSMPUG00000013144	SF3A1	100	94.704	Mustela_putorius_furo
ENSPVAG00000017719	SF3A1	94	98.389	ENSMLUG00000002139	SF3A1	100	94.956	Myotis_lucifugus
ENSPVAG00000017719	SF3A1	94	98.121	ENSNGAG00000016977	Sf3a1	100	94.704	Nannospalax_galili
ENSPVAG00000017719	SF3A1	94	85.925	ENSNBRG00000016642	sf3a1	95	85.791	Neolamprologus_brichardi
ENSPVAG00000017719	SF3A1	94	98.121	ENSNLEG00000003686	SF3A1	100	94.704	Nomascus_leucogenys
ENSPVAG00000017719	SF3A1	90	86.376	ENSMEUG00000008741	SF3A1	100	83.553	Notamacropus_eugenii
ENSPVAG00000017719	SF3A1	94	97.852	ENSOPRG00000016636	SF3A1	100	94.199	Ochotona_princeps
ENSPVAG00000017719	SF3A1	94	97.987	ENSODEG00000002571	SF3A1	100	94.451	Octodon_degus
ENSPVAG00000017719	SF3A1	94	85.810	ENSONIG00000010848	sf3a1	95	85.141	Oreochromis_niloticus
ENSPVAG00000017719	SF3A1	94	98.389	ENSOCUG00000007633	SF3A1	100	94.704	Oryctolagus_cuniculus
ENSPVAG00000017719	SF3A1	90	83.333	ENSORLG00000013050	sf3a1	94	84.034	Oryzias_latipes
ENSPVAG00000017719	SF3A1	90	84.174	ENSORLG00020003236	sf3a1	90	84.174	Oryzias_latipes_hni
ENSPVAG00000017719	SF3A1	94	83.534	ENSORLG00015017411	sf3a1	95	84.070	Oryzias_latipes_hsok
ENSPVAG00000017719	SF3A1	94	83.936	ENSOMEG00000013362	sf3a1	95	83.668	Oryzias_melastigma
ENSPVAG00000017719	SF3A1	94	97.987	ENSOGAG00000012931	SF3A1	100	94.325	Otolemur_garnettii
ENSPVAG00000017719	SF3A1	94	96.107	ENSOARG00000006849	SF3A1	100	92.686	Ovis_aries
ENSPVAG00000017719	SF3A1	100	94.199	ENSPPAG00000041790	SF3A1	100	94.199	Pan_paniscus
ENSPVAG00000017719	SF3A1	94	98.255	ENSPPRG00000004391	SF3A1	100	94.704	Panthera_pardus
ENSPVAG00000017719	SF3A1	94	98.926	ENSPTIG00000000844	SF3A1	97	98.926	Panthera_tigris_altaica
ENSPVAG00000017719	SF3A1	94	97.987	ENSPTRG00000014240	SF3A1	100	94.451	Pan_troglodytes
ENSPVAG00000017719	SF3A1	94	98.121	ENSPANG00000020772	SF3A1	100	94.704	Papio_anubis
ENSPVAG00000017719	SF3A1	80	94.505	ENSPSIG00000012803	SF3A1	92	94.505	Pelodiscus_sinensis
ENSPVAG00000017719	SF3A1	94	83.780	ENSPMGG00000023096	sf3a1	98	83.780	Periophthalmus_magnuspinnatus
ENSPVAG00000017719	SF3A1	94	97.987	ENSPEMG00000009494	Sf3a1	100	94.578	Peromyscus_maniculatus_bairdii
ENSPVAG00000017719	SF3A1	63	78.529	ENSPMAG00000007139	-	85	77.470	Petromyzon_marinus
ENSPVAG00000017719	SF3A1	100	94.325	ENSPCIG00000022692	SF3A1	100	94.325	Phascolarctos_cinereus
ENSPVAG00000017719	SF3A1	92	78.367	ENSPFOG00000016768	sf3a1	93	77.823	Poecilia_formosa
ENSPVAG00000017719	SF3A1	94	85.007	ENSPLAG00000017268	sf3a1	95	84.471	Poecilia_latipinna
ENSPVAG00000017719	SF3A1	84	84.789	ENSPMEG00000019811	sf3a1	98	84.036	Poecilia_mexicana
ENSPVAG00000017719	SF3A1	94	85.141	ENSPREG00000010347	sf3a1	95	85.007	Poecilia_reticulata
ENSPVAG00000017719	SF3A1	94	98.121	ENSPPYG00000011707	SF3A1	100	94.704	Pongo_abelii
ENSPVAG00000017719	SF3A1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSPVAG00000017719	SF3A1	94	98.121	ENSPCOG00000026630	SF3A1	100	94.704	Propithecus_coquereli
ENSPVAG00000017719	SF3A1	94	85.925	ENSPNYG00000018706	sf3a1	95	85.791	Pundamilia_nyererei
ENSPVAG00000017719	SF3A1	94	83.733	ENSPNAG00000003721	sf3a1	95	84.533	Pygocentrus_nattereri
ENSPVAG00000017719	SF3A1	94	97.315	ENSRNOG00000005218	Sf3a1	100	93.695	Rattus_norvegicus
ENSPVAG00000017719	SF3A1	94	97.987	ENSRBIG00000032167	SF3A1	100	94.578	Rhinopithecus_bieti
ENSPVAG00000017719	SF3A1	94	97.987	ENSRROG00000044908	SF3A1	100	94.578	Rhinopithecus_roxellana
ENSPVAG00000017719	SF3A1	92	98.636	ENSSBOG00000021960	SF3A1	100	98.818	Saimiri_boliviensis_boliviensis
ENSPVAG00000017719	SF3A1	94	94.228	ENSSHAG00000003666	SF3A1	94	94.228	Sarcophilus_harrisii
ENSPVAG00000017719	SF3A1	94	84.554	ENSSFOG00015004579	sf3a1	95	85.220	Scleropages_formosus
ENSPVAG00000017719	SF3A1	94	82.999	ENSSMAG00000004275	sf3a1	95	82.195	Scophthalmus_maximus
ENSPVAG00000017719	SF3A1	94	85.542	ENSSDUG00000022219	sf3a1	95	85.007	Seriola_dumerili
ENSPVAG00000017719	SF3A1	94	85.542	ENSSLDG00000012642	sf3a1	95	85.007	Seriola_lalandi_dorsalis
ENSPVAG00000017719	SF3A1	94	94.631	ENSSARG00000005960	SF3A1	96	94.631	Sorex_araneus
ENSPVAG00000017719	SF3A1	94	90.873	ENSSPUG00000018863	SF3A1	100	88.060	Sphenodon_punctatus
ENSPVAG00000017719	SF3A1	94	86.078	ENSSPAG00000011856	sf3a1	95	85.542	Stegastes_partitus
ENSPVAG00000017719	SF3A1	94	98.389	ENSSSCG00000010002	SF3A1	100	94.830	Sus_scrofa
ENSPVAG00000017719	SF3A1	94	92.647	ENSTGUG00000010547	SF3A1	97	92.914	Taeniopygia_guttata
ENSPVAG00000017719	SF3A1	94	82.463	ENSTRUG00000006118	sf3a1	95	81.660	Takifugu_rubripes
ENSPVAG00000017719	SF3A1	64	80.970	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSPVAG00000017719	SF3A1	94	90.470	ENSTBEG00000012771	SF3A1	100	87.516	Tupaia_belangeri
ENSPVAG00000017719	SF3A1	94	97.319	ENSTTRG00000001535	SF3A1	100	94.081	Tursiops_truncatus
ENSPVAG00000017719	SF3A1	99	94.409	ENSUAMG00000006750	SF3A1	99	94.409	Ursus_americanus
ENSPVAG00000017719	SF3A1	94	98.926	ENSUMAG00000016665	SF3A1	100	95.126	Ursus_maritimus
ENSPVAG00000017719	SF3A1	94	98.255	ENSVVUG00000003075	SF3A1	100	94.704	Vulpes_vulpes
ENSPVAG00000017719	SF3A1	100	83.794	ENSXETG00000016144	sf3a1	94	87.265	Xenopus_tropicalis
ENSPVAG00000017719	SF3A1	94	84.471	ENSXCOG00000015653	sf3a1	95	84.337	Xiphophorus_couchianus
ENSPVAG00000017719	SF3A1	94	84.605	ENSXMAG00000002753	sf3a1	95	84.471	Xiphophorus_maculatus