EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000017767 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 31322 bases
Position: chrGeneScaffold_1216:125207-156528
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000016760	DUF1604	PF07713.13	5.2e-36	1	1
ENSPVAP00000016760	G-patch	PF01585.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000017767	GPATCH1-201	2790	-	ENSPVAP00000016760	929 (aa)	-	UPI00018B2F39

Gene Model

Click here to download ENSPVAG00000017767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000017767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000017767	GPATCH1	91	87.088	ENSG00000076650	GPATCH1	83	90.566	Homo_sapiens
ENSPVAG00000017767	GPATCH1	92	89.764	ENSAMEG00000015575	GPATCH1	83	88.525	Ailuropoda_melanoleuca
ENSPVAG00000017767	GPATCH1	73	69.061	ENSAOCG00000006668	gpatch1	69	69.061	Amphiprion_ocellaris
ENSPVAG00000017767	GPATCH1	76	54.290	ENSAPEG00000000026	gpatch1	74	54.571	Amphiprion_percula
ENSPVAG00000017767	GPATCH1	76	53.030	ENSATEG00000014494	gpatch1	75	53.151	Anabas_testudineus
ENSPVAG00000017767	GPATCH1	76	64.861	ENSAPLG00000007584	GPATCH1	80	64.861	Anas_platyrhynchos
ENSPVAG00000017767	GPATCH1	92	87.805	ENSANAG00000027002	GPATCH1	83	87.805	Aotus_nancymaae
ENSPVAG00000017767	GPATCH1	76	53.771	ENSACLG00000024740	gpatch1	72	53.771	Astatotilapia_calliptera
ENSPVAG00000017767	GPATCH1	76	53.979	ENSAMXG00000020177	gpatch1	80	54.111	Astyanax_mexicanus
ENSPVAG00000017767	GPATCH1	83	87.022	ENSBTAG00000000721	GPATCH1	83	87.022	Bos_taurus
ENSPVAG00000017767	GPATCH1	92	86.992	ENSCJAG00000000684	GPATCH1	83	87.500	Callithrix_jacchus
ENSPVAG00000017767	GPATCH1	92	88.976	ENSCAFG00000007457	GPATCH1	70	87.449	Canis_familiaris
ENSPVAG00000017767	GPATCH1	86	87.449	ENSCAFG00020019731	GPATCH1	84	87.449	Canis_lupus_dingo
ENSPVAG00000017767	GPATCH1	91	88.251	ENSCHIG00000019626	GPATCH1	84	88.828	Capra_hircus
ENSPVAG00000017767	GPATCH1	86	82.703	ENSCAPG00000008827	GPATCH1	81	82.703	Cavia_aperea
ENSPVAG00000017767	GPATCH1	90	83.657	ENSCPOG00000024477	GPATCH1	81	83.657	Cavia_porcellus
ENSPVAG00000017767	GPATCH1	92	86.179	ENSCCAG00000024676	GPATCH1	83	87.805	Cebus_capucinus
ENSPVAG00000017767	GPATCH1	91	87.088	ENSCATG00000043637	GPATCH1	83	91.509	Cercocebus_atys
ENSPVAG00000017767	GPATCH1	86	84.046	ENSCLAG00000003395	-	84	84.046	Chinchilla_lanigera
ENSPVAG00000017767	GPATCH1	91	84.553	ENSCSAG00000004743	GPATCH1	82	83.951	Chlorocebus_sabaeus
ENSPVAG00000017767	GPATCH1	84	81.571	ENSCHOG00000012865	GPATCH1	90	81.571	Choloepus_hoffmanni
ENSPVAG00000017767	GPATCH1	73	67.894	ENSCPBG00000000666	GPATCH1	90	66.024	Chrysemys_picta_bellii
ENSPVAG00000017767	GPATCH1	68	35.404	ENSCING00000012518	-	74	35.404	Ciona_intestinalis
ENSPVAG00000017767	GPATCH1	82	93.000	ENSCANG00000012540	GPATCH1	79	93.000	Colobus_angolensis_palliatus
ENSPVAG00000017767	GPATCH1	89	82.194	ENSCGRG00001016736	Gpatch1	82	82.194	Cricetulus_griseus_chok1gshd
ENSPVAG00000017767	GPATCH1	66	87.135	ENSCGRG00000005069	Gpatch1	69	87.135	Cricetulus_griseus_crigri
ENSPVAG00000017767	GPATCH1	63	53.333	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSPVAG00000017767	GPATCH1	76	53.117	ENSDARG00000033418	gpatch1	75	53.794	Danio_rerio
ENSPVAG00000017767	GPATCH1	83	84.290	ENSDNOG00000005291	GPATCH1	87	84.290	Dasypus_novemcinctus
ENSPVAG00000017767	GPATCH1	83	82.222	ENSDORG00000012546	Gpatch1	86	82.222	Dipodomys_ordii
ENSPVAG00000017767	GPATCH1	69	31.025	FBgn0036386	CG8833	67	31.387	Drosophila_melanogaster
ENSPVAG00000017767	GPATCH1	85	79.495	ENSETEG00000003626	GPATCH1	78	79.495	Echinops_telfairi
ENSPVAG00000017767	GPATCH1	73	38.819	ENSEBUG00000011286	gpatch1	73	40.059	Eptatretus_burgeri
ENSPVAG00000017767	GPATCH1	90	88.414	ENSEASG00005021162	GPATCH1	85	88.414	Equus_asinus_asinus
ENSPVAG00000017767	GPATCH1	85	90.625	ENSECAG00000022743	GPATCH1	80	87.978	Equus_caballus
ENSPVAG00000017767	GPATCH1	64	95.364	ENSEEUG00000012925	GPATCH1	64	95.364	Erinaceus_europaeus
ENSPVAG00000017767	GPATCH1	76	52.774	ENSELUG00000018195	gpatch1	79	52.474	Esox_lucius
ENSPVAG00000017767	GPATCH1	92	88.189	ENSFCAG00000014917	GPATCH1	99	80.522	Felis_catus
ENSPVAG00000017767	GPATCH1	77	65.193	ENSFALG00000007821	GPATCH1	77	65.193	Ficedula_albicollis
ENSPVAG00000017767	GPATCH1	87	84.762	ENSFDAG00000003871	GPATCH1	91	83.714	Fukomys_damarensis
ENSPVAG00000017767	GPATCH1	68	57.143	ENSGMOG00000003830	gpatch1	81	57.143	Gadus_morhua
ENSPVAG00000017767	GPATCH1	78	65.075	ENSGALG00000004839	GPATCH1	78	66.526	Gallus_gallus
ENSPVAG00000017767	GPATCH1	76	50.487	ENSGACG00000017544	gpatch1	79	50.487	Gasterosteus_aculeatus
ENSPVAG00000017767	GPATCH1	78	64.946	ENSGAGG00000010067	GPATCH1	78	65.217	Gopherus_agassizii
ENSPVAG00000017767	GPATCH1	89	86.992	ENSGGOG00000010862	GPATCH1	82	87.805	Gorilla_gorilla
ENSPVAG00000017767	GPATCH1	76	53.911	ENSHBUG00000023462	gpatch1	73	53.911	Haplochromis_burtoni
ENSPVAG00000017767	GPATCH1	91	83.880	ENSHGLG00000009334	GPATCH1	84	83.880	Heterocephalus_glaber_female
ENSPVAG00000017767	GPATCH1	91	84.016	ENSHGLG00100018074	GPATCH1	84	84.016	Heterocephalus_glaber_male
ENSPVAG00000017767	GPATCH1	70	56.522	ENSIPUG00000014977	gpatch1	73	54.494	Ictalurus_punctatus
ENSPVAG00000017767	GPATCH1	91	90.678	ENSSTOG00000003720	GPATCH1	90	90.476	Ictidomys_tridecemlineatus
ENSPVAG00000017767	GPATCH1	82	93.548	ENSJJAG00000023765	Gpatch1	84	83.174	Jaculus_jaculus
ENSPVAG00000017767	GPATCH1	77	52.072	ENSKMAG00000017950	gpatch1	75	52.479	Kryptolebias_marmoratus
ENSPVAG00000017767	GPATCH1	76	52.582	ENSLBEG00000026527	gpatch1	73	52.853	Labrus_bergylta
ENSPVAG00000017767	GPATCH1	75	61.000	ENSLACG00000008130	GPATCH1	74	62.115	Latimeria_chalumnae
ENSPVAG00000017767	GPATCH1	77	57.517	ENSLOCG00000001800	gpatch1	76	57.521	Lepisosteus_oculatus
ENSPVAG00000017767	GPATCH1	91	88.496	ENSLAFG00000013589	GPATCH1	91	88.496	Loxodonta_africana
ENSPVAG00000017767	GPATCH1	82	86.951	ENSMFAG00000034418	GPATCH1	83	91.509	Macaca_fascicularis
ENSPVAG00000017767	GPATCH1	91	87.106	ENSMMUG00000011790	GPATCH1	83	92.453	Macaca_mulatta
ENSPVAG00000017767	GPATCH1	91	86.401	ENSMNEG00000045084	GPATCH1	78	92.000	Macaca_nemestrina
ENSPVAG00000017767	GPATCH1	91	84.553	ENSMLEG00000043840	GPATCH1	81	82.927	Mandrillus_leucophaeus
ENSPVAG00000017767	GPATCH1	76	53.631	ENSMZEG00005001926	gpatch1	73	53.631	Maylandia_zebra
ENSPVAG00000017767	GPATCH1	75	66.524	ENSMGAG00000005775	GPATCH1	75	66.524	Meleagris_gallopavo
ENSPVAG00000017767	GPATCH1	81	88.462	ENSMICG00000004829	GPATCH1	84	79.292	Microcebus_murinus
ENSPVAG00000017767	GPATCH1	91	82.090	ENSMOCG00000000174	Gpatch1	84	82.090	Microtus_ochrogaster
ENSPVAG00000017767	GPATCH1	75	52.661	ENSMMOG00000002140	gpatch1	79	52.441	Mola_mola
ENSPVAG00000017767	GPATCH1	78	73.706	ENSMODG00000012226	GPATCH1	90	74.309	Monodelphis_domestica
ENSPVAG00000017767	GPATCH1	76	52.348	ENSMALG00000014386	gpatch1	75	52.348	Monopterus_albus
ENSPVAG00000017767	GPATCH1	91	83.956	ENSMUSG00000063808	Gpatch1	100	94.898	Mus_musculus
ENSPVAG00000017767	GPATCH1	91	83.956	MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	Mus_pahari
ENSPVAG00000017767	GPATCH1	90	84.094	MGP_SPRETEiJ_G0030681	Gpatch1	100	95.918	Mus_spretus
ENSPVAG00000017767	GPATCH1	92	88.661	ENSMPUG00000007658	GPATCH1	83	88.661	Mustela_putorius_furo
ENSPVAG00000017767	GPATCH1	92	88.798	ENSMLUG00000012161	GPATCH1	84	88.798	Myotis_lucifugus
ENSPVAG00000017767	GPATCH1	92	83.743	ENSNGAG00000012455	Gpatch1	84	83.743	Nannospalax_galili
ENSPVAG00000017767	GPATCH1	91	86.813	ENSNLEG00000007659	GPATCH1	83	90.566	Nomascus_leucogenys
ENSPVAG00000017767	GPATCH1	78	64.295	ENSMEUG00000015174	GPATCH1	79	64.295	Notamacropus_eugenii
ENSPVAG00000017767	GPATCH1	90	83.586	ENSODEG00000007103	GPATCH1	82	84.211	Octodon_degus
ENSPVAG00000017767	GPATCH1	77	53.333	ENSONIG00000003302	gpatch1	79	53.333	Oreochromis_niloticus
ENSPVAG00000017767	GPATCH1	90	73.728	ENSOANG00000012732	GPATCH1	78	73.728	Ornithorhynchus_anatinus
ENSPVAG00000017767	GPATCH1	91	86.885	ENSOCUG00000015905	GPATCH1	83	86.885	Oryctolagus_cuniculus
ENSPVAG00000017767	GPATCH1	76	50.139	ENSORLG00000018706	gpatch1	75	50.485	Oryzias_latipes
ENSPVAG00000017767	GPATCH1	73	51.220	ENSOMEG00000022688	gpatch1	76	51.532	Oryzias_melastigma
ENSPVAG00000017767	GPATCH1	78	85.499	ENSOGAG00000004016	GPATCH1	92	85.499	Otolemur_garnettii
ENSPVAG00000017767	GPATCH1	82	87.448	ENSOARG00000004365	GPATCH1	91	79.810	Ovis_aries
ENSPVAG00000017767	GPATCH1	91	86.951	ENSPPAG00000020990	GPATCH1	83	89.720	Pan_paniscus
ENSPVAG00000017767	GPATCH1	92	88.976	ENSPPRG00000017245	GPATCH1	99	80.740	Panthera_pardus
ENSPVAG00000017767	GPATCH1	92	88.976	ENSPTIG00000019649	GPATCH1	99	81.610	Panthera_tigris_altaica
ENSPVAG00000017767	GPATCH1	91	86.951	ENSPTRG00000010803	GPATCH1	83	90.566	Pan_troglodytes
ENSPVAG00000017767	GPATCH1	82	86.813	ENSPANG00000012374	GPATCH1	83	91.509	Papio_anubis
ENSPVAG00000017767	GPATCH1	76	55.435	ENSPKIG00000020745	gpatch1	73	55.616	Paramormyrops_kingsleyae
ENSPVAG00000017767	GPATCH1	78	65.400	ENSPSIG00000013433	GPATCH1	78	65.536	Pelodiscus_sinensis
ENSPVAG00000017767	GPATCH1	92	82.104	ENSPEMG00000000636	Gpatch1	84	82.104	Peromyscus_maniculatus_bairdii
ENSPVAG00000017767	GPATCH1	83	74.079	ENSPCIG00000021003	GPATCH1	87	75.676	Phascolarctos_cinereus
ENSPVAG00000017767	GPATCH1	73	46.821	ENSPREG00000008264	gpatch1	84	46.262	Poecilia_reticulata
ENSPVAG00000017767	GPATCH1	91	86.992	ENSPPYG00000009824	GPATCH1	82	87.805	Pongo_abelii
ENSPVAG00000017767	GPATCH1	75	83.389	ENSPCAG00000005931	GPATCH1	83	84.071	Procavia_capensis
ENSPVAG00000017767	GPATCH1	85	81.310	ENSPCOG00000009674	GPATCH1	89	81.310	Propithecus_coquereli
ENSPVAG00000017767	GPATCH1	76	53.911	ENSPNYG00000018189	gpatch1	81	53.911	Pundamilia_nyererei
ENSPVAG00000017767	GPATCH1	76	53.262	ENSPNAG00000013187	gpatch1	76	53.743	Pygocentrus_nattereri
ENSPVAG00000017767	GPATCH1	91	83.679	ENSRNOG00000011584	Gpatch1	83	83.679	Rattus_norvegicus
ENSPVAG00000017767	GPATCH1	91	78.875	ENSRBIG00000034723	GPATCH1	89	78.875	Rhinopithecus_bieti
ENSPVAG00000017767	GPATCH1	91	86.813	ENSRROG00000024428	GPATCH1	83	90.566	Rhinopithecus_roxellana
ENSPVAG00000017767	GPATCH1	92	86.179	ENSSBOG00000034650	GPATCH1	83	87.805	Saimiri_boliviensis_boliviensis
ENSPVAG00000017767	GPATCH1	91	74.659	ENSSHAG00000016016	GPATCH1	90	74.659	Sarcophilus_harrisii
ENSPVAG00000017767	GPATCH1	76	54.830	ENSSFOG00015011535	gpatch1	77	54.694	Scleropages_formosus
ENSPVAG00000017767	GPATCH1	74	49.800	ENSSMAG00000002883	gpatch1	76	49.867	Scophthalmus_maximus
ENSPVAG00000017767	GPATCH1	76	52.374	ENSSDUG00000007444	gpatch1	74	52.933	Seriola_dumerili
ENSPVAG00000017767	GPATCH1	76	52.646	ENSSLDG00000002856	gpatch1	82	52.782	Seriola_lalandi_dorsalis
ENSPVAG00000017767	GPATCH1	72	82.467	ENSSARG00000004108	GPATCH1	72	82.467	Sorex_araneus
ENSPVAG00000017767	GPATCH1	83	88.798	ENSSSCG00000002865	GPATCH1	86	88.798	Sus_scrofa
ENSPVAG00000017767	GPATCH1	77	65.517	ENSTGUG00000009401	GPATCH1	78	65.517	Taeniopygia_guttata
ENSPVAG00000017767	GPATCH1	76	51.172	ENSTRUG00000025081	gpatch1	79	50.738	Takifugu_rubripes
ENSPVAG00000017767	GPATCH1	76	51.172	ENSTRUG00000005785	-	79	50.738	Takifugu_rubripes
ENSPVAG00000017767	GPATCH1	77	51.507	ENSTNIG00000002554	gpatch1	92	51.984	Tetraodon_nigroviridis
ENSPVAG00000017767	GPATCH1	62	78.208	ENSTBEG00000007750	-	82	78.208	Tupaia_belangeri
ENSPVAG00000017767	GPATCH1	91	87.719	ENSTTRG00000012221	GPATCH1	91	87.719	Tursiops_truncatus
ENSPVAG00000017767	GPATCH1	91	88.388	ENSUMAG00000014645	GPATCH1	92	87.712	Ursus_maritimus
ENSPVAG00000017767	GPATCH1	71	97.714	ENSVPAG00000010313	GPATCH1	77	97.826	Vicugna_pacos
ENSPVAG00000017767	GPATCH1	86	87.312	ENSVVUG00000016572	GPATCH1	84	87.312	Vulpes_vulpes
ENSPVAG00000017767	GPATCH1	86	53.438	ENSXETG00000018276	gpatch1	77	56.616	Xenopus_tropicalis