EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000024161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 593 bases
Position: chrGeneScaffold_4065:71-663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000017066	APOBEC_N	PF08210.11	1.2e-39	1	1
ENSPVAP00000017066	APOBEC_C	PF05240.14	7.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000024264	-	399	-	ENSPVAP00000017066	132 (aa)	-	UPI0001951555

Gene Model

Click here to download ENSPVAG00000024161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000024161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000024161	-	97	39.062	ENSPVAG00000004045	-	64	39.062
ENSPVAG00000024161	-	98	93.077	ENSPVAG00000009461	-	53	93.077
ENSPVAG00000024161	-	100	35.606	ENSPVAG00000009462	-	75	35.606
ENSPVAG00000024161	-	94	43.200	ENSPVAG00000012185	AICDA	63	43.200
ENSPVAG00000024161	-	100	93.939	ENSPVAG00000024267	-	100	93.939
ENSPVAG00000024161	-	95	34.375	ENSPVAG00000008316	APOBEC2	57	34.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000024161	-	93	37.008	ENSG00000100298	APOBEC3H	70	37.008	Homo_sapiens
ENSPVAG00000024161	-	95	61.321	ENSAMEG00000010818	-	54	61.321	Ailuropoda_melanoleuca
ENSPVAG00000024161	-	93	35.433	ENSANAG00000025410	APOBEC3H	57	35.433	Aotus_nancymaae
ENSPVAG00000024161	-	98	52.713	ENSBTAG00000007755	APOBEC3H	66	52.713	Bos_taurus
ENSPVAG00000024161	-	93	34.646	ENSCJAG00000012524	APOBEC3H	65	34.646	Callithrix_jacchus
ENSPVAG00000024161	-	98	37.692	ENSCAFG00000001361	APOBEC3Z3	68	37.692	Canis_familiaris
ENSPVAG00000024161	-	98	36.154	ENSCAFG00020002584	-	68	36.154	Canis_lupus_dingo
ENSPVAG00000024161	-	94	52.419	ENSCHIG00000026580	-	66	52.419	Capra_hircus
ENSPVAG00000024161	-	98	36.154	ENSTSYG00000032894	-	76	36.154	Carlito_syrichta
ENSPVAG00000024161	-	95	47.200	ENSCPOG00000009257	-	60	47.200	Cavia_porcellus
ENSPVAG00000024161	-	93	35.433	ENSCCAG00000008525	APOBEC3H	63	35.433	Cebus_capucinus
ENSPVAG00000024161	-	93	38.583	ENSCATG00000030302	APOBEC3H	71	38.583	Cercocebus_atys
ENSPVAG00000024161	-	95	40.157	ENSCLAG00000016615	-	63	40.157	Chinchilla_lanigera
ENSPVAG00000024161	-	93	39.370	ENSCSAG00000006371	APOBEC3H	60	39.370	Chlorocebus_sabaeus
ENSPVAG00000024161	-	95	48.438	ENSCGRG00001022976	Apobec3	60	48.438	Cricetulus_griseus_chok1gshd
ENSPVAG00000024161	-	95	48.438	ENSCGRG00000005621	Apobec3	65	48.438	Cricetulus_griseus_crigri
ENSPVAG00000024161	-	95	49.194	ENSDORG00000027271	-	100	47.959	Dipodomys_ordii
ENSPVAG00000024161	-	94	40.323	ENSECAG00000007726	APOBEC3H	54	40.323	Equus_caballus
ENSPVAG00000024161	-	94	37.097	ENSFCAG00000005251	APOBEC3Z3	64	37.097	Felis_catus
ENSPVAG00000024161	-	94	40.476	ENSSTOG00000007125	-	61	40.476	Ictidomys_tridecemlineatus
ENSPVAG00000024161	-	95	49.600	ENSJJAG00000016840	-	56	49.600	Jaculus_jaculus
ENSPVAG00000024161	-	97	43.651	ENSLAFG00000027404	-	68	43.651	Loxodonta_africana
ENSPVAG00000024161	-	93	38.583	ENSMFAG00000031827	APOBEC3H	64	38.583	Macaca_fascicularis
ENSPVAG00000024161	-	93	37.795	ENSMMUG00000001016	APOBEC3H	65	36.765	Macaca_mulatta
ENSPVAG00000024161	-	93	38.583	ENSMNEG00000039259	APOBEC3H	64	38.583	Macaca_nemestrina
ENSPVAG00000024161	-	94	37.500	ENSMLEG00000033417	APOBEC3H	64	37.500	Mandrillus_leucophaeus
ENSPVAG00000024161	-	94	47.244	ENSMAUG00000011683	Apobec3	61	47.244	Mesocricetus_auratus
ENSPVAG00000024161	-	95	49.219	ENSMOCG00000021576	Apobec3	61	49.219	Microtus_ochrogaster
ENSPVAG00000024161	-	100	45.926	MGP_CAROLIEiJ_G0020029	Apobec3	98	48.193	Mus_caroli
ENSPVAG00000024161	-	95	48.485	ENSMUSG00000009585	Apobec3	98	49.398	Mus_musculus
ENSPVAG00000024161	-	95	47.656	MGP_PahariEiJ_G0020031	-	62	47.244	Mus_pahari
ENSPVAG00000024161	-	100	45.926	MGP_SPRETEiJ_G0020927	Apobec3	98	49.398	Mus_spretus
ENSPVAG00000024161	-	98	53.968	ENSMPUG00000013239	-	66	53.968	Mustela_putorius_furo
ENSPVAG00000024161	-	98	49.242	ENSNGAG00000018998	Apobec3	74	50.505	Nannospalax_galili
ENSPVAG00000024161	-	93	37.008	ENSNLEG00000015218	-	60	37.008	Nomascus_leucogenys
ENSPVAG00000024161	-	98	49.231	ENSOCUG00000023913	-	61	49.231	Oryctolagus_cuniculus
ENSPVAG00000024161	-	94	53.226	ENSOARG00000016290	APOBEC3F	67	53.226	Ovis_aries
ENSPVAG00000024161	-	93	35.433	ENSPPAG00000036522	APOBEC3H	69	35.433	Pan_paniscus
ENSPVAG00000024161	-	94	35.484	ENSPPRG00000003941	-	64	35.484	Panthera_pardus
ENSPVAG00000024161	-	96	51.969	ENSPPRG00000003675	-	66	51.969	Panthera_pardus
ENSPVAG00000024161	-	94	35.484	ENSPTIG00000010283	-	64	35.484	Panthera_tigris_altaica
ENSPVAG00000024161	-	93	35.433	ENSPTRG00000014390	APOBEC3H	69	35.433	Pan_troglodytes
ENSPVAG00000024161	-	93	39.370	ENSPANG00000010774	APOBEC3H	65	40.157	Papio_anubis
ENSPVAG00000024161	-	95	51.562	ENSPEMG00000000456	Apobec3	57	51.562	Peromyscus_maniculatus_bairdii
ENSPVAG00000024161	-	93	34.646	ENSPPYG00000011834	-	60	34.646	Pongo_abelii
ENSPVAG00000024161	-	95	36.800	ENSPCAG00000015655	-	72	36.800	Procavia_capensis
ENSPVAG00000024161	-	93	48.819	ENSRNOG00000016852	Apobec3	62	48.819	Rattus_norvegicus
ENSPVAG00000024161	-	94	36.719	ENSRBIG00000029088	APOBEC3H	64	36.719	Rhinopithecus_bieti
ENSPVAG00000024161	-	94	36.719	ENSRROG00000024699	APOBEC3H	64	36.719	Rhinopithecus_roxellana
ENSPVAG00000024161	-	93	34.646	ENSSBOG00000030005	APOBEC3H	69	34.646	Saimiri_boliviensis_boliviensis
ENSPVAG00000024161	-	100	56.693	ENSSSCG00000000091	APOBEC3B	62	56.693	Sus_scrofa
ENSPVAG00000024161	-	94	40.323	ENSTBEG00000001532	-	74	40.323	Tupaia_belangeri
ENSPVAG00000024161	-	99	41.221	ENSTTRG00000001266	-	74	41.221	Tursiops_truncatus
ENSPVAG00000024161	-	94	36.290	ENSUAMG00000004427	-	56	36.290	Ursus_americanus
ENSPVAG00000024161	-	94	36.290	ENSUMAG00000014435	-	64	36.290	Ursus_maritimus
ENSPVAG00000024161	-	94	37.903	ENSVPAG00000011108	-	97	37.903	Vicugna_pacos