EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000024267 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 595 bases
Position: chrscaffold_50241:184-778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000017041	APOBEC_N	PF08210.11	9.2e-40	1	1
ENSPVAP00000017041	APOBEC_C	PF05240.14	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000024084	-	399	-	ENSPVAP00000017041	132 (aa)	-	UPI000195154F

Gene Model

Click here to download ENSPVAG00000024267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000024267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000024267	-	77	42.157	ENSPVAG00000004045	-	51	42.157
ENSPVAG00000024267	-	100	33.333	ENSPVAG00000009462	-	75	33.333
ENSPVAG00000024267	-	94	43.200	ENSPVAG00000012185	AICDA	63	43.200
ENSPVAG00000024267	-	100	93.939	ENSPVAG00000024161	-	100	93.939
ENSPVAG00000024267	-	96	35.385	ENSPVAG00000008316	APOBEC2	58	35.385
ENSPVAG00000024267	-	98	97.692	ENSPVAG00000009461	-	53	97.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000024267	-	93	37.008	ENSG00000100298	APOBEC3H	70	37.008	Homo_sapiens
ENSPVAG00000024267	-	95	53.175	ENSAMEG00000010818	-	58	53.175	Ailuropoda_melanoleuca
ENSPVAG00000024267	-	99	52.713	ENSBTAG00000007755	APOBEC3H	68	52.713	Bos_taurus
ENSPVAG00000024267	-	77	39.216	ENSCJAG00000012524	APOBEC3H	58	36.782	Callithrix_jacchus
ENSPVAG00000024267	-	98	36.923	ENSCAFG00000001361	APOBEC3Z3	68	36.923	Canis_familiaris
ENSPVAG00000024267	-	98	35.385	ENSCAFG00020002584	-	68	35.385	Canis_lupus_dingo
ENSPVAG00000024267	-	99	50.382	ENSCHIG00000026580	-	68	50.382	Capra_hircus
ENSPVAG00000024267	-	98	34.615	ENSTSYG00000032894	-	76	34.615	Carlito_syrichta
ENSPVAG00000024267	-	100	47.200	ENSCPOG00000009257	-	62	47.200	Cavia_porcellus
ENSPVAG00000024267	-	98	35.075	ENSCCAG00000008525	APOBEC3H	63	36.220	Cebus_capucinus
ENSPVAG00000024267	-	93	37.795	ENSCATG00000030302	APOBEC3H	71	37.795	Cercocebus_atys
ENSPVAG00000024267	-	97	38.760	ENSCLAG00000016615	-	64	38.760	Chinchilla_lanigera
ENSPVAG00000024267	-	93	38.583	ENSCSAG00000006371	APOBEC3H	60	38.583	Chlorocebus_sabaeus
ENSPVAG00000024267	-	95	48.438	ENSCGRG00001022976	Apobec3	60	48.438	Cricetulus_griseus_chok1gshd
ENSPVAG00000024267	-	95	48.438	ENSCGRG00000005621	Apobec3	65	48.438	Cricetulus_griseus_crigri
ENSPVAG00000024267	-	96	47.244	ENSDORG00000027271	-	100	45.918	Dipodomys_ordii
ENSPVAG00000024267	-	94	38.710	ENSECAG00000007726	APOBEC3H	54	38.710	Equus_caballus
ENSPVAG00000024267	-	94	33.871	ENSFCAG00000005251	APOBEC3Z3	64	33.871	Felis_catus
ENSPVAG00000024267	-	99	36.090	ENSSTOG00000007125	-	64	36.090	Ictidomys_tridecemlineatus
ENSPVAG00000024267	-	95	48.800	ENSJJAG00000016840	-	56	48.800	Jaculus_jaculus
ENSPVAG00000024267	-	97	45.238	ENSLAFG00000027404	-	68	45.238	Loxodonta_africana
ENSPVAG00000024267	-	93	37.795	ENSMFAG00000031827	APOBEC3H	64	37.795	Macaca_fascicularis
ENSPVAG00000024267	-	93	37.008	ENSMMUG00000001016	APOBEC3H	65	36.029	Macaca_mulatta
ENSPVAG00000024267	-	93	37.795	ENSMNEG00000039259	APOBEC3H	64	37.795	Macaca_nemestrina
ENSPVAG00000024267	-	95	36.923	ENSMLEG00000033417	APOBEC3H	65	36.923	Mandrillus_leucophaeus
ENSPVAG00000024267	-	97	44.275	ENSMAUG00000011683	Apobec3	62	44.275	Mesocricetus_auratus
ENSPVAG00000024267	-	95	47.656	ENSMOCG00000021576	Apobec3	61	47.656	Microtus_ochrogaster
ENSPVAG00000024267	-	100	44.444	MGP_CAROLIEiJ_G0020029	Apobec3	98	44.578	Mus_caroli
ENSPVAG00000024267	-	100	44.444	ENSMUSG00000009585	Apobec3	98	45.783	Mus_musculus
ENSPVAG00000024267	-	95	46.094	MGP_PahariEiJ_G0020031	-	62	45.669	Mus_pahari
ENSPVAG00000024267	-	100	44.444	MGP_SPRETEiJ_G0020927	Apobec3	98	45.783	Mus_spretus
ENSPVAG00000024267	-	98	53.226	ENSMPUG00000013239	-	66	53.226	Mustela_putorius_furo
ENSPVAG00000024267	-	98	50.000	ENSNGAG00000018998	Apobec3	74	50.505	Nannospalax_galili
ENSPVAG00000024267	-	98	35.075	ENSNLEG00000015218	-	64	35.075	Nomascus_leucogenys
ENSPVAG00000024267	-	98	48.462	ENSOCUG00000023913	-	61	48.462	Oryctolagus_cuniculus
ENSPVAG00000024267	-	99	51.145	ENSOARG00000016290	APOBEC3F	70	51.145	Ovis_aries
ENSPVAG00000024267	-	93	37.008	ENSPPAG00000036522	APOBEC3H	69	37.008	Pan_paniscus
ENSPVAG00000024267	-	95	52.000	ENSPPRG00000003675	-	65	52.000	Panthera_pardus
ENSPVAG00000024267	-	94	32.258	ENSPPRG00000003941	-	64	32.258	Panthera_pardus
ENSPVAG00000024267	-	94	32.258	ENSPTIG00000010283	-	64	32.258	Panthera_tigris_altaica
ENSPVAG00000024267	-	93	37.008	ENSPTRG00000014390	APOBEC3H	69	37.008	Pan_troglodytes
ENSPVAG00000024267	-	93	40.157	ENSPANG00000010774	APOBEC3H	65	40.945	Papio_anubis
ENSPVAG00000024267	-	97	49.618	ENSPEMG00000000456	Apobec3	58	49.618	Peromyscus_maniculatus_bairdii
ENSPVAG00000024267	-	93	33.858	ENSPPYG00000011834	-	60	33.858	Pongo_abelii
ENSPVAG00000024267	-	95	36.800	ENSPCAG00000015655	-	72	36.800	Procavia_capensis
ENSPVAG00000024267	-	93	48.031	ENSRNOG00000016852	Apobec3	62	48.031	Rattus_norvegicus
ENSPVAG00000024267	-	95	35.385	ENSRBIG00000029088	APOBEC3H	65	35.385	Rhinopithecus_bieti
ENSPVAG00000024267	-	95	35.385	ENSRROG00000024699	APOBEC3H	65	35.385	Rhinopithecus_roxellana
ENSPVAG00000024267	-	77	40.196	ENSSBOG00000030005	APOBEC3H	60	37.647	Saimiri_boliviensis_boliviensis
ENSPVAG00000024267	-	100	56.800	ENSSSCG00000000091	APOBEC3B	61	56.800	Sus_scrofa
ENSPVAG00000024267	-	94	36.290	ENSTBEG00000001532	-	74	36.290	Tupaia_belangeri
ENSPVAG00000024267	-	99	36.641	ENSTTRG00000001266	-	74	36.641	Tursiops_truncatus
ENSPVAG00000024267	-	94	34.677	ENSUAMG00000004427	-	56	34.677	Ursus_americanus
ENSPVAG00000024267	-	94	34.677	ENSUMAG00000014435	-	64	34.677	Ursus_maritimus
ENSPVAG00000024267	-	94	35.484	ENSVPAG00000011108	-	97	35.484	Vicugna_pacos