EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000000224 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 9405 bases
Position: chrMCGX01005941.1:2304212-2313616
Accession: 108538858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000000144	SMN	PF06003.12	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000000758	-	714	XM_017887176	ENSRBIP00000000144	237 (aa)	XP_017742665	A0A2K6JMA5

Gene Model

Click here to download ENSRBIG00000000224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000000224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000000224	-	100	83.966	ENSRBIG00000032452	-	100	83.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000000224	-	100	99.160	ENSG00000119953	SMNDC1	100	99.160	Homo_sapiens
ENSRBIG00000000224	-	100	74.370	ENSAPOG00000021772	smndc1	100	74.370	Acanthochromis_polyacanthus
ENSRBIG00000000224	-	100	99.580	ENSAMEG00000005251	SMNDC1	100	99.580	Ailuropoda_melanoleuca
ENSRBIG00000000224	-	100	76.987	ENSACIG00000004819	smndc1	100	76.987	Amphilophus_citrinellus
ENSRBIG00000000224	-	100	74.370	ENSAOCG00000017869	smndc1	100	74.370	Amphiprion_ocellaris
ENSRBIG00000000224	-	100	74.370	ENSAPEG00000007752	smndc1	100	74.370	Amphiprion_percula
ENSRBIG00000000224	-	100	75.630	ENSATEG00000006830	smndc1	100	75.630	Anabas_testudineus
ENSRBIG00000000224	-	83	95.960	ENSAPLG00000004322	SMNDC1	100	95.960	Anas_platyrhynchos
ENSRBIG00000000224	-	100	94.538	ENSACAG00000005983	SMNDC1	100	94.538	Anolis_carolinensis
ENSRBIG00000000224	-	100	99.580	ENSANAG00000032875	SMNDC1	100	99.580	Aotus_nancymaae
ENSRBIG00000000224	-	100	76.050	ENSACLG00000016360	smndc1	100	76.050	Astatotilapia_calliptera
ENSRBIG00000000224	-	100	75.630	ENSAMXG00000020310	smndc1	100	75.630	Astyanax_mexicanus
ENSRBIG00000000224	-	100	99.160	ENSBTAG00000000551	SMNDC1	100	99.160	Bos_taurus
ENSRBIG00000000224	-	100	99.580	ENSCJAG00000018624	SMNDC1	100	99.580	Callithrix_jacchus
ENSRBIG00000000224	-	100	99.580	ENSCAFG00000010720	SMNDC1	100	99.580	Canis_familiaris
ENSRBIG00000000224	-	100	99.580	ENSCAFG00020011913	SMNDC1	100	99.580	Canis_lupus_dingo
ENSRBIG00000000224	-	100	99.160	ENSCHIG00000010604	SMNDC1	100	99.160	Capra_hircus
ENSRBIG00000000224	-	100	99.160	ENSTSYG00000026454	SMNDC1	100	99.160	Carlito_syrichta
ENSRBIG00000000224	-	100	83.750	ENSCAPG00000009132	SMNDC1	100	98.507	Cavia_aperea
ENSRBIG00000000224	-	100	98.739	ENSCPOG00000031666	SMNDC1	100	98.739	Cavia_porcellus
ENSRBIG00000000224	-	100	99.580	ENSCCAG00000021793	SMNDC1	100	99.580	Cebus_capucinus
ENSRBIG00000000224	-	100	99.160	ENSCATG00000035910	SMNDC1	100	99.160	Cercocebus_atys
ENSRBIG00000000224	-	100	98.319	ENSCLAG00000002838	SMNDC1	100	98.319	Chinchilla_lanigera
ENSRBIG00000000224	-	100	99.580	ENSCSAG00000005169	SMNDC1	100	99.580	Chlorocebus_sabaeus
ENSRBIG00000000224	-	81	98.964	ENSCHOG00000002936	SMNDC1	100	98.964	Choloepus_hoffmanni
ENSRBIG00000000224	-	100	97.479	ENSCPBG00000012837	SMNDC1	100	97.479	Chrysemys_picta_bellii
ENSRBIG00000000224	-	100	92.017	ENSCANG00000034620	-	100	92.017	Colobus_angolensis_palliatus
ENSRBIG00000000224	-	100	99.580	ENSCANG00000031720	-	100	99.580	Colobus_angolensis_palliatus
ENSRBIG00000000224	-	100	78.571	ENSCANG00000036994	-	100	78.571	Colobus_angolensis_palliatus
ENSRBIG00000000224	-	100	98.739	ENSCGRG00001012973	Smndc1	100	98.739	Cricetulus_griseus_chok1gshd
ENSRBIG00000000224	-	100	98.739	ENSCGRG00000012396	Smndc1	100	98.739	Cricetulus_griseus_crigri
ENSRBIG00000000224	-	100	75.210	ENSCSEG00000015621	smndc1	100	75.210	Cynoglossus_semilaevis
ENSRBIG00000000224	-	100	76.050	ENSCVAG00000020432	smndc1	100	76.050	Cyprinodon_variegatus
ENSRBIG00000000224	-	100	78.571	ENSDARG00000056235	smndc1	100	78.571	Danio_rerio
ENSRBIG00000000224	-	100	99.580	ENSDNOG00000016387	SMNDC1	83	99.580	Dasypus_novemcinctus
ENSRBIG00000000224	-	100	99.580	ENSDORG00000023715	Smndc1	100	99.580	Dipodomys_ordii
ENSRBIG00000000224	-	95	42.339	FBgn0039977	CG17454	98	43.145	Drosophila_melanogaster
ENSRBIG00000000224	-	100	70.954	ENSEBUG00000010929	smndc1	100	70.954	Eptatretus_burgeri
ENSRBIG00000000224	-	100	99.580	ENSEASG00005014930	SMNDC1	100	99.580	Equus_asinus_asinus
ENSRBIG00000000224	-	100	99.580	ENSECAG00000029973	SMNDC1	100	99.580	Equus_caballus
ENSRBIG00000000224	-	83	69.697	ENSEEUG00000013407	-	100	69.697	Erinaceus_europaeus
ENSRBIG00000000224	-	100	75.630	ENSELUG00000000227	smndc1	100	77.311	Esox_lucius
ENSRBIG00000000224	-	100	99.580	ENSFCAG00000027353	SMNDC1	100	99.580	Felis_catus
ENSRBIG00000000224	-	100	95.798	ENSFALG00000002306	SMNDC1	100	95.798	Ficedula_albicollis
ENSRBIG00000000224	-	100	98.319	ENSFDAG00000006468	SMNDC1	100	98.319	Fukomys_damarensis
ENSRBIG00000000224	-	100	75.630	ENSFHEG00000020150	smndc1	100	75.630	Fundulus_heteroclitus
ENSRBIG00000000224	-	100	76.050	ENSGMOG00000016585	smndc1	100	76.050	Gadus_morhua
ENSRBIG00000000224	-	100	95.798	ENSGALG00000008561	SMNDC1	100	95.798	Gallus_gallus
ENSRBIG00000000224	-	100	74.790	ENSGAFG00000011582	smndc1	100	74.790	Gambusia_affinis
ENSRBIG00000000224	-	100	75.210	ENSGACG00000009468	smndc1	100	75.210	Gasterosteus_aculeatus
ENSRBIG00000000224	-	100	97.479	ENSGAGG00000024547	SMNDC1	100	97.479	Gopherus_agassizii
ENSRBIG00000000224	-	100	99.580	ENSGGOG00000010071	SMNDC1	100	99.580	Gorilla_gorilla
ENSRBIG00000000224	-	100	76.050	ENSHBUG00000017596	smndc1	100	76.050	Haplochromis_burtoni
ENSRBIG00000000224	-	100	98.319	ENSHGLG00000013390	-	100	98.319	Heterocephalus_glaber_female
ENSRBIG00000000224	-	100	68.443	ENSHGLG00000001157	-	100	65.306	Heterocephalus_glaber_female
ENSRBIG00000000224	-	100	98.319	ENSHGLG00100004814	-	100	98.319	Heterocephalus_glaber_male
ENSRBIG00000000224	-	100	76.639	ENSHGLG00100004278	-	100	76.230	Heterocephalus_glaber_male
ENSRBIG00000000224	-	100	74.477	ENSHCOG00000000783	smndc1	100	74.477	Hippocampus_comes
ENSRBIG00000000224	-	100	76.891	ENSIPUG00000004217	smndc1	100	76.891	Ictalurus_punctatus
ENSRBIG00000000224	-	100	99.160	ENSSTOG00000006088	SMNDC1	100	99.160	Ictidomys_tridecemlineatus
ENSRBIG00000000224	-	100	98.739	ENSJJAG00000019974	Smndc1	100	98.739	Jaculus_jaculus
ENSRBIG00000000224	-	100	74.790	ENSKMAG00000020134	smndc1	100	74.790	Kryptolebias_marmoratus
ENSRBIG00000000224	-	100	74.370	ENSLBEG00000004598	smndc1	100	74.370	Labrus_bergylta
ENSRBIG00000000224	-	100	83.613	ENSLACG00000007784	SMNDC1	100	83.613	Latimeria_chalumnae
ENSRBIG00000000224	-	100	83.613	ENSLOCG00000012355	smndc1	100	83.613	Lepisosteus_oculatus
ENSRBIG00000000224	-	100	99.160	ENSLAFG00000014353	SMNDC1	100	99.160	Loxodonta_africana
ENSRBIG00000000224	-	100	99.580	ENSMFAG00000002433	-	100	99.580	Macaca_fascicularis
ENSRBIG00000000224	-	100	81.513	ENSMFAG00000038381	-	100	81.513	Macaca_fascicularis
ENSRBIG00000000224	-	100	99.580	ENSMMUG00000007775	SMNDC1	100	99.580	Macaca_mulatta
ENSRBIG00000000224	-	100	81.513	ENSMMUG00000045875	-	100	81.513	Macaca_mulatta
ENSRBIG00000000224	-	100	99.580	ENSMNEG00000042963	-	100	99.580	Macaca_nemestrina
ENSRBIG00000000224	-	100	88.608	ENSMNEG00000033853	-	100	88.608	Macaca_nemestrina
ENSRBIG00000000224	-	100	93.305	ENSMLEG00000040236	SMNDC1	100	92.887	Mandrillus_leucophaeus
ENSRBIG00000000224	-	89	72.770	ENSMAMG00000018233	smndc1	87	72.770	Mastacembelus_armatus
ENSRBIG00000000224	-	100	76.050	ENSMZEG00005027510	smndc1	100	76.050	Maylandia_zebra
ENSRBIG00000000224	-	84	95.500	ENSMGAG00000010777	SMNDC1	84	95.500	Meleagris_gallopavo
ENSRBIG00000000224	-	100	99.580	ENSMAUG00000012243	-	100	99.580	Mesocricetus_auratus
ENSRBIG00000000224	-	99	80.085	ENSMAUG00000005459	-	93	80.085	Mesocricetus_auratus
ENSRBIG00000000224	-	100	85.714	ENSMICG00000031640	-	100	85.714	Microcebus_murinus
ENSRBIG00000000224	-	100	98.739	ENSMICG00000027336	-	100	98.739	Microcebus_murinus
ENSRBIG00000000224	-	100	99.160	ENSMOCG00000002458	Smndc1	100	99.160	Microtus_ochrogaster
ENSRBIG00000000224	-	100	75.630	ENSMMOG00000008856	smndc1	100	75.630	Mola_mola
ENSRBIG00000000224	-	100	98.739	ENSMODG00000010542	SMNDC1	100	98.739	Monodelphis_domestica
ENSRBIG00000000224	-	100	76.050	ENSMALG00000017598	smndc1	100	76.050	Monopterus_albus
ENSRBIG00000000224	-	100	98.319	MGP_CAROLIEiJ_G0023072	Smndc1	100	98.319	Mus_caroli
ENSRBIG00000000224	-	100	98.739	ENSMUSG00000025024	Smndc1	100	98.739	Mus_musculus
ENSRBIG00000000224	-	100	98.319	MGP_PahariEiJ_G0014560	Smndc1	100	98.319	Mus_pahari
ENSRBIG00000000224	-	100	98.739	MGP_SPRETEiJ_G0023993	Smndc1	100	98.739	Mus_spretus
ENSRBIG00000000224	-	100	99.580	ENSMPUG00000002089	SMNDC1	100	99.580	Mustela_putorius_furo
ENSRBIG00000000224	-	100	98.319	ENSMLUG00000016007	SMNDC1	100	98.319	Myotis_lucifugus
ENSRBIG00000000224	-	100	98.739	ENSNGAG00000006833	Smndc1	100	98.739	Nannospalax_galili
ENSRBIG00000000224	-	100	75.630	ENSNBRG00000017089	smndc1	100	75.630	Neolamprologus_brichardi
ENSRBIG00000000224	-	100	99.580	ENSNLEG00000015471	SMNDC1	100	99.580	Nomascus_leucogenys
ENSRBIG00000000224	-	82	57.500	ENSMEUG00000010120	-	99	58.000	Notamacropus_eugenii
ENSRBIG00000000224	-	100	98.739	ENSOPRG00000015348	SMNDC1	100	98.739	Ochotona_princeps
ENSRBIG00000000224	-	100	69.198	ENSODEG00000007594	-	100	66.245	Octodon_degus
ENSRBIG00000000224	-	100	75.630	ENSONIG00000000434	smndc1	100	75.630	Oreochromis_niloticus
ENSRBIG00000000224	-	100	97.479	ENSOANG00000001598	SMNDC1	100	97.479	Ornithorhynchus_anatinus
ENSRBIG00000000224	-	100	98.739	ENSOCUG00000008145	-	100	98.739	Oryctolagus_cuniculus
ENSRBIG00000000224	-	100	76.371	ENSOCUG00000012274	-	100	78.059	Oryctolagus_cuniculus
ENSRBIG00000000224	-	100	75.630	ENSORLG00000005934	smndc1	95	75.630	Oryzias_latipes
ENSRBIG00000000224	-	100	75.630	ENSORLG00020008796	smndc1	95	75.630	Oryzias_latipes_hni
ENSRBIG00000000224	-	100	75.630	ENSORLG00015013666	smndc1	100	75.630	Oryzias_latipes_hsok
ENSRBIG00000000224	-	100	77.311	ENSOMEG00000007590	smndc1	100	77.311	Oryzias_melastigma
ENSRBIG00000000224	-	100	99.160	ENSOGAG00000000571	SMNDC1	100	99.160	Otolemur_garnettii
ENSRBIG00000000224	-	100	99.160	ENSOARG00000009500	SMNDC1	100	99.160	Ovis_aries
ENSRBIG00000000224	-	100	99.580	ENSPPAG00000027815	SMNDC1	100	99.580	Pan_paniscus
ENSRBIG00000000224	-	100	99.580	ENSPPRG00000013749	SMNDC1	100	99.580	Panthera_pardus
ENSRBIG00000000224	-	100	99.580	ENSPTIG00000011451	SMNDC1	100	99.580	Panthera_tigris_altaica
ENSRBIG00000000224	-	100	99.580	ENSPTRG00000002937	SMNDC1	100	99.580	Pan_troglodytes
ENSRBIG00000000224	-	100	93.697	ENSPANG00000031346	-	100	93.697	Papio_anubis
ENSRBIG00000000224	-	100	99.580	ENSPANG00000020805	-	100	99.580	Papio_anubis
ENSRBIG00000000224	-	100	80.252	ENSPKIG00000017164	smndc1	100	80.252	Paramormyrops_kingsleyae
ENSRBIG00000000224	-	100	97.059	ENSPSIG00000012257	SMNDC1	100	97.059	Pelodiscus_sinensis
ENSRBIG00000000224	-	100	73.109	ENSPMGG00000015651	smndc1	100	73.109	Periophthalmus_magnuspinnatus
ENSRBIG00000000224	-	100	99.580	ENSPEMG00000022058	Smndc1	100	99.580	Peromyscus_maniculatus_bairdii
ENSRBIG00000000224	-	100	67.623	ENSPMAG00000007705	smndc1	100	68.033	Petromyzon_marinus
ENSRBIG00000000224	-	100	98.739	ENSPCIG00000018419	SMNDC1	100	98.739	Phascolarctos_cinereus
ENSRBIG00000000224	-	97	62.609	ENSPCIG00000009693	-	100	62.609	Phascolarctos_cinereus
ENSRBIG00000000224	-	100	75.210	ENSPFOG00000017113	smndc1	100	75.210	Poecilia_formosa
ENSRBIG00000000224	-	100	75.630	ENSPLAG00000010372	smndc1	100	75.630	Poecilia_latipinna
ENSRBIG00000000224	-	100	75.630	ENSPMEG00000012288	smndc1	100	75.630	Poecilia_mexicana
ENSRBIG00000000224	-	100	74.790	ENSPREG00000012279	smndc1	100	74.790	Poecilia_reticulata
ENSRBIG00000000224	-	100	99.580	ENSPPYG00000002643	SMNDC1	100	99.580	Pongo_abelii
ENSRBIG00000000224	-	81	97.927	ENSPCAG00000016183	SMNDC1	100	97.927	Procavia_capensis
ENSRBIG00000000224	-	100	99.160	ENSPCOG00000024343	SMNDC1	100	99.160	Propithecus_coquereli
ENSRBIG00000000224	-	100	75.630	ENSPVAG00000004368	SMNDC1	100	75.630	Pteropus_vampyrus
ENSRBIG00000000224	-	92	69.778	ENSPNYG00000024093	smndc1	98	69.778	Pundamilia_nyererei
ENSRBIG00000000224	-	100	76.050	ENSPNAG00000025285	smndc1	100	76.050	Pygocentrus_nattereri
ENSRBIG00000000224	-	100	98.319	ENSRNOG00000014833	Smndc1	100	98.319	Rattus_norvegicus
ENSRBIG00000000224	-	100	99.580	ENSRROG00000044992	-	100	99.580	Rhinopithecus_roxellana
ENSRBIG00000000224	-	100	84.388	ENSRROG00000039125	-	100	84.388	Rhinopithecus_roxellana
ENSRBIG00000000224	-	100	99.580	ENSSBOG00000026789	SMNDC1	100	99.580	Saimiri_boliviensis_boliviensis
ENSRBIG00000000224	-	100	98.739	ENSSHAG00000015189	SMNDC1	100	98.739	Sarcophilus_harrisii
ENSRBIG00000000224	-	100	79.412	ENSSFOG00015008311	smndc1	100	79.412	Scleropages_formosus
ENSRBIG00000000224	-	100	75.630	ENSSMAG00000020118	smndc1	100	75.630	Scophthalmus_maximus
ENSRBIG00000000224	-	100	76.050	ENSSDUG00000015330	smndc1	100	76.050	Seriola_dumerili
ENSRBIG00000000224	-	100	76.050	ENSSLDG00000017325	smndc1	100	76.050	Seriola_lalandi_dorsalis
ENSRBIG00000000224	-	100	98.319	ENSSARG00000006063	SMNDC1	100	98.319	Sorex_araneus
ENSRBIG00000000224	-	100	95.798	ENSSPUG00000004574	SMNDC1	100	95.798	Sphenodon_punctatus
ENSRBIG00000000224	-	100	73.950	ENSSPAG00000000338	smndc1	100	73.950	Stegastes_partitus
ENSRBIG00000000224	-	100	99.160	ENSSSCG00000030507	SMNDC1	100	99.160	Sus_scrofa
ENSRBIG00000000224	-	100	95.798	ENSTGUG00000010599	SMNDC1	100	95.798	Taeniopygia_guttata
ENSRBIG00000000224	-	100	73.950	ENSTRUG00000023281	smndc1	100	73.950	Takifugu_rubripes
ENSRBIG00000000224	-	100	74.790	ENSTNIG00000013331	smndc1	100	74.790	Tetraodon_nigroviridis
ENSRBIG00000000224	-	100	99.160	ENSTBEG00000014337	SMNDC1	100	99.160	Tupaia_belangeri
ENSRBIG00000000224	-	100	99.580	ENSUAMG00000008142	SMNDC1	100	99.580	Ursus_americanus
ENSRBIG00000000224	-	100	99.580	ENSUMAG00000023722	SMNDC1	100	99.580	Ursus_maritimus
ENSRBIG00000000224	-	83	98.990	ENSVPAG00000003402	SMNDC1	100	98.990	Vicugna_pacos
ENSRBIG00000000224	-	100	99.580	ENSVVUG00000007820	SMNDC1	100	99.580	Vulpes_vulpes
ENSRBIG00000000224	-	60	81.690	ENSXETG00000015415	SMNDC1	100	81.690	Xenopus_tropicalis
ENSRBIG00000000224	-	100	74.790	ENSXCOG00000009159	smndc1	100	74.790	Xiphophorus_couchianus
ENSRBIG00000000224	-	100	74.370	ENSXMAG00000012755	smndc1	100	74.370	Xiphophorus_maculatus