EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000001561 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrMCGX01005159.1:4160673-4161044
Accession: 108537269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000000296	LSM	PF01423.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000001701	LSM10-201	372	XM_017884493	ENSRBIP00000000296	123 (aa)	XP_017739982	A0A2K6JMP3

Gene Model

Click here to download ENSRBIG00000001561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000001561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000001561	LSM10	60	32.432	ENSRBIG00000022996	SNRPD1	84	30.000
ENSRBIG00000001561	LSM10	55	30.000	ENSRBIG00000010172	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000001561	LSM10	100	97.561	ENSG00000181817	LSM10	100	97.561	Homo_sapiens
ENSRBIG00000001561	LSM10	100	90.244	ENSAMEG00000019854	LSM10	100	90.244	Ailuropoda_melanoleuca
ENSRBIG00000001561	LSM10	97	65.546	ENSACIG00000015420	oscp1a	79	65.546	Amphilophus_citrinellus
ENSRBIG00000001561	LSM10	93	68.696	ENSAOCG00000014654	-	95	68.696	Amphiprion_ocellaris
ENSRBIG00000001561	LSM10	93	68.696	ENSAOCG00000015618	LSM10	95	68.696	Amphiprion_ocellaris
ENSRBIG00000001561	LSM10	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSRBIG00000001561	LSM10	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSRBIG00000001561	LSM10	93	68.696	ENSAPEG00000021845	-	95	68.696	Amphiprion_percula
ENSRBIG00000001561	LSM10	91	62.500	ENSATEG00000006310	oscp1a	83	62.500	Anabas_testudineus
ENSRBIG00000001561	LSM10	95	69.231	ENSACAG00000001231	LSM10	95	69.231	Anolis_carolinensis
ENSRBIG00000001561	LSM10	98	96.694	ENSANAG00000031489	-	99	96.694	Aotus_nancymaae
ENSRBIG00000001561	LSM10	100	97.561	ENSANAG00000018759	-	100	97.561	Aotus_nancymaae
ENSRBIG00000001561	LSM10	94	66.379	ENSACLG00000004728	oscp1a	94	66.379	Astatotilapia_calliptera
ENSRBIG00000001561	LSM10	96	66.102	ENSAMXG00000025301	oscp1a	98	66.102	Astyanax_mexicanus
ENSRBIG00000001561	LSM10	98	90.909	ENSBTAG00000024096	LSM10	99	90.909	Bos_taurus
ENSRBIG00000001561	LSM10	100	96.748	ENSCJAG00000044880	LSM10	100	96.748	Callithrix_jacchus
ENSRBIG00000001561	LSM10	100	91.870	ENSCAFG00000003382	LSM10	100	91.870	Canis_familiaris
ENSRBIG00000001561	LSM10	100	91.870	ENSCAFG00020008920	LSM10	100	91.870	Canis_lupus_dingo
ENSRBIG00000001561	LSM10	98	90.909	ENSCHIG00000009398	LSM10	99	90.909	Capra_hircus
ENSRBIG00000001561	LSM10	100	91.057	ENSCAPG00000012567	LSM10	100	91.057	Cavia_aperea
ENSRBIG00000001561	LSM10	100	91.057	ENSCPOG00000039302	LSM10	100	91.057	Cavia_porcellus
ENSRBIG00000001561	LSM10	100	97.561	ENSCCAG00000018913	-	100	97.561	Cebus_capucinus
ENSRBIG00000001561	LSM10	98	95.041	ENSCCAG00000008378	-	98	95.041	Cebus_capucinus
ENSRBIG00000001561	LSM10	100	100.000	ENSCATG00000006589	LSM10	100	100.000	Cercocebus_atys
ENSRBIG00000001561	LSM10	100	93.496	ENSCLAG00000008633	LSM10	100	93.496	Chinchilla_lanigera
ENSRBIG00000001561	LSM10	100	100.000	ENSCSAG00000000134	LSM10	100	100.000	Chlorocebus_sabaeus
ENSRBIG00000001561	LSM10	100	92.800	ENSCHOG00000008615	LSM10	100	92.800	Choloepus_hoffmanni
ENSRBIG00000001561	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSRBIG00000001561	LSM10	100	100.000	ENSCANG00000019928	LSM10	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000001561	LSM10	98	92.500	ENSCGRG00001004317	-	98	92.500	Cricetulus_griseus_chok1gshd
ENSRBIG00000001561	LSM10	93	81.897	ENSCGRG00001022673	-	93	81.897	Cricetulus_griseus_chok1gshd
ENSRBIG00000001561	LSM10	98	92.500	ENSCGRG00000014935	-	98	92.500	Cricetulus_griseus_crigri
ENSRBIG00000001561	LSM10	93	81.897	ENSCGRG00000015514	-	93	81.897	Cricetulus_griseus_crigri
ENSRBIG00000001561	LSM10	94	62.069	ENSCSEG00000010374	oscp1a	77	62.609	Cynoglossus_semilaevis
ENSRBIG00000001561	LSM10	98	63.333	ENSCVAG00000001536	oscp1a	91	63.333	Cyprinodon_variegatus
ENSRBIG00000001561	LSM10	69	68.235	ENSDARG00000109563	CABZ01074453.1	99	68.235	Danio_rerio
ENSRBIG00000001561	LSM10	98	69.167	ENSDARG00000101222	oscp1a	99	69.167	Danio_rerio
ENSRBIG00000001561	LSM10	99	94.262	ENSDNOG00000036662	LSM10	99	94.262	Dasypus_novemcinctus
ENSRBIG00000001561	LSM10	100	92.683	ENSDORG00000007579	Lsm10	100	92.683	Dipodomys_ordii
ENSRBIG00000001561	LSM10	85	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSRBIG00000001561	LSM10	100	88.618	ENSETEG00000005703	LSM10	100	88.618	Echinops_telfairi
ENSRBIG00000001561	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSRBIG00000001561	LSM10	100	91.870	ENSEASG00005012194	LSM10	100	91.870	Equus_asinus_asinus
ENSRBIG00000001561	LSM10	100	92.683	ENSECAG00000005071	LSM10	100	92.683	Equus_caballus
ENSRBIG00000001561	LSM10	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSRBIG00000001561	LSM10	98	66.667	ENSELUG00000007452	oscp1a	98	66.667	Esox_lucius
ENSRBIG00000001561	LSM10	100	69.106	ENSFALG00000000851	LSM10	100	69.106	Ficedula_albicollis
ENSRBIG00000001561	LSM10	100	89.431	ENSFDAG00000021056	LSM10	100	89.431	Fukomys_damarensis
ENSRBIG00000001561	LSM10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSRBIG00000001561	LSM10	86	65.094	ENSGMOG00000019832	oscp1a	89	65.094	Gadus_morhua
ENSRBIG00000001561	LSM10	100	71.545	ENSGALG00000002127	LSM10	100	71.545	Gallus_gallus
ENSRBIG00000001561	LSM10	93	59.322	ENSGAFG00000016445	oscp1a	94	59.322	Gambusia_affinis
ENSRBIG00000001561	LSM10	94	62.931	ENSGACG00000002329	oscp1a	95	62.931	Gasterosteus_aculeatus
ENSRBIG00000001561	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSRBIG00000001561	LSM10	100	97.561	ENSGGOG00000003556	LSM10	100	97.561	Gorilla_gorilla
ENSRBIG00000001561	LSM10	94	66.379	ENSHBUG00000001722	oscp1a	94	66.379	Haplochromis_burtoni
ENSRBIG00000001561	LSM10	100	92.683	ENSHGLG00000011625	LSM10	100	92.683	Heterocephalus_glaber_female
ENSRBIG00000001561	LSM10	100	92.683	ENSHGLG00100001769	LSM10	100	92.683	Heterocephalus_glaber_male
ENSRBIG00000001561	LSM10	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSRBIG00000001561	LSM10	100	91.057	ENSSTOG00000000606	LSM10	100	91.057	Ictidomys_tridecemlineatus
ENSRBIG00000001561	LSM10	94	63.793	ENSKMAG00000012143	oscp1a	96	63.793	Kryptolebias_marmoratus
ENSRBIG00000001561	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSRBIG00000001561	LSM10	100	73.984	ENSLACG00000015904	LSM10	95	73.984	Latimeria_chalumnae
ENSRBIG00000001561	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSRBIG00000001561	LSM10	100	93.496	ENSLAFG00000009600	LSM10	100	93.496	Loxodonta_africana
ENSRBIG00000001561	LSM10	100	100.000	ENSMFAG00000009115	LSM10	100	100.000	Macaca_fascicularis
ENSRBIG00000001561	LSM10	100	100.000	ENSMMUG00000017338	LSM10	100	100.000	Macaca_mulatta
ENSRBIG00000001561	LSM10	100	100.000	ENSMNEG00000020023	LSM10	100	100.000	Macaca_nemestrina
ENSRBIG00000001561	LSM10	100	100.000	ENSMLEG00000025150	LSM10	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000001561	LSM10	98	63.636	ENSMAMG00000004427	oscp1a	99	63.636	Mastacembelus_armatus
ENSRBIG00000001561	LSM10	94	66.379	ENSMZEG00005026307	oscp1a	94	66.379	Maylandia_zebra
ENSRBIG00000001561	LSM10	100	70.732	ENSMGAG00000015707	LSM10	100	70.732	Meleagris_gallopavo
ENSRBIG00000001561	LSM10	98	92.500	ENSMAUG00000016624	Lsm10	98	92.500	Mesocricetus_auratus
ENSRBIG00000001561	LSM10	98	92.500	ENSMOCG00000021943	Lsm10	98	92.500	Microtus_ochrogaster
ENSRBIG00000001561	LSM10	90	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSRBIG00000001561	LSM10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSRBIG00000001561	LSM10	56	58.108	ENSMALG00000012661	oscp1a	58	58.108	Monopterus_albus
ENSRBIG00000001561	LSM10	98	91.667	MGP_CAROLIEiJ_G0026467	Lsm10	100	90.323	Mus_caroli
ENSRBIG00000001561	LSM10	98	92.500	ENSMUSG00000050188	Lsm10	100	91.398	Mus_musculus
ENSRBIG00000001561	LSM10	98	92.500	MGP_PahariEiJ_G0028798	Lsm10	100	91.398	Mus_pahari
ENSRBIG00000001561	LSM10	98	92.500	MGP_SPRETEiJ_G0027446	Lsm10	100	91.398	Mus_spretus
ENSRBIG00000001561	LSM10	100	91.870	ENSMPUG00000018593	LSM10	100	91.870	Mustela_putorius_furo
ENSRBIG00000001561	LSM10	100	87.805	ENSMLUG00000023895	LSM10	100	87.805	Myotis_lucifugus
ENSRBIG00000001561	LSM10	100	92.683	ENSNGAG00000015011	Lsm10	100	92.683	Nannospalax_galili
ENSRBIG00000001561	LSM10	94	67.241	ENSNBRG00000014306	oscp1a	94	67.241	Neolamprologus_brichardi
ENSRBIG00000001561	LSM10	100	97.561	ENSNLEG00000033754	LSM10	100	97.561	Nomascus_leucogenys
ENSRBIG00000001561	LSM10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSRBIG00000001561	LSM10	100	92.683	ENSOPRG00000001699	LSM10	100	92.683	Ochotona_princeps
ENSRBIG00000001561	LSM10	100	93.496	ENSODEG00000019161	LSM10	100	93.496	Octodon_degus
ENSRBIG00000001561	LSM10	94	67.241	ENSONIG00000020904	oscp1a	95	67.241	Oreochromis_niloticus
ENSRBIG00000001561	LSM10	100	73.171	ENSOANG00000002066	LSM10	100	73.171	Ornithorhynchus_anatinus
ENSRBIG00000001561	LSM10	100	90.244	ENSOCUG00000005333	LSM10	100	90.244	Oryctolagus_cuniculus
ENSRBIG00000001561	LSM10	94	65.517	ENSORLG00000009504	oscp1a	96	65.517	Oryzias_latipes
ENSRBIG00000001561	LSM10	94	65.517	ENSORLG00020016201	oscp1a	96	65.517	Oryzias_latipes_hni
ENSRBIG00000001561	LSM10	94	65.517	ENSORLG00015007794	oscp1a	96	65.517	Oryzias_latipes_hsok
ENSRBIG00000001561	LSM10	100	90.244	ENSOGAG00000002653	LSM10	100	90.244	Otolemur_garnettii
ENSRBIG00000001561	LSM10	98	90.909	ENSOARG00000009596	LSM10	99	90.909	Ovis_aries
ENSRBIG00000001561	LSM10	100	97.561	ENSPPAG00000023465	LSM10	100	97.561	Pan_paniscus
ENSRBIG00000001561	LSM10	100	92.683	ENSPPRG00000014619	LSM10	100	92.683	Panthera_pardus
ENSRBIG00000001561	LSM10	100	92.683	ENSPTIG00000004613	LSM10	100	92.683	Panthera_tigris_altaica
ENSRBIG00000001561	LSM10	100	97.561	ENSPTRG00000000539	LSM10	100	97.561	Pan_troglodytes
ENSRBIG00000001561	LSM10	100	100.000	ENSPANG00000023172	LSM10	100	100.000	Papio_anubis
ENSRBIG00000001561	LSM10	98	65.000	ENSPKIG00000003728	oscp1a	97	65.000	Paramormyrops_kingsleyae
ENSRBIG00000001561	LSM10	100	71.545	ENSPSIG00000000590	LSM10	100	71.545	Pelodiscus_sinensis
ENSRBIG00000001561	LSM10	62	61.842	ENSPMGG00000015718	oscp1a	99	61.842	Periophthalmus_magnuspinnatus
ENSRBIG00000001561	LSM10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSRBIG00000001561	LSM10	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSRBIG00000001561	LSM10	96	64.407	ENSPLAG00000016537	oscp1a	89	64.407	Poecilia_latipinna
ENSRBIG00000001561	LSM10	93	65.789	ENSPMEG00000000174	oscp1a	98	65.789	Poecilia_mexicana
ENSRBIG00000001561	LSM10	96	64.407	ENSPREG00000009899	oscp1a	89	64.407	Poecilia_reticulata
ENSRBIG00000001561	LSM10	100	98.374	ENSPPYG00000001539	LSM10	100	98.374	Pongo_abelii
ENSRBIG00000001561	LSM10	100	91.870	ENSPCAG00000002520	LSM10	100	91.870	Procavia_capensis
ENSRBIG00000001561	LSM10	100	91.057	ENSPVAG00000008644	LSM10	100	91.057	Pteropus_vampyrus
ENSRBIG00000001561	LSM10	94	66.379	ENSPNYG00000003138	oscp1a	94	66.379	Pundamilia_nyererei
ENSRBIG00000001561	LSM10	94	65.517	ENSPNAG00000028829	oscp1a	96	65.517	Pygocentrus_nattereri
ENSRBIG00000001561	LSM10	98	93.333	ENSRNOG00000025716	Lsm10	98	93.333	Rattus_norvegicus
ENSRBIG00000001561	LSM10	100	100.000	ENSRROG00000011414	LSM10	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000001561	LSM10	100	97.561	ENSSBOG00000036413	-	100	97.561	Saimiri_boliviensis_boliviensis
ENSRBIG00000001561	LSM10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSRBIG00000001561	LSM10	98	63.636	ENSSFOG00015019954	lsm10	99	63.636	Scleropages_formosus
ENSRBIG00000001561	LSM10	93	64.348	ENSSMAG00000001297	oscp1a	98	64.348	Scophthalmus_maximus
ENSRBIG00000001561	LSM10	95	63.248	ENSSDUG00000007090	oscp1a	95	63.248	Seriola_dumerili
ENSRBIG00000001561	LSM10	95	64.103	ENSSLDG00000000800	oscp1a	97	64.103	Seriola_lalandi_dorsalis
ENSRBIG00000001561	LSM10	100	88.800	ENSSARG00000004211	LSM10	100	90.400	Sorex_araneus
ENSRBIG00000001561	LSM10	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSRBIG00000001561	LSM10	100	88.618	ENSSSCG00000038916	LSM10	100	88.618	Sus_scrofa
ENSRBIG00000001561	LSM10	99	69.672	ENSTGUG00000001602	-	100	69.672	Taeniopygia_guttata
ENSRBIG00000001561	LSM10	99	69.672	ENSTGUG00000001600	-	100	69.672	Taeniopygia_guttata
ENSRBIG00000001561	LSM10	93	66.957	ENSTRUG00000010531	oscp1a	93	66.957	Takifugu_rubripes
ENSRBIG00000001561	LSM10	100	95.122	ENSTBEG00000016674	LSM10	100	95.122	Tupaia_belangeri
ENSRBIG00000001561	LSM10	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSRBIG00000001561	LSM10	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSRBIG00000001561	LSM10	100	91.870	ENSVVUG00000023209	LSM10	100	91.870	Vulpes_vulpes
ENSRBIG00000001561	LSM10	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSRBIG00000001561	LSM10	96	60.000	ENSXCOG00000018776	oscp1a	79	60.000	Xiphophorus_couchianus
ENSRBIG00000001561	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus